Csor.00g260660 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCGATATGGAGCCACACTGGCGCGCCAGACGCCTTGCATTTTGTCATCGCCGTCCAGTTCGCCTTCGGCTTTTACGCTGCGAGGTTCCTACTCGACAGATTCATTTTTCGTGTGAGTTTTCAAATTACATTTGTTTTCTACTTTTCATTTGCTCTTCTGTAGTGCAATTTTGTTTCTCACTTGCCTTTTGTTTTTGTCTGTGTGCGGGTGATTTATGTATGGATTCTGATAATTCGTTTTAAGAACGTCGTATATGTGCGTTTAGGTAGCAATTTGAATATCTTGTCTGTTATTCACCTAATAATTGTTTCTAACTTTTTTGTGACGGCGGAAAATATGAAAAATTGAAGATGAGATGGAAAACTTTTAATGTCTCTACTTGTTCTACTTGCATTTATTTTCTTCACATTAAGAACGCCGTACTCGATCTTTTCTCGCTCGGTTATGATTTTCTGGTGAATTTCAAATACTTTTTTTGTACTGAACTTAATAGGTGGTGTTTTCAACATCTACTTAGTTTGGTCGTCATATTATAGAGCACCTGGTGGCACTGCCCCGCTGACTTAACCAGACACGAAATATTCATTATTAAATGATAGGTATCAGGATTTGTTGCAATTATTTTCAATGAAGACGTGTGGATGTTAACATCTTTATTAAGCAAGGAGTTCGGTTGGTCATCATGATGAAATGTTAGAAATTCTACCTTTGTCATGGTAGCCAAATTTCAGATGGCATCCAATTCCAACATCAAAAATGGATGTAATAGAAAAAGATTTTTTACTAGCTTTTATTTAGGGCAGTGCAGAACAGGAATAGAGGCATAAAAAAAGAGAGGCTAAAGGGAAACATTGAAGGGGTTAGGCTCCAAACCTCCTCCCACCAATGACAATTGTCCTCAAAGATCATTCAAATCCTTTTAAGCAACAACTTTAAAACTTCTGGAAAATTGCATGCCAGTGAAATCTTCCACAAGTGGAGTTGACTAGGATTTGCTGCCACGTCTCTATAGAACTACAATCTAGCCCAAGTATTGGCGGAAAAGGGCAACACCAGATAAATTATTCCAATGTTTTGTGGTCTACTTATAAAGAATACAACTATGTTAAAGAAAAAATGGTTGAGGGTTGATCTCTAGATTGTGTGGAAAGTGATTATTCTCCTACCTTCTAAGGTATTCTCGCTGTTCAACTTATGGAAAAAGATCATTGTATTTGACCAGGAAGATGTCTAATTCGCGAAGGCCAACTGATAAAGTGGCTGGAAAAAATTGCGGAGTAATTCCCAAGTTGGCGATTGTGATGGCAGCATCTTGTCCTTAAGTGTCCTTCTTCTTTTTGTGATTCAGGACAGTATACTGCCTCAACTTGGAGTGCTCAGCATAGGTTGTTTCGTAATTACTCCATTGGCACCATCATTTTAGATTGGAAGGTCATTCGATAATCCTTCCTTTGGAAAAAGGATGCCTTATCCTTTTGTCCCGTAGATTGCTTTGTTGCCTTTGGTCTTCTGTGTAAGAGGACTCACATTGTTATAGACGTAAAAATGCAATTGGAAAAACAAATGCACACTGTAGAGCTTCTCTTTGGAGCTCCTTTTCCAAAGCATTTTTTTCTCGGTTGTACTTATAAAATGAAGTATCCAGGCTCCGCTTAGAAAAATGTGGCTACGGTTTTTGTTGTCACTGCCAATTGGAGAAACTTTTTTTTTCTTTTTTTTTTTGTAATCTTCAGAACTTTGTGGGCATCCTTATAACCCTTTTTCTACTTGGTTCTTTTGTGTTGTCAATAAGATTTCTCTGTACTTATTAAGAAAGGGGAACTAATTATGTTATTCAACTTGTCCTATTTTTAGAGGTTCGCAATTTGGCTGTTGAGCAAAGGAGCTGCTCCGCTGAAACTTGATGAGGCTACCCAGTCAAAGGTTGTAAAATGTTCGGAATCAATGTGGAAACTAGCATACTATGGTACTGTTGAAATATGCATTTTAAAAATTGCATATAATGAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATCAGGAGTTGCAGTGAGTAGTTTACATGCTTTGTTGTTAATTTTATTGATGAACTTCATCTTTGCGTCAAGGATCAGATCTAACTTGCTGTGTTGATAATATTGATAGAAATTCTTGAAGTCGGTCGATGTCCTCTTCTATCTAGATTACTCCTCAATAATTTTTTAGCTTTTTTTCCTTTTTTTTTCATTTGTGCATTTGGGCTCTTTTCTCCATTCTTCTTCTTCCTTGGTACGGCAACTTTAATAGTAAGAAGTTGAAATTTATACTTCTAACTTCAGTGTATTAGTACTCCTAAGGTATACATTCAAATGGATTAAAGATTTTTGTTTTGTATGAACTGATCCCTTTCATTTCTTTCTGCAGGCTTCCTCTAAAACTATTCTATATGTGCCAATGTGGGTTCTACTTATATAGCATTGCTGCTCTTCTTATATGGGAGACTCGGAGAAAGGACTTCTCTGTCATGATGTCTCATCATGTAATTACTGTTATCTTGATCGGATATTCATATATGACGAGGTATTCTTAAAGTTCCTTTATACAAGTTCAACATAGCTAGTAATATTTAATTATAACTAGAGATGTGTTGATTGCTGTTCTACTGATTGGGAAAGTCATGCCAGAGTCTGTTTCCTACTTGTGCTTTCATGATCGTAGTTACTTATATTGCTGCTGGGCTTCTTTTTTTTTTTTTTCCTTTTTCATTGGAGAAAGTTTTCCACCAGTCTTAAGACCTTGTAACTTTTGATACAGAATAGGTCAAAGATTCAAAGCTGTGATTGTTGAAGTCTATTAGAATTATTGCATTAGAGCAAATGTTACTTTGTGGCCTATTCTCTCTCTCTCTCTCACTTTCTCAAATTAATTTTCGTATGATACTGATCCGTTGATTTGAGTACTTCTAGAAGCACTGTATTTATTTTTCAATGGAATCGTTTCAGATGATTTATATATTTGGTTCAAATTAGTATTTCATTTCTACCGTTTATTTTGGCATTTATCATTCTAGTATCCATTGATAATATGATGGAAACCTCTTGAATTGAAGTTGATTCTTTGAAAATCCTGCATTCTTATGATTGTCTTGTGATATGAATGCCCATTAGAAAGAAATTAGGGATATTATACTGGTATATTAGTAAATAGCAGAGAGTTAATTATGGTATTTGGTTATAAATAGAGTGGAAAAGGGGGAAGTTGAGCAAGATTCAGTGAGTTTGGTTTAGCGCTTGAGTGAGAATGCTCAAGAAAGGGAAGTTCAAAGTACCTCAGTTTTCAAATCCTTGGTTATCTTGTAGATTTTGTTATCTTTGCCTTGCAATATATTTTGAGTTCTACATCTTGCTTAGCTGATTATGTGTTGGGTTTGTATACGGTTATTAGGAGATTGAATTGTGCTGTTTAACATAGTTTGGAGGACAACGGTCTTATTGTATATCATTTAATATAACATTTGAGCATGATATCAGAACATAGATATGTCTATCCGAGTCTAAATGTCTTGTTTTAACTTCTTCTTTTTTTTTTTTTATCGGTATCTTACACAGTTTTTCATTTTTCTTAAAAACTAGACAAAGTTAAAGCATTTCCATTCAAATTTTGATAAAAGGATGGTTGTTCCTTTTTCTGGATTTGATTGTAGACCTGATGATAATTAATAATAACCCATTTACGGGAATATAAATATCATGGTGCCATTTAGTATCATGAATGATTTAGGGAGTTATTGAAGAATGGAAATTATTTGAAGTTTCCCTACTTGAGTTGGTTTTTCTTGACCCATTTACGGGAATATAAATATCATGGTGCATTTAGTATCATGAATGATTTTTAGGGAGTTATTGAAGTATGGAAATTATTTGAAGTTTCCCTACTTGAGTTGGTTTTTCTTTTTATCTTTTTTCTTTTAAAAAAACCTTACTTGGATTGAAAGAAAGTCAAACAGAAGTCTTCTGATGTTTTTTGGGATAATGTACCCACCTTATAGCTCAATTTGGGGCTCCGCGAGATCTTTAGGATGTAACCCTCTTTTTTATTTAATTATGTTGCACTGTAACCATGTGTGAAAGTTACTCACATATTTGCAAACTTTATATTTGTTTATTTATGGGTCAAATTGTTGTTTTAAAGCCTCATCTGAACCTTCCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTGAGTATGTCACCAAAAATTGCTAGACTCTTCTTTCTTTCTCAGCATTTCTTATGATGGAAGTCTAGACTGATTAAACTAATAGATGACATTTTAAATCAGGATTTTTGTACTCAATTCTGCAGATTTTTCCAGATTGGATCGGTTATTCTTGCCCTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAAAAAGAACTCGGAGCAAGTGTTTTCTTTGGATTTTTTGCTGTTACATGGCTCGTATTGCGGCTTATATTCTTCCCATTCTGGGTTATAAAAGCAACAAGGTTTGTGCTCCTGGTGTTTGTTTTTATCTTTGAAGATTTGTGTGTATCCACACTCTTTTGCTCATCTGATTTTGTGATTGATACTTCTCAGCTATGATCTCTGTGAGTACTTGAAGCTATCAGATGCGAATTCCAGATTGATATACTATGTTTTCAACACGATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTGCTCATATGCTCCATGATCCATAGACAGCTGAAAAATAGGGGAAAAGTTGGAGAGGATATAAGATCTGGTGTGTAACTTTACTCATCCACTAAAAGTTTCTCGTTGATCAAATAGGAAAAGGGGAGCCCTCCCACAAGTCCCGTCTGTTTTAGATTTATGTATGATAATTTCCTACAAGTCACTGGTACCTTTTGTGTTATGCATCTAATTTCATTTTTCATAAATGAAAAGAGTTTCATCTGCATGATTCATATTAGCCTAAAAAGAACTTCATTAAAAACAGCTTCAAACAGGCCCTCGAGCTTTAAGCAAATATCATGGTTAATTTTATAATGAGTTTTAGATTCAGAAAAGTATATTGAATGTACAGGATAACTGCTTAGTTTCAATTTTCTGGTTTTCTTTATTCAAATGGGTAAGTAATGCAATGGTTGTAACTGATGTTCAAATTTTTCTCTTGTATTTTCTTTACAGATTCGGAGGATGACGATTAG