Csor.00g259430 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g259430
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr17: 1610544 .. 1610939 (-)
RNA-Seq ExpressionCsor.00g259430
SyntenyCsor.00g259430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAATGCTTCTTCTTTATTCCTTTGGGAAGACACAGCAGATTCTGAGGTGGATAGATTATTGTCTCATCCTCATCAACTCGAATCTGCTGTGGACGATCCGGAGGACGCTCGATCCTGCAGCTGCGATGATTATGCTACTGATCGGAGCGCTGTTGATCTCCAAGATGATGGGGATGGTGATGAAGATCGAGCCGTTGGTTCGACCGGTGACGACGCTCGATCAAGCCATCTCGATGAAACACGACCAAGCGGGGCAACGTTGGAGTATAGTTCTGAGGAGGACGAGGAAGAAGAAGAAGAGTCGAATAATAATGTGGGTGCGATCCGAGATATGAACGAAATGGAAGATAAGCTCTTTTGGGATACGTGCATGGAGGGAGGGTATCCGTGA

mRNA sequence

ATGAACAATGCTTCTTCTTTATTCCTTTGGGAAGACACAGCAGATTCTGAGGTGGATAGATTATTGTCTCATCCTCATCAACTCGAATCTGCTGTGGACGATCCGGAGGACGCTCGATCCTGCAGCTGCGATGATTATGCTACTGATCGGAGCGCTGTTGATCTCCAAGATGATGGGGATGGTGATGAAGATCGAGCCGTTGGTTCGACCGGTGACGACGCTCGATCAAGCCATCTCGATGAAACACGACCAAGCGGGGCAACGTTGGAGTATAGTTCTGAGGAGGACGAGGAAGAAGAAGAAGAGTCGAATAATAATGTGGGTGCGATCCGAGATATGAACGAAATGGAAGATAAGCTCTTTTGGGATACGTGCATGGAGGGAGGGTATCCGTGA

Coding sequence (CDS)

ATGAACAATGCTTCTTCTTTATTCCTTTGGGAAGACACAGCAGATTCTGAGGTGGATAGATTATTGTCTCATCCTCATCAACTCGAATCTGCTGTGGACGATCCGGAGGACGCTCGATCCTGCAGCTGCGATGATTATGCTACTGATCGGAGCGCTGTTGATCTCCAAGATGATGGGGATGGTGATGAAGATCGAGCCGTTGGTTCGACCGGTGACGACGCTCGATCAAGCCATCTCGATGAAACACGACCAAGCGGGGCAACGTTGGAGTATAGTTCTGAGGAGGACGAGGAAGAAGAAGAAGAGTCGAATAATAATGTGGGTGCGATCCGAGATATGAACGAAATGGAAGATAAGCTCTTTTGGGATACGTGCATGGAGGGAGGGTATCCGTGA

Protein sequence

MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP
Homology
BLAST of Csor.00g259430 vs. NCBI nr
Match: KAG6575041.1 (hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257 bits (657), Expect = 2.64e-86
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0

Query: 1   MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGD 60
           MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGD
Sbjct: 1   MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGD 60

Query: 61  GDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMNEMEDKL 120
           GDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMNEMEDKL
Sbjct: 61  GDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMNEMEDKL 120

Query: 121 FWDTCMEGGYP 131
           FWDTCMEGGYP
Sbjct: 121 FWDTCMEGGYP 131

BLAST of Csor.00g259430 vs. NCBI nr
Match: KAA0033453.1 (hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 137 bits (344), Expect = 1.47e-38
Identity = 85/140 (60.71%), Postives = 102/140 (72.86%), Query Frame = 0

Query: 1   MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDP--EDARSCSCD--DYATDR-SAVDL 60
           + +ASS FLWED+ADSEVD+LLSHPH+LESAVDD   EDA SCSC+  D++ D   A+D 
Sbjct: 4   IKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRALDF 63

Query: 61  QDDGDG---DEDRAVGSTGDDARSSHLDETRPSGATLEYS-SEEDEEEEEESNNNVGAIR 120
           QDDGD    D D+ +   GD  R       R SGA L+Y   EE+EEEEEES+++VG IR
Sbjct: 64  QDDGDNGDRDLDQDICLIGDGGR-------RRSGAALKYGYEEEEEEEEEESSDDVGVIR 123

Query: 121 DMNEMEDKLFWDTCMEGGYP 131
           +MNEMEDKLFWDTCM GGYP
Sbjct: 124 NMNEMEDKLFWDTCMAGGYP 136

BLAST of Csor.00g259430 vs. NCBI nr
Match: KAE8646684.1 (hypothetical protein Csa_005604 [Cucumis sativus])

HSP 1 Score: 115 bits (289), Expect = 4.23e-30
Identity = 79/126 (62.70%), Postives = 89/126 (70.63%), Query Frame = 0

