Csor.00g259960 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g259960
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionProtein of unknown function (DUF3511)
LocationCsor_Chr17: 1953836 .. 1954087 (+)
RNA-Seq ExpressionCsor.00g259960
SyntenyCsor.00g259960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA

mRNA sequence

ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA

Coding sequence (CDS)

ATGGCTGCCAACGGAAACAGAGGCAGAGGAAGAGAGCTAAAAAAACCTTGTAGATCAGATACGTACGTAAGCAGTGAGAACCACCAGCTACCGGCGGCTTCAACGGCGGCGTGCCACGATGAACCGGAGGCTAAAAGGCAACGGCGGGTTGCGAAGTACAAGGCCTACGCCGTCGAAAGCAAATTCAAAGCATCGCTTAGGAATGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTAACCGTTGA

Protein sequence

MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR
Homology
BLAST of Csor.00g259960 vs. NCBI nr
Match: KAG6575094.1 (hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013667.1 hypothetical protein SDJN02_23834, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166 bits (420), Expect = 1.13e-51
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVES 60
          MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVES
Sbjct: 1  MAANGNRGRGRELKKPCRSDTYVSSENHQLPAASTAACHDEPEAKRQRRVAKYKAYAVES 60

Query: 61 KFKASLRNGIRWVKIKCSELLNR 83
          KFKASLRNGIRWVKIKCSELLNR
Sbjct: 61 KFKASLRNGIRWVKIKCSELLNR 83

BLAST of Csor.00g259960 vs. NCBI nr
Match: KAG7026338.1 (hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105 bits (262), Expect = 2.31e-27
Identity = 59/100 (59.00%), Postives = 69/100 (69.00%), Query Frame = 0

Query: 1   MAANGNRGRGRELKKPCRSDTYVSSENHQ-LPAASTAACH----------------DEPE 60
           MAA G+  RG +LK PCRSDTY+ +EN Q  PAA TAA +                DE E
Sbjct: 1   MAARGHTERGGQLKSPCRSDTYIDTENQQQFPAAQTAAGNRHSHLHGGSTFSKGGSDESE 60

Query: 61  AKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR 83
            KRQ+R+AKYKAYAVESKFKAS+R+GIRWVKIKC +LL R
Sbjct: 61  VKRQKRIAKYKAYAVESKFKASIRSGIRWVKIKCGDLLRR 100

BLAST of Csor.00g259960 vs. NCBI nr
Match: KGN47400.1 (hypothetical protein Csa_023055 [Cucumis sativus])

HSP 1 Score: 103 bits (257), Expect = 1.00e-26
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYVSS------ENHQLPAASTAAC-HDEPEAKRQRRVAKY 60
          MAA GNR RG  LK PCRSDTY ++       +H    +S+ +  HDEPE KRQRR+AKY
Sbjct: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60

Query: 61 KAYAVESKFKASLRNGIRWVKIKCSELLNR 83
          KAYAVESK K+SLR+GIRWVKIKC+ELL R
Sbjct: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

BLAST of Csor.00g259960 vs. NCBI nr
Match: TYK02938.1 (hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 4.78e-23
Identity = 57/92 (61.96%), Postives = 63/92 (68.48%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYVSSENH--QLPAASTA-------ACHDEPEAKRQRRVA 60
          MA  GNR  G  LK  CRSD Y SS ++  +  AA TA         HDE E KRQRR+A
Sbjct: 1  MAGKGNREGGGVLKSTCRSDMYTSSSDNPQRFTAAPTAWNTSSVSNGHDEQEVKRQRRIA 60

Query: 61 KYKAYAVESKFKASLRNGIRWVKIKCSELLNR 83
          KYKAYAVESK K+SLRNGIRWVKIK SELL+R
Sbjct: 61 KYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

BLAST of Csor.00g259960 vs. NCBI nr
Match: XP_022138799.1 (uncharacterized protein LOC111009876 [Momordica charantia])

HSP 1 Score: 88.6 bits (218), Expect = 1.24e-20
Identity = 54/103 (52.43%), Postives = 63/103 (61.17%), Query Frame = 0

Query: 1   MAANGNRGRGRELKKP--CRSDTYV------SSENHQLPAA------------STAACHD 60
           MA  GNR RG E K    C SD Y       S  N + PAA            S +  +D
Sbjct: 1   MATGGNRERGSEFKSAYICSSDNYGNEMNGRSQVNQRFPAAWNNTHGHMHGGSSFSGGYD 60

Query: 61  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR 83
           EPEAKRQRR+AKYKAYAVESK K+S RNGIRWVKIKC+++ +R
Sbjct: 61  EPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

BLAST of Csor.00g259960 vs. ExPASy TrEMBL
Match: A0A0A0KCE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 4.84e-27
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYVSS------ENHQLPAASTAAC-HDEPEAKRQRRVAKY 60
          MAA GNR RG  LK PCRSDTY ++       +H    +S+ +  HDEPE KRQRR+AKY
Sbjct: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60

Query: 61 KAYAVESKFKASLRNGIRWVKIKCSELLNR 83
          KAYAVESK K+SLR+GIRWVKIKC+ELL R
Sbjct: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

