Csor.00g260070 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g260070
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor bHLH149-like
Location	Csor_Chr11: 9469011 .. 9469634 (+)
RNA-Seq Expression	Csor.00g260070
Synteny	Csor.00g260070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTGATTCTCTCTAAACTGGAAGAGCTGAGGAATTCCGATTCCATGGAGGAGCGACCGTGTAAACGCCGAAAAATCGAATCGGAGAATCGAATGGCGGATTTTCATGGCGCCGAATCCACGGATTTGAGAACACGGTGGAGAACAGAGTCGGAGCAGTATATTTACTCTTCAAAACTAGTTCAGGCTCTCCATCGAATCAGCCAGAAATCCGCATCACCGCTGGCGAGATCTTCAATTAGCAGCCGGAAAGTACGCGATACGGCGGATCGAGTTCTCGCCATTGCCGCTAAAGGCAAGACGCGGTGGAGCAGAGCGATCTTGTCAAATCGACTGGATCTCAAACTCAAGAAGCAAAAGAAGGTGAAACCGGCCGGAAACTGCAGGTGGACGAAGAAATTGGAAGTATCGAAGACGAGGAAATTGCCGGCGGTACAGCGAAAAGTTCGAACTCTCAGCCGCCTGGTTCCCGGCTGCCGGAAAATCTCATTCCCGAACCTCCTTGAAGAAGCTACAGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTTGCCGAGATTCTCGGCGGTGCTCCGGCCGATCGTCAAAGCTTCAGAACGAATTCGTAG

mRNA sequence

ATGGATGTGATTCTCTCTAAACTGGAAGAGCTGAGGAATTCCGATTCCATGGAGGAGCGACCGTGTAAACGCCGAAAAATCGAATCGGAGAATCGAATGGCGGATTTTCATGGCGCCGAATCCACGGATTTGAGAACACGGTGGAGAACAGAGTCGGAGCAGTATATTTACTCTTCAAAACTAGTTCAGGCTCTCCATCGAATCAGCCAGAAATCCGCATCACCGCTGGCGAGATCTTCAATTAGCAGCCGGAAAGTACGCGATACGGCGGATCGAGTTCTCGCCATTGCCGCTAAAGGCAAGACGCGGTGGAGCAGAGCGATCTTGTCAAATCGACTGGATCTCAAACTCAAGAAGCAAAAGAAGGTGAAACCGGCCGGAAACTGCAGGTGGACGAAGAAATTGGAAGTATCGAAGACGAGGAAATTGCCGGCGGTACAGCGAAAAGTTCGAACTCTCAGCCGCCTGGTTCCCGGCTGCCGGAAAATCTCATTCCCGAACCTCCTTGAAGAAGCTACAGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTTGCCGAGATTCTCGGCGGTGCTCCGGCCGATCGTCAAAGCTTCAGAACGAATTCGTAG

Coding sequence (CDS)

ATGGATGTGATTCTCTCTAAACTGGAAGAGCTGAGGAATTCCGATTCCATGGAGGAGCGACCGTGTAAACGCCGAAAAATCGAATCGGAGAATCGAATGGCGGATTTTCATGGCGCCGAATCCACGGATTTGAGAACACGGTGGAGAACAGAGTCGGAGCAGTATATTTACTCTTCAAAACTAGTTCAGGCTCTCCATCGAATCAGCCAGAAATCCGCATCACCGCTGGCGAGATCTTCAATTAGCAGCCGGAAAGTACGCGATACGGCGGATCGAGTTCTCGCCATTGCCGCTAAAGGCAAGACGCGGTGGAGCAGAGCGATCTTGTCAAATCGACTGGATCTCAAACTCAAGAAGCAAAAGAAGGTGAAACCGGCCGGAAACTGCAGGTGGACGAAGAAATTGGAAGTATCGAAGACGAGGAAATTGCCGGCGGTACAGCGAAAAGTTCGAACTCTCAGCCGCCTGGTTCCCGGCTGCCGGAAAATCTCATTCCCGAACCTCCTTGAAGAAGCTACAGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTTGCCGAGATTCTCGGCGGTGCTCCGGCCGATCGTCAAAGCTTCAGAACGAATTCGTAG

Protein sequence

MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSKLVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQKKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQMQVRAMTAVAEILGGAPADRQSFRTNS