Query: 13  TADSEVDRLLSHP-HQLESAVDDP---EDARSCSCDDYATDRSAVDLQD--DGD-GDEDR 72
           +ADSEVD+LLSHP HQLESAVDD    EDA SCSC++   D S  D QD  DGD GD D+
Sbjct: 31  SADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNN--NDFSIDDFQDAYDGDNGDGDQ 90

Query: 73  AVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMNEMEDKLFWDTC 131
            +G  GD  R       R SGA   Y  EE+EEEEE SNN+VGAIR+MNEMEDK+FWDTC
Sbjct: 91  DIGLIGDGGR-------RRSGAG--YEEEEEEEEEESSNNDVGAIRNMNEMEDKVFWDTC 145

BLAST of Csor.00g259430 vs. NCBI nr
Match: KAE8076890.1 (hypothetical protein FH972_015512 [Carpinus fangiana])

HSP 1 Score: 63.2 bits (152), Expect = 1.53e-09
Identity = 56/148 (37.84%), Postives = 69/148 (46.62%), Query Frame = 0

Query: 3   NASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGD 62
           + SS  L+ED ADSE D      H++ +  DD +DA SCSCDD   D       +  D D
Sbjct: 2   DVSSCLLFEDIADSETDA-AGPDHKIHA--DDDQDAESCSCDDACDDHHTPGFDEALDCD 61

Query: 63  EDRAVGSTGDDARSSHLDETRPSGATL---------EYSSEEDEEEEEESNNNVGAIR-- 122
           E  +  S G DA   H    RP  +             SSEE E EEE    N+G I   
Sbjct: 62  EKDSGASNGGDAGDDHHQCGRPCASCCLSSDHAALGSLSSEEGEGEEE---TNMGEINKD 121

Query: 123 --------DMNEMEDKLFWDTCMEGGYP 131
                   + +EMED LFW+TCM  GYP
Sbjct: 122 DPSKKKEINKDEMEDGLFWETCMAVGYP 143

BLAST of Csor.00g259430 vs. NCBI nr
Match: KAG2727271.1 (hypothetical protein I3760_01G150500 [Carya illinoinensis])

HSP 1 Score: 60.5 bits (145), Expect = 1.79e-08
Identity = 53/135 (39.26%), Postives = 69/135 (51.11%), Query Frame = 0

Query: 9   LWEDTADSE----VDRLLSHPHQLESAVDDPE--DARSCSCD---DY---ATDRSAVDLQ 68
           L EDTADS     V  L +H  ++  A DD +  DA SCSCD   DY      +  VD  
Sbjct: 15  LLEDTADSHDTEAVPDLKTHAAEVAIAGDDDDLQDAESCSCDCTSDYNKRGFSKVDVDDC 74

Query: 69  DDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMNEM 128
           DD D D     G+ GDD R    D      +T + + E +  + EE    +G   +M+EM
Sbjct: 75  DDQDSDGGSNFGNDGDDHREKSADSCCEIRSTSDVALECNFSKGEEKK--IGEFNNMDEM 134

Query: 129 EDKLFWDTCMEGGYP 131
           ED+LFW+TCM  GYP
Sbjct: 135 EDRLFWETCMAEGYP 147

BLAST of Csor.00g259430 vs. ExPASy TrEMBL
Match: A0A5A7SSL9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001140 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 7.14e-39
Identity = 85/140 (60.71%), Postives = 102/140 (72.86%), Query Frame = 0

Query: 1   MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDP--EDARSCSCD--DYATDR-SAVDL 60
           + +ASS FLWED+ADSEVD+LLSHPH+LESAVDD   EDA SCSC+  D++ D   A+D 
Sbjct: 4   IKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRALDF 63

Query: 61  QDDGDG---DEDRAVGSTGDDARSSHLDETRPSGATLEYS-SEEDEEEEEESNNNVGAIR 120
           QDDGD    D D+ +   GD  R       R SGA L+Y   EE+EEEEEES+++VG IR
Sbjct: 64  QDDGDNGDRDLDQDICLIGDGGR-------RRSGAALKYGYEEEEEEEEEESSDDVGVIR 123

Query: 121 DMNEMEDKLFWDTCMEGGYP 131
           +MNEMEDKLFWDTCM GGYP
Sbjct: 124 NMNEMEDKLFWDTCMAGGYP 136

BLAST of Csor.00g259430 vs. ExPASy TrEMBL
Match: A0A0A0KBF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 1.39e-37
Identity = 87/138 (63.04%), Postives = 99/138 (71.74%), Query Frame = 0

Query: 1   MNNASSLFLWEDTADSEVDRLLSHP-HQLESAVDDP---EDARSCSCDDYATDRSAVDLQ 60
           + +ASS FLWED+ADSEVD+LLSHP HQLESAVDD    EDA SCSC++   D S  D Q
Sbjct: 4   IKDASSFFLWEDSADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNN--NDFSIDDFQ 63

Query: 61  D--DGD-GDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDM 120
           D  DGD GD D+ +G  GD  R       R SGA   Y  EE+EEEEE SNN+VGAIR+M
Sbjct: 64  DAYDGDNGDGDQDIGLIGDGGR-------RRSGAG--YEEEEEEEEEESSNNDVGAIRNM 123

Query: 121 NEMEDKLFWDTCMEGGYP 131
           NEMEDK+FWDTCM GGYP
Sbjct: 124 NEMEDKVFWDTCMAGGYP 130

BLAST of Csor.00g259430 vs. ExPASy TrEMBL
Match: A0A5N6RGD2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015512 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.40e-10
Identity = 56/148 (37.84%), Postives = 69/148 (46.62%), Query Frame = 0

Query: 3   NASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGD 62
           + SS  L+ED ADSE D      H++ +  DD +DA SCSCDD   D       +  D D
Sbjct: 2   DVSSCLLFEDIADSETDA-AGPDHKIHA--DDDQDAESCSCDDACDDHHTPGFDEALDCD 61

Query: 63  EDRAVGSTGDDARSSHLDETRPSGATL---------EYSSEEDEEEEEESNNNVGAIR-- 122
           E  +  S G DA   H    RP  +             SSEE E EEE    N+G I   
Sbjct: 62  EKDSGASNGGDAGDDHHQCGRPCASCCLSSDHAALGSLSSEEGEGEEE---TNMGEINKD 121

Query: 123 --------DMNEMEDKLFWDTCMEGGYP 131
                   + +EMED LFW+TCM  GYP
Sbjct: 122 DPSKKKEINKDEMEDGLFWETCMAVGYP 143

BLAST of Csor.00g259430 vs. ExPASy TrEMBL
Match: A0A2N9EJU4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2920 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.47e-09
Identity = 49/133 (36.84%), Postives = 69/133 (51.88%), Query Frame = 0

Query: 3   NASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGD 62
           + SS  L+EDTADSE D  + H   + + + D +DA SCSCD    D+         D D
Sbjct: 11  DVSSSLLFEDTADSETDAEI-HADDVATDIFDDQDAESCSCDTCDDDKLGFTDHQVLDCD 70

Query: 63  EDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDE----EEEEESNNNVGAIRDMNEMED 122
           +  +  S+G +       E   SG    + S+E+      +E E    V  I D++EMED
Sbjct: 71  DQDSGNSSGINHGDDDHHEPSTSGCNQLWLSDENSGCLSRKEGEEETKVDKI-DVDEMED 130

Query: 123 KLFWDTCMEGGYP 131
           +LFW+TCME GYP
Sbjct: 131 RLFWETCMEVGYP 141

BLAST of Csor.00g259430 vs. ExPASy TrEMBL
Match: A0A2H5N748 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.12e-08
Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 0

Query: 3   NASSLFLWEDTADSEVDRLLSHPHQLES--AVDDPEDARSCSCDDYATDRSAVDLQDDG- 62
           + SS  L E++ADSEVD L       ++  A  D +DA SCSCD        +++Q +G 
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCD-------TIEMQAEGL 67

Query: 63  DGDEDRAVGSTGDDARSSHLDETRP----SGATLEYSSEEDEEEEEES-----NNNVGA- 122
           D D D     + DD   S  D+ R         + ++   D+EEE  S     NNN+   
Sbjct: 68  DYDHDHKNEESNDDGDGSSTDQHRQINWGGSCKIWWADAADDEEEYSSWDIGINNNISRK 127

Query: 123 IRDMNEMEDKLFWDTCMEGGYP 131
           ++D  EMED+LFW+TCM  GYP
Sbjct: 128 VKD--EMEDRLFWETCMAFGYP 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575041.12.64e-86100.00hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0033453.11.47e-3860.71hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa][more]
KAE8646684.14.23e-3062.70hypothetical protein Csa_005604 [Cucumis sativus][more]
KAE8076890.11.53e-0937.84hypothetical protein FH972_015512 [Carpinus fangiana][more]
KAG2727271.11.79e-0839.26hypothetical protein I3760_01G150500 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
A0A5A7SSL97.14e-3960.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KBF31.39e-3763.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1[more]
A0A5N6RGD27.40e-1037.84Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015512 PE=4 SV=1[more]
A0A2N9EJU45.47e-0936.84Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2920 PE=4 SV=1[more]
A0A2H5N7484.12e-0836.62Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..115
NoneNo IPR availablePANTHERPTHR35726:SF5SUBFAMILY NOT NAMEDcoord: 4..131
NoneNo IPR availablePANTHERPTHR35726GLUTAMIC ACID-RICH PROTEIN-LIKEcoord: 4..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g259430.m01Csor.00g259430.m01mRNA