BLAST of Csor.00g259960 vs. ExPASy TrEMBL
Match: A0A5D3BVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00180 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.31e-23
Identity = 57/92 (61.96%), Postives = 63/92 (68.48%), Query Frame = 0

Query: 1  MAANGNRGRGRELKKPCRSDTYVSSENH--QLPAASTA-------ACHDEPEAKRQRRVA 60
          MA  GNR  G  LK  CRSD Y SS ++  +  AA TA         HDE E KRQRR+A
Sbjct: 1  MAGKGNREGGGVLKSTCRSDMYTSSSDNPQRFTAAPTAWNTSSVSNGHDEQEVKRQRRIA 60

Query: 61 KYKAYAVESKFKASLRNGIRWVKIKCSELLNR 83
          KYKAYAVESK K+SLRNGIRWVKIK SELL+R
Sbjct: 61 KYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

BLAST of Csor.00g259960 vs. ExPASy TrEMBL
Match: A0A6J1CB45 (uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009876 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.00e-21
Identity = 54/103 (52.43%), Postives = 63/103 (61.17%), Query Frame = 0

Query: 1   MAANGNRGRGRELKKP--CRSDTYV------SSENHQLPAA------------STAACHD 60
           MA  GNR RG E K    C SD Y       S  N + PAA            S +  +D
Sbjct: 1   MATGGNRERGSEFKSAYICSSDNYGNEMNGRSQVNQRFPAAWNNTHGHMHGGSSFSGGYD 60

Query: 61  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR 83
           EPEAKRQRR+AKYKAYAVESK K+S RNGIRWVKIKC+++ +R
Sbjct: 61  EPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

BLAST of Csor.00g259960 vs. ExPASy TrEMBL
Match: M0RPK9 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103970456 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.21e-13
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 32  AASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLN 82
           A S+A C  +PEAKR+RRVA YKAYAVE K KAS R G RW+K+KCSEL++
Sbjct: 94  AGSSAWCFTDPEAKRRRRVASYKAYAVEGKVKASFRKGFRWIKVKCSELVH 144

BLAST of Csor.00g259960 vs. ExPASy TrEMBL
Match: A0A4S8J1R9 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb11t04910 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.64e-13
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 32  AASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLN 82
           A S+A C  +PEAKR+RRVA YKAYAVE K KAS R G RW+K+KCSEL++
Sbjct: 95  AGSSAWCFSDPEAKRRRRVAGYKAYAVEGKVKASFRKGFRWIKVKCSELVH 145

BLAST of Csor.00g259960 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08
Identity = 22/43 (51.16%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 41  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLNR 84
           + E KR++R+A+YKAY VE K K++L+NG RW+K KC ++++R
Sbjct: 67  DAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHR 109

BLAST of Csor.00g259960 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 53.9 bits (128), Expect = 7.1e-08
Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 40  DEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLN 83
           ++PE KR+RRVAKYK Y+ E K K +LR   +W+KI+CS++++
Sbjct: 80  NDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIH 122

BLAST of Csor.00g259960 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0

Query: 41  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELLN 83
           +P+ +R++RV  Y+AY VE K K S R   +W+K KC++LLN
Sbjct: 75  DPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

BLAST of Csor.00g259960 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 44.3 bits (103), Expect = 5.6e-05
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0

Query: 32 AASTAACHDEPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVK 75
          AAS +    +PE++R+RRVA YK Y+VE K K S+R   +W K
Sbjct: 54 AASRSWSFSDPESRRKRRVAGYKVYSVEQKMKGSIRKSFKWFK 96

BLAST of Csor.00g259960 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 44.3 bits (103), Expect = 5.6e-05
Identity = 19/41 (46.34%), Postives = 29/41 (70.73%), Query Frame = 0

Query: 41  EPEAKRQRRVAKYKAYAVESKFKASLRNGIRWVKIKCSELL 82
           +PE +R++RVA YK Y VE K K S RN  RW+K + ++++
Sbjct: 61  DPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVV 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575094.11.13e-51100.00hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026338.12.31e-2759.00hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyro... [more]
KGN47400.11.00e-2663.33hypothetical protein Csa_023055 [Cucumis sativus][more]
TYK02938.14.78e-2361.96hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa][more]
XP_022138799.11.24e-2052.43uncharacterized protein LOC111009876 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A0A0KCE94.84e-2763.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1[more]
A0A5D3BVC02.31e-2361.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CB456.00e-2152.43uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
M0RPK93.21e-1366.67Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103970... [more]
A0A4S8J1R94.64e-1366.67Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb11t04910 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT2G47480.14.2e-0851.16Protein of unknown function (DUF3511) [more]
AT3G05725.17.1e-0851.16Protein of unknown function (DUF3511) [more]
AT2G19460.11.3e-0647.62Protein of unknown function (DUF3511) [more]
AT3G13910.15.6e-0548.84Protein of unknown function (DUF3511) [more]
AT5G11970.15.6e-0546.34Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 40..82
e-value: 2.2E-21
score: 75.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 15..81
NoneNo IPR availablePANTHERPTHR33193:SF13DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 15..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g259960.m01Csor.00g259960.m01mRNA