Csor.00g260480 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g260480
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionembryo defective 1273
LocationCsor_Chr11: 10102663 .. 10105836 (+)
RNA-Seq ExpressionCsor.00g260480
SyntenyCsor.00g260480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGAGTAAGCTCGACCACCCTTTCTTCTATTTCTCTCTTTTTCAAGTATTTTTGTGAAGGCTGAGTTTATGTGTGGGATTTTGGGCGCTCGGTTTCTAGCTTTTTAGAATGCATTTGTTTTGTTTCTCAATGTGGATGAAATTTGTTGTGTAATTGGCAAATCATGTTGGTTAAATTGGTGGAACAACCTTCTTGTGAATTTCTGGGTGATGTTGATTAATTGGAAAATGCTATTTGGTGGTAAATTCTGTTGCTGTGATGGCTGAATGCCTCTACATTAATGGGTATGGGTATGAACTTATCTGTTTTAGCCTCTCATAGCATTGAAAGAAGCGAGGAGCTATTTAAGAGGGAAGAGTAGGCAAGACTGTAGTTATCTTCGAGGTAACATAAGCGGAAACAAGATCGATTGCACTCTCACACACACGAACATAAATGAACAAAGAGACACAACGACTTAAGTGGTTAAGAGAGAAAAAATTCTCCTATATCCACGGGTGGTAGGCAATTACTATAATCAAAGTGTTTACAAATGTACCTCTCACACTCTCACACTCTACACTACGACGTCTCACTTACAAAGTTCCTCCCAACTGCCTCTAGGCAAATACAAAATGGCAATGACTTCACATCCTAGAACAATGCTAGAAAAACCTTTATAGAGGCATAGCAATACTAATTTTCATGCATGAATCGAAGCAACACTAATGGTCATACATGAATCAAGATGATTCATGTACCAATATCGAATATGAACCAAATGAATCCAATAGATTCATGAATAGAAGTGAGCAATGTACCAAAAATATTCATGAATCCATGTATTCATGAACCAAATCTTTATGACAATTCTCAACATAGCTTGTTGGCTTAAAATTTTGGGTGTTTTATTGAATGTAATCATAAAGTAGGGGCTATGAGTTCAAACTACTACCATGGTAGTTCCTCTTTATTCCATACTAATAGTCTATGCATGTAAACATAGTTCAGCTTGTTAATATATGTTCAATCAAAATGTCAGAGGTTTGAATCCTCTCACCCACCCAGGATGAACTTTAAACAAAAAAAGGACTATGCATTGAACTTCATGACTTGAATAATATCCAAGTTGAGGCTTGAATGCGTGAGTTAGATGATTGAGAATATATGAAATCATTAAATTTACTGGATGCGGTGGTGCTTTAGTCAATGAAGAATGGAAATGATATTCGGCCTTTAAATTTTAGCTTATGCAGTGTTTAACATTTGTGTGAGGGATTTTCATTTTTGTTTTAATGGATTTTCCACAACTCTAGTTCATTGTTGAACGAACTTGATGCCAATTGCTTACACTGTTTCCTTTTCTTTTTTATAATTCCTATTCTTTCAACTTAATCGTTCTATCCAAATTTATAATGTACGATTTTTGTTCTTATTGTAGGTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCACATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAGGACAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGCTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTCATCAAATACTTGAGCATACCATTGCTCGCCGTCACCTCTCTCAGCGAGATGTCCTATTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCATTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGGTAAGGTTTCAGCATCATCGCTCCATTACGTGTGACACGTTAGTTGAATGAATCATAATGATAGTTCATTGACAAAGCATTGGTCTCATATCCTCCATTTTAGCTCTGCTTTTATATCGCCCTTGGGTTGACAACATTTTCTACTGTTTCTGGATTGATTACATAACTATATTTGCACATGATGCAATCGAAAACAATAAATATGTTGCTTTAATCATGCTGTTGAATTTTAATCTTACGTTAGTTGAAAAAAACATCAATTGTCTGATTTAGCACTTTGTTGTTTCTTTTACGTGTTCGCTCAGTCACTTTTCTTATTGTTCTTTTACTTTTAACACTCATTGATGTTCTTAGTTGTCTTTGTAGTATTCTTCATTTCGAACGATAATTTTTGAAATAATGTTAGCTGGGAATGTTCGAACACAGTTCAGTAGTCTTCCCGTTGCTCATTTTTATTTTGAAACACACTCCTGAGCTTATCCTTCAGTAGAAATACAATATAAAGAGCTGTTTAAAGAACTCCTTGATGTTCTTAGTTGTCCTTGTAGTATTCTTCATTTTGAACGATCGTTTTCGAAATTTGGTTAGCTGGGAATGTTTGAACACAGTTTAGTAGTCTTCCTGTTGCTCATTTTTATTTGAAACACACTCCTGAGCTTGTCCTAGAGTAGAAATACAATATGAAGAGCTGTTTAAAGAACTCCTTGATGTTCTTAGTTGTCTTTGTAGTATTCTTCATTTTGAACGATCATTTTCGAAATTCGGTTCCCTGGGAATGTTTGAACACAGATTAGTAGTCTTCCTGTTGCTCATTTTTATATTGAAACACACTCTGGATCTTGTTCTTCAGTAGAAATACAATATAAAGAACTGTATAAAGATCTCGATTGATTTCTAGTTTCCTGTGAATTCTACTGAACATTTCTTGTCGATTCATTTATAGTTGTCTTCCTTTTTCCTTTCTATGATTCAGGATCTAGAAGTACCATGGCATTTGATCACAATTGCTCTGTTCTTCACACTCATTAAACTGCCTGGCCCATACTACCCATATTGGGGACGCATATTCCTTCCCCATTTTGCAAATGGGGGTTTGTTGAGAACAGTATGGTCTATGTTTCTCTGGTTTCGAAGACCTCGAAAGACATCGATGTTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAATCGAGCAGGCTCCAAGAACATTGGAGGAGCAGCCTAGAAAGTTTCAGATGAATTATCCAGAACGAAGTGAGTGA