Homology

[Close]

BLAST of Csor.00g260070 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36
Identity = 88/156 (56.41%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 47  RWRTESEQYIYSSKLVQALHRISQKSASPLARS-----SISSRKVRDTADRVLAIAAKGK 106
           RW+T   Q IY+ KLV+AL R+ Q+S++          S ++R++RDTADRVLA +A+G 
Sbjct: 43  RWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGT 102

Query: 107 TRWSRAILSNRLDLKLKKQKKVKPA-GNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGC 166
           TRWSRAIL++R+  KLKK +K K + GNC+  K L  +   KLPAV+RK++ L RLVPGC
Sbjct: 103 TRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNRIKLPAVERKLKILGRLVPGC 162

Query: 167 RKISFPNLLEEATDYIAALQMQVRAMTAVAEILGGA 197
           RK+S PNLL+EATDYIAAL+MQVRAM A+AE+L  A
Sbjct: 163 RKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAA 198

[Close]

BLAST of Csor.00g260070 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 92/210 (43.81%), Postives = 128/210 (60.95%), Query Frame = 0


Query: 4   ILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSKLVQ 63
           + ++L +   + S  +R  ++RK +S     +   + S  L  +WR+E +Q IYS+KLV 
Sbjct: 7   VSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLE-KWRSEKQQQIYSTKLVH 66

Query: 64  ALH--RISQKSASPLARSSI--SSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKK 123
           AL   RISQ+ +S  + SSI    R VR+ ADR LA+AA+GKT WSRAILS  + LK +K
Sbjct: 67  ALRELRISQQPSSS-SSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRK 126

Query: 124 QKKVK---------PAGNCRWTKKLEV---SKTRKLPAVQRKVRTLSRLVPGCRKISFPN 183
            K+ +           G+ R  K+       K + LPAVQRKV+ LSRLVPGCRK S P 
Sbjct: 127 HKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPV 186

Query: 184 LLEEATDYIAALQMQVRAMTAVAEILGGAP 198
           +LEE TDYIAA++MQ+R MTA+   +  +P
Sbjct: 187 VLEETTDYIAAMEMQIRTMTAILSAVSSSP 214

[Close]

BLAST of Csor.00g260070 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-28
Identity = 86/218 (39.45%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           M  ++S +E   ++ S   R  KR    S         + S ++  RWR+E +Q IYS+K
Sbjct: 1   MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAK 60

Query: 61  LVQALHRISQKSASPLARSSISSRK---VRDTADRVLAIAAKGKTRWSRAILSNRLDLKL 120
           L QAL ++   S++  + S  + ++   VR+ ADR LA++A+G+T WSRAIL+NR+ LK 
Sbjct: 61  LFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKF 120

Query: 121 KKQKK-------------VKPAGNCRWTKKLEVSKTRK--LPAVQRKVRTLSRLVPGCRK 180
           +KQ++             V  + N    +++ V +  K  +P V RKVR L RLVPGC K
Sbjct: 121 RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGK 180

Query: 181 ISFPNLLEEATDYIAALQMQVRAMTAVAEIL---GGAP 198
            S P +LEEATDYI AL+MQVRAM ++ ++L   G AP
Sbjct: 181 QSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218

[Close]

BLAST of Csor.00g260070 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-24
Identity = 77/173 (44.51%), Postives = 102/173 (58.96%), Query Frame = 0


Query: 23  KRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSKLVQALHRISQKSASPLARSSIS 82
           +R ++ SE        A    L  RWR  + Q +YS KL  AL R S++SA+        
Sbjct: 45  RRSRVSSEE-------APVRHLSRRWRATTAQKVYSLKLYDALQR-SRRSAT-------- 104

Query: 83  SRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQKKVKPAGNCRWTKKLE--VSKT 142
              VRDTAD+VLA  A+G TRWSRAIL +R    L++++  KPA       +      + 
Sbjct: 105 ---VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRR 164

Query: 143 RKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQMQVRAMTAVAEIL 194
           RKL AV  +VR L  LVPGCR+ + P LL+E  DYIAAL+MQVRAMTA+++IL
Sbjct: 165 RKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKIL 198

[Close]