ATGGACTCGATATGGAGCCACACTGGCGCGCCAGACGCCTTGCATTTTGTCATCGCCGTCCAGTTCGCCTTCGGCTTTTACGCTGCGAGGTTCCTACTCGACAGATTCATTTTTCGTAGGTTCGCAATTTGGCTGTTGAGCAAAGGAGCTGCTCCGCTGAAACTTGATGAGGCTACCCAGTCAAAGGTTGTAAAATGTTCGGAATCAATGTGGAAACTAGCATACTATGGTACTGTTGAAATATGCATTTTAAAAATTGCATATAATGAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATCAGGAGTTGCAGCTTCCTCTAAAACTATTCTATATGTGCCAATGTGGGTTCTACTTATATAGCATTGCTGCTCTTCTTATATGGGAGACTCGGAGAAAGGACTTCTCTGTCATGATGTCTCATCATGTAATTACTGTTATCTTGATCGGATATTCATATATGACGAGATTTTTCCAGATTGGATCGGTTATTCTTGCCCTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAAAAAGAACTCGGAGCAAGTGTTTTCTTTGGATTTTTTGCTGTTACATGGCTCGTATTGCGGCTTATATTCTTCCCATTCTGGGTTATAAAAGCAACAAGCTATGATCTCTGTGAGTACTTGAAGCTATCAGATGCGAATTCCAGATTGATATACTATGTTTTCAACACGATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTGCTCATATGCTCCATGATCCATAGACAGCTGAAAAATAGGGGAAAAGTTGGAGAGGATATAAGATCTGATTCGGAGGATGACGATTAG ATGGACTCGATATGGAGCCACACTGGCGCGCCAGACGCCTTGCATTTTGTCATCGCCGTCCAGTTCGCCTTCGGCTTTTACGCTGCGAGGTTCCTACTCGACAGATTCATTTTTCGTAGGTTCGCAATTTGGCTGTTGAGCAAAGGAGCTGCTCCGCTGAAACTTGATGAGGCTACCCAGTCAAAGGTTGTAAAATGTTCGGAATCAATGTGGAAACTAGCATACTATGGTACTGTTGAAATATGCATTTTAAAAATTGCATATAATGAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATCAGGAGTTGCAGCTTCCTCTAAAACTATTCTATATGTGCCAATGTGGGTTCTACTTATATAGCATTGCTGCTCTTCTTATATGGGAGACTCGGAGAAAGGACTTCTCTGTCATGATGTCTCATCATGTAATTACTGTTATCTTGATCGGATATTCATATATGACGAGATTTTTCCAGATTGGATCGGTTATTCTTGCCCTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAAAAAGAACTCGGAGCAAGTGTTTTCTTTGGATTTTTTGCTGTTACATGGCTCGTATTGCGGCTTATATTCTTCCCATTCTGGGTTATAAAAGCAACAAGCTATGATCTCTGTGAGTACTTGAAGCTATCAGATGCGAATTCCAGATTGATATACTATGTTTTCAACACGATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTGCTCATATGCTCCATGATCCATAGACAGCTGAAAAATAGGGGAAAAGTTGGAGAGGATATAAGATCTGATTCGGAGGATGACGATTAG MDSIWSHTGAPDALHFVIAVQFAFGFYAARFLLDRFIFRRFAIWLLSKGAAPLKLDEATQSKVVKCSESMWKLAYYGTVEICILKIAYNEPWFRDSNQYFKGWPNQELQLPLKLFYMCQCGFYLYSIAALLIWETRRKDFSVMMSHHVITVILIGYSYMTRFFQIGSVILALHDASDVFMEAAKVFKYSEKELGASVFFGFFAVTWLVLRLIFFPFWVIKATSYDLCEYLKLSDANSRLIYYVFNTMLLMLLVFHIYWWLLICSMIHRQLKNRGKVGEDIRSDSEDDD Homology
BLAST of Csor.00g260660 vs. ExPASy Swiss-Prot
Match: Q9LJK3 (Ceramide synthase LOH2 OS=Arabidopsis thaliana OX=3702 GN=LOH2 PE=1 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-112 Identity = 196/295 (66.44%), Postives = 240/295 (81.36%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy Swiss-Prot