mRNA sequence

ATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGAGTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCACATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAGGACAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGCTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTCATCAAATACTTGAGCATACCATTGCTCGCCGTCACCTCTCTCAGCGAGATGTCCTATTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCATTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGACCTCGAAAGACATCGATGTTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAATCGAGCAGGCTCCAAGAACATTGGAGGAGCAGCCTAGAAAGTTTCAGATGAATTATCCAGAACGAAGTGAGTGA

Coding sequence (CDS)

ATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGAGTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCACATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAGGACAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGCTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTCATCAAATACTTGAGCATACCATTGCTCGCCGTCACCTCTCTCAGCGAGATGTCCTATTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCATTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGACCTCGAAAGACATCGATGTTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAATCGAGCAGGCTCCAAGAACATTGGAGGAGCAGCCTAGAAAGTTTCAGATGAATTATCCAGAACGAAGTGAGTGA

Protein sequence

MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTSLSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKTSKDIDVAEAERESPRYTEELIEQAPRTLEEQPRKFQMNYPERSE
Homology
[Close]
BLAST of Csor.00g260480 vs. NCBI nr
Match: KAG6588641.1 (hypothetical protein SDJN03_17206, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400 bits (1029), Expect = 1.56e-140
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 

Query: 1   MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120
           PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS
Sbjct: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKTSKDIDVAEAERESPRYT 180
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKTSKDIDVAEAERESPRYT
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKTSKDIDVAEAERESPRYT 180

Query: 181 EELIEQAPRTLEEQPRKFQMNYPERSE 207
           EELIEQAPRTLEEQPRKFQMNYPERSE
Sbjct: 181 EELIEQAPRTLEEQPRKFQMNYPERSE 207

[Close]
BLAST of Csor.00g260480 vs. NCBI nr
Match: KAG7022436.1 (hypothetical protein SDJN02_16167 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 316 bits (809), Expect = 1.43e-106
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPRV+SPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRVQSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120
           PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS
Sbjct: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162

[Close]
BLAST of Csor.00g260480 vs. NCBI nr
Match: XP_022927689.1 (uncharacterized protein LOC111434507 [Cucurbita moschata])

HSP 1 Score: 315 bits (807), Expect = 2.88e-106
Identity = 160/162 (98.77%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPR+RSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120
           PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS
Sbjct: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           LSEMSYCAHEKKLLIVPFP+IIGFSVAEVMRQTALSLSPILK
Sbjct: 121 LSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILK 162