BLAST of Csor.00g260070 vs. NCBI nr
Match: KAG6588599.1 (Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386 bits (991), Expect = 9.67e-135
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK
Sbjct: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ
Sbjct: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180
           KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ
Sbjct: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180

Query: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207
           MQVRAMTAVAEILGGAPADRQSFRTNS
Sbjct: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207

[Close]

BLAST of Csor.00g260070 vs. NCBI nr
Match: XP_022931562.1 (transcription factor bHLH149-like [Cucurbita moschata] >KAG7022395.1 Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384 bits (986), Expect = 5.59e-134
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK
Sbjct: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LVQALHRISQKSASPLARSSIS RKVRDTADRVLA+AAKGKTRWSRAILSNRLDLKLKKQ
Sbjct: 61  LVQALHRISQKSASPLARSSISGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180
           KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ
Sbjct: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180

Query: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207
           MQVRAMTAVAEILGGAPADRQSFRTNS
Sbjct: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207

[Close]

BLAST of Csor.00g260070 vs. NCBI nr
Match: XP_023530134.1 (transcription factor bHLH149-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364 bits (935), Expect = 3.32e-126
Identity = 195/207 (94.20%), Postives = 201/207 (97.10%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MDVI+SKLEELRNSDSME+RPCKRRKIESE+RMAD HGAESTDLRTRWRTESE+YIYSSK
Sbjct: 1   MDVIVSKLEELRNSDSMEQRPCKRRKIESEDRMADIHGAESTDLRTRWRTESEKYIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LVQALHRISQKSASPLARSSI+ RKVRDTADRVLA+AAKGKTRWSRAILSNRLDLKLKKQ
Sbjct: 61  LVQALHRISQKSASPLARSSINGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180
           KKVKPAGN RWTKKLEVSKTRKLPAVQRKVRTL RLVPGCR ISFPNLLEEATDYIAALQ
Sbjct: 121 KKVKPAGNGRWTKKLEVSKTRKLPAVQRKVRTLGRLVPGCRNISFPNLLEEATDYIAALQ 180

Query: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207
           MQVRAMTAVAEIL GAPADRQSFRTNS
Sbjct: 181 MQVRAMTAVAEILAGAPADRQSFRTNS 207

[Close]

BLAST of Csor.00g260070 vs. NCBI nr
Match: XP_022989472.1 (transcription factor bHLH149-like [Cucurbita maxima])

HSP 1 Score: 353 bits (907), Expect = 6.15e-122
Identity = 189/207 (91.30%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MD I+SK+ E RNSDSME+RPCKRRKIESENRM D HGAESTDL TRWRTE EQYIYSSK
Sbjct: 1   MDAIVSKMGEPRNSDSMEKRPCKRRKIESENRMPDIHGAESTDLITRWRTELEQYIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LVQALHRISQKSA PLARSSI+ RKVRDTADRVLA+AAKGKTRWSRAILSNRLDLKLKKQ
Sbjct: 61  LVQALHRISQKSALPLARSSINGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180
           KKVKPAGNCRWTKKLEV KTRKLPAVQRKVRTL RLVPGCRKISFPNLLEEATDYIAALQ
Sbjct: 121 KKVKPAGNCRWTKKLEVPKTRKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAALQ 180

Query: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207
           MQVRAMTAVAEIL GAPADRQ+FRTNS
Sbjct: 181 MQVRAMTAVAEILAGAPADRQNFRTNS 207

[Close]

BLAST of Csor.00g260070 vs. NCBI nr
Match: XP_023516409.1 (transcription factor bHLH149-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281 bits (719), Expect = 2.81e-93
Identity = 155/209 (74.16%), Postives = 179/209 (85.65%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MD I S LEE R+SD  E+RP KRRKIESEN+ A+   A STDL+ RWRTESEQ IYSSK
Sbjct: 1   MDAIASNLEESRSSDFTEQRPSKRRKIESENQAAEICSARSTDLKRRWRTESEQQIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LV+ALHR+++++ASP A+SSI+ RKVR+TAD VLA+AAKGKTRWSRAIL+NRL+LKLK  
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAKGKTRWSRAILTNRLELKLKNH 120