Match: Q84QC0 (ASC1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0264000 PE=2 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 7.5e-94 Identity = 166/273 (60.81%), Postives = 213/273 (78.02%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy Swiss-Prot
Match: Q6NQI8 (Ceramide synthase 1 LOH3 OS=Arabidopsis thaliana OX=3702 GN=LOH3 PE=1 SV=2) HSP 1 Score: 253.8 bits (647), Expect = 2.3e-66 Identity = 135/293 (46.08%), Postives = 187/293 (63.82%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy Swiss-Prot
Match: Q9LDF2 (Ceramide synthase LOH1 OS=Arabidopsis thaliana OX=3702 GN=LOH1 PE=1 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 8.1e-64 Identity = 133/295 (45.08%), Postives = 182/295 (61.69%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy Swiss-Prot
Match: Q6EUN0 (ASC1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0581300 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 9.0e-63 Identity = 134/291 (46.05%), Postives = 181/291 (62.20%), Query Frame = 0
BLAST of Csor.00g260660 vs. NCBI nr
Match: KAG6588659.1 (LAG1 longevity assurance-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 576 bits (1485), Expect = 2.41e-207 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
BLAST of Csor.00g260660 vs. NCBI nr
Match: XP_022927943.1 (LAG1 longevity assurance homolog 2-like [Cucurbita moschata] >XP_023530121.1 LAG1 longevity assurance homolog 2-like [Cucurbita pepo subsp. pepo] >KAG7022446.1 LAG1 longevity assurance-like 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 575 bits (1482), Expect = 6.92e-207 Identity = 287/288 (99.65%), Postives = 288/288 (100.00%), Query Frame = 0
BLAST of Csor.00g260660 vs. NCBI nr
Match: XP_022988873.1 (LAG1 longevity assurance homolog 2-like [Cucurbita maxima]) HSP 1 Score: 566 bits (1459), Expect = 2.22e-203 Identity = 283/288 (98.26%), Postives = 285/288 (98.96%), Query Frame = 0
BLAST of Csor.00g260660 vs. NCBI nr
Match: XP_022136346.1 (LAG1 longevity assurance homolog 2 [Momordica charantia]) HSP 1 Score: 555 bits (1430), Expect = 5.85e-199 Identity = 274/288 (95.14%), Postives = 283/288 (98.26%), Query Frame = 0
BLAST of Csor.00g260660 vs. NCBI nr
Match: XP_038888555.1 (LAG1 longevity assurance homolog 2 [Benincasa hispida]) HSP 1 Score: 546 bits (1407), Expect = 1.88e-195 Identity = 270/288 (93.75%), Postives = 279/288 (96.88%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy TrEMBL
Match: A0A6J1EMG2 (LAG1 longevity assurance homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111434695 PE=4 SV=1) HSP 1 Score: 575 bits (1482), Expect = 3.35e-207 Identity = 287/288 (99.65%), Postives = 288/288 (100.00%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy TrEMBL
Match: A0A6J1JNK6 (LAG1 longevity assurance homolog 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486095 PE=4 SV=1) HSP 1 Score: 566 bits (1459), Expect = 1.08e-203 Identity = 283/288 (98.26%), Postives = 285/288 (98.96%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy TrEMBL
Match: A0A6J1C397 (LAG1 longevity assurance homolog 2 OS=Momordica charantia OX=3673 GN=LOC111008054 PE=4 SV=1) HSP 1 Score: 555 bits (1430), Expect = 2.83e-199 Identity = 274/288 (95.14%), Postives = 283/288 (98.26%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy TrEMBL
Match: A0A1S3BZU3 (LAG1 longevity assurance homolog 2 OS=Cucumis melo OX=3656 GN=LOC103495235 PE=4 SV=1) HSP 1 Score: 542 bits (1396), Expect = 4.48e-194 Identity = 269/287 (93.73%), Postives = 277/287 (96.52%), Query Frame = 0
BLAST of Csor.00g260660 vs. ExPASy TrEMBL
Match: A0A6J1GMN8 (LAG1 longevity assurance homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455365 PE=4 SV=1) HSP 1 Score: 541 bits (1395), Expect = 6.13e-194 Identity = 267/288 (92.71%), Postives = 278/288 (96.53%), Query Frame = 0
BLAST of Csor.00g260660 vs. TAIR 10
Match: AT3G19260.1 (LAG1 homologue 2 ) HSP 1 Score: 406.8 bits (1044), Expect = 1.5e-113 Identity = 196/295 (66.44%), Postives = 240/295 (81.36%), Query Frame = 0
BLAST of Csor.00g260660 vs. TAIR 10
Match: AT1G13580.2 (LAG1 longevity assurance homolog 3 ) HSP 1 Score: 253.8 bits (647), Expect = 1.6e-67 Identity = 135/293 (46.08%), Postives = 187/293 (63.82%), Query Frame = 0
BLAST of Csor.00g260660 vs. TAIR 10
Match: AT1G13580.3 (LAG1 longevity assurance homolog 3 ) HSP 1 Score: 253.8 bits (647), Expect = 1.6e-67 Identity = 135/293 (46.08%), Postives = 187/293 (63.82%), Query Frame = 0
BLAST of Csor.00g260660 vs. TAIR 10
Match: AT3G25540.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein ) HSP 1 Score: 245.4 bits (625), Expect = 5.8e-65 Identity = 133/295 (45.08%), Postives = 182/295 (61.69%), Query Frame = 0
BLAST of Csor.00g260660 vs. TAIR 10
Match: AT1G26200.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein ) HSP 1 Score: 221.1 bits (562), Expect = 1.2e-57 Identity = 127/298 (42.62%), Postives = 177/298 (59.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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