[Close]
BLAST of Csor.00g260480 vs. NCBI nr
Match: XP_022988926.1 (uncharacterized protein LOC111486136 [Cucurbita maxima] >XP_022988927.1 uncharacterized protein LOC111486136 [Cucurbita maxima])

HSP 1 Score: 312 bits (800), Expect = 3.34e-105
Identity = 158/162 (97.53%), Postives = 161/162 (99.38%), Query Frame = 0 

Query: 1   MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPR+RSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120
           PGRASWDSLK+RVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLS+PLL VTS
Sbjct: 61  PGRASWDSLKNRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162

[Close]
BLAST of Csor.00g260480 vs. NCBI nr
Match: XP_023530129.1 (uncharacterized protein LOC111792778 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311 bits (796), Expect = 1.36e-104
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0 

Query: 1   MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPR+RSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120
           PGRASWDSLK RVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLS+PLL VTS
Sbjct: 61  PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162

[Close]
BLAST of Csor.00g260480 vs. ExPASy TrEMBL
Match: A0A6J1EIP9 (uncharacterized protein LOC111434507 OS=Cucurbita moschata OX=3662 GN=LOC111434507 PE=4 SV=1)

HSP 1 Score: 315 bits (807), Expect = 1.39e-106
Identity = 160/162 (98.77%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPR+RSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120
           PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS
Sbjct: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           LSEMSYCAHEKKLLIVPFP+IIGFSVAEVMRQTALSLSPILK
Sbjct: 121 LSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILK 162

[Close]
BLAST of Csor.00g260480 vs. ExPASy TrEMBL
Match: A0A6J1JED8 (uncharacterized protein LOC111486136 OS=Cucurbita maxima OX=3661 GN=LOC111486136 PE=4 SV=1)

HSP 1 Score: 312 bits (800), Expect = 1.62e-105
Identity = 158/162 (97.53%), Postives = 161/162 (99.38%), Query Frame = 0 

Query: 1   MATHLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPR+RSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120
           PGRASWDSLK+RVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLS+PLL VTS
Sbjct: 61  PGRASWDSLKNRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162

[Close]
BLAST of Csor.00g260480 vs. ExPASy TrEMBL
Match: A0A6J1C7B2 (uncharacterized protein LOC111008035 OS=Momordica charantia OX=3673 GN=LOC111008035 PE=4 SV=1)

HSP 1 Score: 286 bits (733), Expect = 2.62e-95
Identity = 143/163 (87.73%), Postives = 154/163 (94.48%), Query Frame = 0 

Query: 1   MATHLQISAKMALHAPVLLAPRV-RSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSD 60
           MATHLQIS KMALH+PVL APR  RSPEC+HVVS KPHKR QNARSMVSCAMNM+AGQSD
Sbjct: 1   MATHLQISTKMALHSPVLPAPRHHRSPECNHVVSFKPHKRFQNARSMVSCAMNMTAGQSD 60

Query: 61  DPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVT 120
           DPG+ SWDSLKDRVKKLWD+SPEPVKCFPWNEAL+NFIQLIADL+L+VIKYL +PLLAVT
Sbjct: 61  DPGKVSWDSLKDRVKKLWDSSPEPVKCFPWNEALDNFIQLIADLVLAVIKYLCVPLLAVT 120

Query: 121 SLSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           SLSEMSYCAHEKKL +VPFPLI+GFSVAEVMRQTALSLSPILK
Sbjct: 121 SLSEMSYCAHEKKLFVVPFPLIVGFSVAEVMRQTALSLSPILK 163

[Close]
BLAST of Csor.00g260480 vs. ExPASy TrEMBL
Match: A0A1S3C0E1 (uncharacterized protein LOC103495211 OS=Cucumis melo OX=3656 GN=LOC103495211 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 1.65e-90
Identity = 137/160 (85.62%), Postives = 147/160 (91.88%), Query Frame = 0 

Query: 3   THLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62
           TH Q S KMALHAP LLAP  RSPECSH+VSLKPHKR QNARS+VSCAMNM+AGQSDD G
Sbjct: 10  THFQTSIKMALHAPFLLAPSCRSPECSHIVSLKPHKRFQNARSVVSCAMNMTAGQSDDSG 69

Query: 63  RASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTSLS 122
           R +WDSLK++VK+LWD SPEPVK FPWNEAL+NFIQLIADLIL+VIKYLS+PLL VTSLS
Sbjct: 70  RVNWDSLKNKVKQLWDTSPEPVKSFPWNEALDNFIQLIADLILTVIKYLSVPLLLVTSLS 129

Query: 123 EMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           EMSYCAHEKKLLIVPFP IIGFSVAEVMRQTALSLSPILK
Sbjct: 130 EMSYCAHEKKLLIVPFPFIIGFSVAEVMRQTALSLSPILK 169

[Close]
BLAST of Csor.00g260480 vs. ExPASy TrEMBL
Match: A0A0A0K6P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074900 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 6.93e-85
Identity = 132/160 (82.50%), Postives = 143/160 (89.38%), Query Frame = 0 

Query: 3   THLQISAKMALHAPVLLAPRVRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62
           TH Q S K+ALHAP LLAP  RSPECSHVVSLKPHKR QNA S+VSCA NM+AGQSDD G
Sbjct: 10  THFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNMTAGQSDDSG 69

Query: 63  RASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTSLS 122
           R +WDSLK+RVK+LW++SPEPVK FPWNEAL+NFIQLIADLIL+VIKYL +PLL VTSLS
Sbjct: 70  RVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLS 129

Query: 123 EMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 162
           EMSYCAHEKKLLIVPF  IIGFS AEVMRQTALSLSPILK
Sbjct: 130 EMSYCAHEKKLLIVPFLFIIGFSAAEVMRQTALSLSPILK 169

[Close]
BLAST of Csor.00g260480 vs. TAIR 10
Match: AT1G49510.1 (embryo defective 1273 )

HSP 1 Score: 141.7 bits (356), Expect = 6.4e-34
Identity = 68/123 (55.28%), Postives = 97/123 (78.86%), Query Frame = 0 

Query: 44  RSMVSCAMNMSAGQS-DDPGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIAD 103
           RS++  A++M +G S + P + ++D+L  R K +WDNSP+PVK FPWN A  NFIQL+ D
Sbjct: 50  RSLLCRAIHMESGHSGEQPKKLNFDNLLRRTKHVWDNSPQPVKEFPWNRAFGNFIQLVLD 109

Query: 104 LILSVIKYLSIPLLAVTSLSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 163
           L +SV+K+L +P+LAV+S+SEMSYCAHE+KL +VPFPL+IG  VA V+++TAL +SP LK
Sbjct: 110 LAISVVKFLFVPILAVSSISEMSYCAHERKLALVPFPLVIGMVVAGVLQETALKISPRLK 169

Query: 164 TSK 166
            ++
Sbjct: 170 EAE 172

The following BLAST results are available for this feature:
BLAST of Csor.00g260480 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g260480 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588641.11.56e-140100.00hypothetical protein SDJN03_17206, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7022436.11.43e-10699.38hypothetical protein SDJN02_16167 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022927689.12.88e-10698.77uncharacterized protein LOC111434507 [Cucurbita moschata][more]
XP_022988926.13.34e-10597.53uncharacterized protein LOC111486136 [Cucurbita maxima] >XP_022988927.1 uncharac... [more]
XP_023530129.11.36e-10497.53uncharacterized protein LOC111792778 [Cucurbita pepo subsp. pepo][more]
BLAST of Csor.00g260480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EIP91.39e-10698.77uncharacterized protein LOC111434507 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1JED81.62e-10597.53uncharacterized protein LOC111486136 OS=Cucurbita maxima OX=3661 GN=LOC111486136... [more]
A0A6J1C7B22.62e-9587.73uncharacterized protein LOC111008035 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A1S3C0E11.65e-9085.63uncharacterized protein LOC103495211 OS=Cucumis melo OX=3656 GN=LOC103495211 PE=... [more]
A0A0A0K6P06.93e-8582.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074900 PE=4 SV=1[more]
BLAST of Csor.00g260480 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G49510.16.4e-3455.28embryo defective 1273 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..207
NoneNo IPR availablePANTHERPTHR36000DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATEDcoord: 12..164
NoneNo IPR availablePANTHERPTHR36000:SF2DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATEDcoord: 12..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g260480.m01Csor.00g260480.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071472 cellular response to salt stress
biological_process GO:0009658 chloroplast organization
cellular_component GO:0016021 integral component of membrane