Query: 121 KKVKPAGNCRWTKKLEVS-KTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAAL 180
           KK KPAGNC   KKL++  +TRKLP VQRKV+TL RLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKLKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAEILGGAPADRQ-SFRTNS 207
           QMQVRAMTAVAE+L G PAD+Q SFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Csor.00g260070 vs. ExPASy TrEMBL
Match: A0A6J1EU06 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111437734 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 2.71e-134
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK
Sbjct: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LVQALHRISQKSASPLARSSIS RKVRDTADRVLA+AAKGKTRWSRAILSNRLDLKLKKQ
Sbjct: 61  LVQALHRISQKSASPLARSSISGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180
           KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ
Sbjct: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180

Query: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207
           MQVRAMTAVAEILGGAPADRQSFRTNS
Sbjct: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207

[Close]

BLAST of Csor.00g260070 vs. ExPASy TrEMBL
Match: A0A6J1JFX6 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111486520 PE=4 SV=1)

HSP 1 Score: 353 bits (907), Expect = 2.98e-122
Identity = 189/207 (91.30%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MD I+SK+ E RNSDSME+RPCKRRKIESENRM D HGAESTDL TRWRTE EQYIYSSK
Sbjct: 1   MDAIVSKMGEPRNSDSMEKRPCKRRKIESENRMPDIHGAESTDLITRWRTELEQYIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LVQALHRISQKSA PLARSSI+ RKVRDTADRVLA+AAKGKTRWSRAILSNRLDLKLKKQ
Sbjct: 61  LVQALHRISQKSALPLARSSINGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQ 180
           KKVKPAGNCRWTKKLEV KTRKLPAVQRKVRTL RLVPGCRKISFPNLLEEATDYIAALQ
Sbjct: 121 KKVKPAGNCRWTKKLEVPKTRKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAALQ 180

Query: 181 MQVRAMTAVAEILGGAPADRQSFRTNS 207
           MQVRAMTAVAEIL GAPADRQ+FRTNS
Sbjct: 181 MQVRAMTAVAEILAGAPADRQNFRTNS 207

[Close]

BLAST of Csor.00g260070 vs. ExPASy TrEMBL
Match: A0A6J1HC54 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111461990 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 3.89e-93
Identity = 154/209 (73.68%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MD I S LEE R+SD  E+RP KRRKIESEN+ A+   A STDL+ RWRTE+EQ IYSSK
Sbjct: 1   MDAIASNLEESRSSDFTEQRPRKRRKIESENQAAEICSARSTDLKRRWRTETEQQIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LV+ALHR+++++ASP A+SSI+ RKVR+TAD VLA+AAKGKTRWSRAIL+NRL+LKLKK 
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAKGKTRWSRAILTNRLELKLKKH 120

Query: 121 KKVKPAGNCRWTKKLEVS-KTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAAL 180
           KK KPAGNC   KK+++  +TRKLP VQRKV+TL RLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKVKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAEILGGAPADRQ-SFRTNS 207
           QMQVRAMTAVAE+L G PAD+Q SFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Csor.00g260070 vs. ExPASy TrEMBL
Match: A0A6J1HY72 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111467921 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 7.46e-91
Identity = 152/209 (72.73%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           MD I S LEE R+ D  E+RP K RKIESEN+ A+   A STDL+ RWRTESEQ IYSSK
Sbjct: 1   MDAIASNLEESRSFDFTEQRPSKCRKIESENQAAEICSARSTDLKRRWRTESEQQIYSSK 60

Query: 61  LVQALHRISQKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKKQ 120
           LV+ALHR+++++ASP A+SSI+ RKVR+TAD VLA+AA+GKTRWSRAIL+NRL+LKLK  
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAEGKTRWSRAILTNRLELKLKNH 120

Query: 121 KKVKPAGNCRWTKKLEVS-KTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAAL 180
           KK KPAGNC   KKL++  +TRKLP VQRKV+TL RLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKLKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAEILGGAPADRQ-SFRTNS 207
           QMQVRAMTAVAE+L G PAD+Q SFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Csor.00g260070 vs. ExPASy TrEMBL
Match: A0A1S4DY77 (transcription factor bHLH149-like OS=Cucumis melo OX=3656 GN=LOC103492109 PE=4 SV=1)

HSP 1 Score: 243 bits (621), Expect = 1.16e-78
Identity = 148/211 (70.14%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEE-RPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSS 60
           MD I S L+ L +S   E+ RP KRRKI+S     D    ES D RTRW TESE  IYSS
Sbjct: 5   MDPISSNLQHLTSSHFTEDHRPTKRRKIQSPEISVD----ESADSRTRWTTESEHRIYSS 64

