Csor.00g261670 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTACAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTGA ATGGCCGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTACAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTGA ATGGCCGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTACAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTGA MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN Homology
BLAST of Csor.00g261670 vs. NCBI nr
Match: KAG6588759.1 (hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 241 bits (616), Expect = 2.09e-80 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Csor.00g261670 vs. NCBI nr
Match: KAG6588755.1 (hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 239 bits (611), Expect = 1.21e-79 Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of Csor.00g261670 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 233 bits (594), Expect = 4.75e-77 Identity = 114/120 (95.00%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of Csor.00g261670 vs. NCBI nr
Match: XP_023522970.1 (uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 230 bits (586), Expect = 7.89e-76 Identity = 113/120 (94.17%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Csor.00g261670 vs. NCBI nr
Match: KAG6588757.1 (hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 229 bits (583), Expect = 2.26e-75 Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0
BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.28e-17 Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A0A0K3W6 (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.48e-17 Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.13e-16 Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A6J1EQ39 (uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.12e-16 Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 0
BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A6J1EI90 (uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC111434592 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.12e-16 Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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