Csor.00g261260 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCATCGCCATAATTTGTTTGTTTCTTCAAATGGGTCTGTGGAATCTGGCTGGACTGTGTACTTGGAGGATTCCTCGTCCATGTTTACTCCAAGAATTCAAAATGAAGAACTGGATTTGTCTATGCTTTCTGATGCTTCTTCTGGGCCTCCAATTTTCCGGGAAAATGAACCTGTTTTCCCGGAAAATGAATCTGGTCGGTGCTTTTGTGATACAACGCCCACACTTTTCCCGAAAGGTAGCCGGAAAATGAAGGGCGGTGACGGCCGACGGCGGCCGGAGCAAACGGCGTCGTTTCTTGATGACACTGCTAGCTCTGATCCCAACTTCAACTTCCATAATTCGGTAGAGAATTTATAAAGTTTTATTTAATTTTTAAAATTTGAAATTATTTTGATTAATTTTGGTTTAAAATTCAGGAGAGCTCAACCAGCTGCCAAAACCGATCTGGAAATCAAAGGCAGAAGAATCAGTTAAGCCAATTTAGAACGTTTAGAACGTTTTGAGTATATTCGAAGTTCAAGAGTATAATTAAAATATCGAAAGATACCACGTTTTATATCGATTTTCATTCAAATATTTATGGTTTAGTTCTAAACTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCCGCTTCTACTTAATGTAGGCAGATCAACAGGAAGAGATCGGGATTGAAGTAG ATGGATCATCGCCATAATTTGTTTGTTTCTTCAAATGGGTCTGTGGAATCTGGCTGGACTGTGTACTTGGAGGATTCCTCGTCCATGTTTACTCCAAGAATTCAAAATGAAGAACTGGATTTGTCTATGCTTTCTGATGCTTCTTCTGGGCCTCCAATTTTCCGGGAAAATGAACCTGTTTTCCCGGAAAATGAATCTGGTCGGTGCTTTTGTGATACAACGCCCACACTTTTCCCGAAAGGTAGCCGGAAAATGAAGGGCGGTGACGGCCGACGGCGGCCGGAGCAAACGGCGTCGTTTCTTGATGACACTGCTAGCTCTGATCCCAACTTCAACTTCCATAATTCGGAGAGCTCAACCAGCTGCCAAAACCGATCTGGAAATCAAAGGCAGAAGAATCAGCAGATCAACAGGAAGAGATCGGGATTGAAGTAG ATGGATCATCGCCATAATTTGTTTGTTTCTTCAAATGGGTCTGTGGAATCTGGCTGGACTGTGTACTTGGAGGATTCCTCGTCCATGTTTACTCCAAGAATTCAAAATGAAGAACTGGATTTGTCTATGCTTTCTGATGCTTCTTCTGGGCCTCCAATTTTCCGGGAAAATGAACCTGTTTTCCCGGAAAATGAATCTGGTCGGTGCTTTTGTGATACAACGCCCACACTTTTCCCGAAAGGTAGCCGGAAAATGAAGGGCGGTGACGGCCGACGGCGGCCGGAGCAAACGGCGTCGTTTCTTGATGACACTGCTAGCTCTGATCCCAACTTCAACTTCCATAATTCGGAGAGCTCAACCAGCTGCCAAAACCGATCTGGAAATCAAAGGCAGAAGAATCAGCAGATCAACAGGAAGAGATCGGGATTGAAGTAG MDHRHNLFVSSNGSVESGWTVYLEDSSSMFTPRIQNEELDLSMLSDASSGPPIFRENEPVFPENESGRCFCDTTPTLFPKGSRKMKGGDGRRRPEQTASFLDDTASSDPNFNFHNSESSTSCQNRSGNQRQKNQQINRKRSGLK Homology
BLAST of Csor.00g261260 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04 Identity = 44/131 (33.59%), Postives = 55/131 (41.98%), Query Frame = 0
BLAST of Csor.00g261260 vs. NCBI nr
Match: KAG6588718.1 (hypothetical protein SDJN03_17283, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 291 bits (746), Expect = 1.86e-99 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Csor.00g261260 vs. NCBI nr
Match: XP_022927878.1 (uncharacterized protein LOC111434644 isoform X2 [Cucurbita moschata]) HSP 1 Score: 288 bits (736), Expect = 6.24e-98 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Csor.00g261260 vs. NCBI nr
Match: XP_022927877.1 (uncharacterized protein LOC111434644 isoform X1 [Cucurbita moschata]) HSP 1 Score: 281 bits (719), Expect = 3.00e-95 Identity = 142/150 (94.67%), Postives = 143/150 (95.33%), Query Frame = 0
BLAST of Csor.00g261260 vs. NCBI nr
Match: XP_022988989.1 (uncharacterized protein LOC111486186 isoform X2 [Cucurbita maxima]) HSP 1 Score: 277 bits (709), Expect = 8.48e-94 Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0
BLAST of Csor.00g261260 vs. NCBI nr
Match: XP_023531126.1 (uncharacterized protein LOC111793463 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277 bits (708), Expect = 1.20e-93 Identity = 140/144 (97.22%), Postives = 140/144 (97.22%), Query Frame = 0
BLAST of Csor.00g261260 vs. ExPASy TrEMBL
Match: A0A6J1EMA0 (uncharacterized protein LOC111434644 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434644 PE=3 SV=1) HSP 1 Score: 288 bits (736), Expect = 3.02e-98 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Csor.00g261260 vs. ExPASy TrEMBL
Match: A0A6J1EIF1 (uncharacterized protein LOC111434644 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434644 PE=3 SV=1) HSP 1 Score: 281 bits (719), Expect = 1.45e-95 Identity = 142/150 (94.67%), Postives = 143/150 (95.33%), Query Frame = 0
BLAST of Csor.00g261260 vs. ExPASy TrEMBL
Match: A0A6J1JN42 (uncharacterized protein LOC111486186 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486186 PE=3 SV=1) HSP 1 Score: 277 bits (709), Expect = 4.10e-94 Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0
BLAST of Csor.00g261260 vs. ExPASy TrEMBL
Match: A0A6J1JNX8 (uncharacterized protein LOC111486186 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486186 PE=3 SV=1) HSP 1 Score: 271 bits (692), Expect = 1.97e-91 Identity = 140/151 (92.72%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of Csor.00g261260 vs. ExPASy TrEMBL
Match: A0A1S3C0Q6 (uncharacterized protein LOC103495318 OS=Cucumis melo OX=3656 GN=LOC103495318 PE=3 SV=1) HSP 1 Score: 150 bits (380), Expect = 1.16e-43 Identity = 96/172 (55.81%), Postives = 114/172 (66.28%), Query Frame = 0
BLAST of Csor.00g261260 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05 Identity = 44/131 (33.59%), Postives = 55/131 (41.98%), Query Frame = 0
BLAST of Csor.00g261260 vs. TAIR 10
Match: AT1G58460.1 (unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.3e-04 Identity = 37/104 (35.58%), Postives = 53/104 (50.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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