Query: 61  KLVQALHRIS-QKSASPLARSSISSRKVRDTADRVLAIAAKGKTRWSRAILSN-RLDLKL 120
           KLV ALHR++  KS S  +RSSI  RKVR+TADRVLA+AAKGKTRWSRAIL+N RL  KL
Sbjct: 65  KLVDALHRVTAHKSTSLPSRSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQRKL 124

Query: 121 KKQKKVKPAGNCRWTKKLEVS-KTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYI 180
           KKQKKVK  GNC   KKL++  +TRKLP VQRKVRTL RLVPGCRKISFPNLLEEA+DYI
Sbjct: 125 KKQKKVKTVGNCSRAKKLKIKYETRKLPTVQRKVRTLGRLVPGCRKISFPNLLEEASDYI 184

Query: 181 AALQMQVRAMTAVAEILGGAPADRQSFRTNS 207
           +ALQMQVRAMTAVAE+LGGAP D QS RTNS
Sbjct: 185 SALQMQVRAMTAVAELLGGAPVDLQSLRTNS 211

[Close]

BLAST of Csor.00g260070 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 7.4e-38
Identity = 88/156 (56.41%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 47  RWRTESEQYIYSSKLVQALHRISQKSASPLARS-----SISSRKVRDTADRVLAIAAKGK 106
           RW+T   Q IY+ KLV+AL R+ Q+S++          S ++R++RDTADRVLA +A+G 
Sbjct: 43  RWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGT 102

Query: 107 TRWSRAILSNRLDLKLKKQKKVKPA-GNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGC 166
           TRWSRAIL++R+  KLKK +K K + GNC+  K L  +   KLPAV+RK++ L RLVPGC
Sbjct: 103 TRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNRIKLPAVERKLKILGRLVPGC 162

Query: 167 RKISFPNLLEEATDYIAALQMQVRAMTAVAEILGGA 197
           RK+S PNLL+EATDYIAAL+MQVRAM A+AE+L  A
Sbjct: 163 RKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAA 198

[Close]

BLAST of Csor.00g260070 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 92/210 (43.81%), Postives = 128/210 (60.95%), Query Frame = 0


Query: 4   ILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSKLVQ 63
           + ++L +   + S  +R  ++RK +S     +   + S  L  +WR+E +Q IYS+KLV 
Sbjct: 7   VSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLE-KWRSEKQQQIYSTKLVH 66

Query: 64  ALH--RISQKSASPLARSSI--SSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKK 123
           AL   RISQ+ +S  + SSI    R VR+ ADR LA+AA+GKT WSRAILS  + LK +K
Sbjct: 67  ALRELRISQQPSSS-SSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRK 126

Query: 124 QKKVK---------PAGNCRWTKKLEV---SKTRKLPAVQRKVRTLSRLVPGCRKISFPN 183
            K+ +           G+ R  K+       K + LPAVQRKV+ LSRLVPGCRK S P 
Sbjct: 127 HKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPV 186

Query: 184 LLEEATDYIAALQMQVRAMTAVAEILGGAP 198
           +LEE TDYIAA++MQ+R MTA+   +  +P
Sbjct: 187 VLEETTDYIAAMEMQIRTMTAILSAVSSSP 214

[Close]

BLAST of Csor.00g260070 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 92/210 (43.81%), Postives = 128/210 (60.95%), Query Frame = 0


Query: 4   ILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSKLVQ 63
           + ++L +   + S  +R  ++RK +S     +   + S  L  +WR+E +Q IYS+KLV 
Sbjct: 7   VSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISLE-KWRSEKQQQIYSTKLVH 66

Query: 64  ALH--RISQKSASPLARSSI--SSRKVRDTADRVLAIAAKGKTRWSRAILSNRLDLKLKK 123
           AL   RISQ+ +S  + SSI    R VR+ ADR LA+AA+GKT WSRAILS  + LK +K
Sbjct: 67  ALRELRISQQPSSS-SSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRK 126

Query: 124 QKKVK---------PAGNCRWTKKLEV---SKTRKLPAVQRKVRTLSRLVPGCRKISFPN 183
            K+ +           G+ R  K+       K + LPAVQRKV+ LSRLVPGCRK S P 
Sbjct: 127 HKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPV 186

Query: 184 LLEEATDYIAALQMQVRAMTAVAEILGGAP 198
           +LEE TDYIAA++MQ+R MTA+   +  +P
Sbjct: 187 VLEETTDYIAAMEMQIRTMTAILSAVSSSP 214

[Close]

BLAST of Csor.00g260070 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-29
Identity = 86/218 (39.45%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           M  ++S +E   ++ S   R  KR    S         + S ++  RWR+E +Q IYS+K
Sbjct: 1   MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAK 60

Query: 61  LVQALHRISQKSASPLARSSISSRK---VRDTADRVLAIAAKGKTRWSRAILSNRLDLKL 120
           L QAL ++   S++  + S  + ++   VR+ ADR LA++A+G+T WSRAIL+NR+ LK 
Sbjct: 61  LFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKF 120

Query: 121 KKQKK-------------VKPAGNCRWTKKLEVSKTRK--LPAVQRKVRTLSRLVPGCRK 180
           +KQ++             V  + N    +++ V +  K  +P V RKVR L RLVPGC K
Sbjct: 121 RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGK 180

Query: 181 ISFPNLLEEATDYIAALQMQVRAMTAVAEIL---GGAP 198
            S P +LEEATDYI AL+MQVRAM ++ ++L   G AP
Sbjct: 181 QSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218

[Close]

BLAST of Csor.00g260070 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-29
Identity = 86/218 (39.45%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60
           M  ++S +E   ++ S   R  KR    S         + S ++  RWR+E +Q IYS+K
Sbjct: 1   MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAK 60

Query: 61  LVQALHRISQKSASPLARSSISSRK---VRDTADRVLAIAAKGKTRWSRAILSNRLDLKL 120
           L QAL ++   S++  + S  + ++   VR+ ADR LA++A+G+T WSRAIL+NR+ LK 
Sbjct: 61  LFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKF 120

Query: 121 KKQKK-------------VKPAGNCRWTKKLEVSKTRK--LPAVQRKVRTLSRLVPGCRK 180
           +KQ++             V  + N    +++ V +  K  +P V RKVR L RLVPGC K
Sbjct: 121 RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGK 180

Query: 181 ISFPNLLEEATDYIAALQMQVRAMTAVAEIL---GGAP 198
            S P +LEEATDYI AL+MQVRAM ++ ++L   G AP
Sbjct: 181 QSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218

The following BLAST results are available for this feature:

BLAST of Csor.00g260070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80482	1.0e-36	56.41	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9LSN7	1.6e-29	43.81	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9C8Z9	3.9e-28	39.45	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
Q9M9L6	3.5e-24	44.51	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of Csor.00g260070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588599.1	9.67e-135	100.00	Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma...	[more]
XP_022931562.1	5.59e-134	99.03	transcription factor bHLH149-like [Cucurbita moschata] >KAG7022395.1 Transcripti...	[more]
XP_023530134.1	3.32e-126	94.20	transcription factor bHLH149-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989472.1	6.15e-122	91.30	transcription factor bHLH149-like [Cucurbita maxima]	[more]
XP_023516409.1	2.81e-93	74.16	transcription factor bHLH149-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g260070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EU06	2.71e-134	99.03	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111437734 ...	[more]
A0A6J1JFX6	2.98e-122	91.30	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111486520 PE...	[more]
A0A6J1HC54	3.89e-93	73.68	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111461990 ...	[more]
A0A6J1HY72	7.46e-91	72.73	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111467921 PE...	[more]
A0A1S4DY77	1.16e-78	70.14	transcription factor bHLH149-like OS=Cucumis melo OX=3656 GN=LOC103492109 PE=4 S...	[more]

BLAST of Csor.00g260070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09250.1	7.4e-38	56.41	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G17100.1	1.1e-30	43.81	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	1.1e-30	43.81	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	2.8e-29	39.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	2.8e-29	39.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124:SF69	TRANSCRIPTION FACTOR BHLH149	coord: 16..202
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 16..202
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 135..188 e-value: 1.15457E-16 score: 69.1884
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 148..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g260070.m01	Csor.00g260070.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding