Csor.00g261670 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g261670
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPhloem filament protein
LocationCsor_Chr11: 11201917 .. 11202279 (-)
RNA-Seq ExpressionCsor.00g261670
SyntenyCsor.00g261670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTACAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTGA

mRNA sequence

ATGGCCGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTACAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTGA

Coding sequence (CDS)

ATGGCCGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTACAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTGA

Protein sequence

MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN
Homology
BLAST of Csor.00g261670 vs. NCBI nr
Match: KAG6588759.1 (hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241 bits (616), Expect = 2.09e-80
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY
Sbjct: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120
           QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN
Sbjct: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261670 vs. NCBI nr
Match: KAG6588755.1 (hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239 bits (611), Expect = 1.21e-79
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVAQI SNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY
Sbjct: 1   MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120
           QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEK+RKLESAKLIKKN
Sbjct: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN 120

BLAST of Csor.00g261670 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233 bits (594), Expect = 4.75e-77
Identity = 114/120 (95.00%), Postives = 119/120 (99.17%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAV+DYNL+HKESFKY
Sbjct: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120
           +SIKCGWFMELKGEDLA+RLHI VKDCLGRIFEL+VVVSEKKTCAEKIRKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261670 vs. NCBI nr
Match: XP_023522970.1 (uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230 bits (586), Expect = 7.89e-76
Identity = 113/120 (94.17%), Postives = 115/120 (95.83%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVA IASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY
Sbjct: 1   MAVVAHIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120
           +SIKCGWFMELKGEDLAF LHI VKDCLGRIFELDVVVSEKK C EK+RKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAFHLHIEVKDCLGRIFELDVVVSEKKACGEKVRKLESAKLIKKN 120

BLAST of Csor.00g261670 vs. NCBI nr
Match: KAG6588757.1 (hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229 bits (583), Expect = 2.26e-75
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVAQ+A NDPISQLKIDGCLICPSKWIQIPDVSEVCVQN+AKFAV+DYNL+HKESFKY
Sbjct: 1   MAVVAQVALNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNVAKFAVEDYNLVHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120
           +SIKCGWFMELKGEDLA+RLH+ VKDCLGRIF LDVVVSEKKTCAEKIRKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAYRLHVEVKDCLGRIFVLDVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.28e-17
Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 0

Query: 27  KWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKD 86
           KWI+IPDV+  C+Q +AKFAV+ +N  H +   Y SI  GW++EL   +L +RLHI   D
Sbjct: 16  KWIKIPDVNGHCLQQVAKFAVEKFNAEHGDCLIYNSIFEGWYLELGSNNLKYRLHIKAVD 75

Query: 87  CLGRIFELDVVVSEKKTCAEKIRKLESAKLI 117
            LGR+   +VVV E+K   E+IRKL S  +I
Sbjct: 76  FLGRLLIYEVVVFEEKPDKERIRKLISFVII 106

BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A0A0K3W6 (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.48e-17
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 28  WIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKDC 87
           WI+IPDV + CVQ+ AK+AV ++N I  +   Y S   GW+ E+    + F+LHI  K+C
Sbjct: 109 WIKIPDVKKSCVQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKEC 168

Query: 88  LGRIFELDVVVSEKKTCAEKIRKLESAKLIK 118
           +GR+ +   VV E+K   EKI+KLE   LI+
Sbjct: 169 IGRVRDYIAVVKEEKPLTEKIKKLEDFYLIR 199

BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.13e-16
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 27  KWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKD 86
           KWI+IPDVS  CVQ +AK AV+ +N+ H  S KY+SI  GWF EL   +L +RLHI   D
Sbjct: 16  KWIKIPDVSSHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWFCELGQNNLKYRLHIRAID 75

Query: 87  CLGRIFELDVVVSEKKTCAEKIRKLES 113
            L R    + +V E+K   E+IRKL S
Sbjct: 76  FLQRSLLYEALVFEEKPKLERIRKLIS 102

BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A6J1EQ39 (uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.12e-16
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 16  LKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGED 75
           +K+ G +    KWI+IPDVS  CVQ +AK AV+ +N+ H  S KY+SI  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 76  LAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLES 113
           L +RLHI   D L R    + +V E+K   E+IRKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

BLAST of Csor.00g261670 vs. ExPASy TrEMBL
Match: A0A6J1EI90 (uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC111434592 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.12e-16
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 16  LKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGED 75
           +K+ G +    KWI+IPDVS  CVQ +AK AV+ +N+ H  S KY+SI  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 76  LAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLES 113
           L +RLHI   D L R    + +V E+K   E+IRKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6588759.12.09e-80100.00hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588755.11.21e-7998.33hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588758.14.75e-7795.00hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023522970.17.89e-7694.17uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo][more]
KAG6588757.12.26e-7591.67hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1EIQ82.28e-1748.35uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A0A0K3W69.48e-1743.96Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=4 SV=1[more]
A0A6J1ELQ91.13e-1650.57uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1EQ392.12e-1645.92uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1EI902.12e-1645.92uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 23..117
e-value: 3.4E-8
score: 35.5
NoneNo IPR availablePANTHERPTHR47116:SF5PHLOEM FILAMENT PROTEINcoord: 25..118
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 28..112
IPR009994Phloem filament PP1PFAMPF07430PP1coord: 38..113
e-value: 1.1E-23
score: 83.1
IPR027214CystatinPANTHERPTHR47116PHLOEM FILAMENT PROTEINcoord: 25..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g261670.m01Csor.00g261670.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity