Csor.00g259130 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGCGTATTTAGCAGTTCGATTATATCGCCGCCGGACGAACTGGTGGCTGCCGGCTGCCGGACTCCGTCGCCGAAGATATCGTCCACGGCGCTGGCCAAGCGGTTCGCGGATTCCAATACTGCCGCCGTCTCCCTCCAGATCGGTGACCATGTCCACCTCGCCTTCACTCACCACAACGAGTCTCCCTTGCGCCCCAGGTACCGGCGATTCTCCGTTCAAAACGCCGTTCTACGGCGGCGCTCTGTTTTTTTTCCTGAAAATCTAAACTATATATATATATATACTAAGAATTATAAAATTGAAAATGATCACTTAAATATTTTTAAATGTATTAAACTCAATAATAATCTTTATAAATTATGTCAAACAATTTACTAAATACAAAATTAATTCAAATATTAAGTGACTAATTCATATAAAAGTGACCGCAAGGGTGTTTTTGTCATTTCACAGATTTATTATAAAACCGCCAAACAATAATTCCAGCATCCAATGTTCCCGTAGTTTCTGGAAAGTGAAGCCATATTTATTTTATATTTTAAACTTAATAAAAACCATATTTATTATGCATTAAATTAAAAAAAAAGTTTAATTAATTAGTTTGATAAATATTTATTTTTAATATAATAAGAATTTTCAAATATTTTTTTTAAATTAGGTTTATAATGTTTTTAACACTCATTGAATGTATATATATATAGATATATATTTATTTATTTATCGATATTTAATAACTTATTAATAAATTTATTAGATATAAATTTAAAATTTTAATTTAATGAAAGATTTCAAATAAATTAAGTTAAGAATTAATATAAATAATTTTAAAATTTAAATTTATTATACTATTTTTAAAAAGAACATACATTAAATATATACAAGAAAAAAAAAAGAATTAATTAAAAATCGTGTATTTTTCGTATTTTGAAAATGAAAATCCAAAAAAACGCCATTGTAGATCACTGGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCTCTAGACAATTTGGGGAGCTTGAGGAACCAATACGGCCTTCCCAAATCCACCAATGAAGTTCTCTTAGTTATCGAAGCTTACAAAGCTCTTCGTGATCGAGCTCCATATCCGGTCGACCATGTCGTCGGCCATTTCAGCGGCAGCTTCGCATTCATCCTCTTCGACAACTCCACCTCCACCCTCTTCGTCGCCTCTGTAAGTCACCGTCTCAGAATCTAATCTCCGAAATCGAAGTTAGAAAGTACTGATTTCTTATTGATTTTGGTTTTTGCAGGATCAGTTCGGGAAGGTGCCTTTGTATTGGGGAATCACCGCTGATGGATATGTCGCGTTCGCCGATGATGCTGGTTTACTCAAAGGCGCTTGTGGAAAATCCCTTGCGTCGTTTCCACAAGGTATTTCGAAACTTTGCGCGATTTTCATGGATTAGAAAAATTAGGGCACGGATTCATCTGAATCGTTGTTTCAATTGCAGGCTGTTTTTACTCCACATCGGTTGGAGAATTGAGATGCTACGAGAATCCGAAGAACAAGATAACTGCTGAACCTGCTCCTGAAGAAGAGATCTGGGGTGCAAAATTCAAGGTATGCGATCATTATACTCTATTTCATATCTAGAATTAAGAAAATGGATGCCAAAATTAGGCTTGGAAATTTACTGATAGCGTCATTGTGTGAGTCAGTTTGAGTATGAGTGTCAAAATTCTTCCTCTGAATGATGAACACAGCTGAAGATTCAAAGATTATGATTTAACATTGCACTTGATTACACCACAAAAAGGTAGAGAAAAATCATGCCCATAGCCATGATCTTATCTCAATGGAACTGGAAAGTACTTTAGCCATAATAAAGAATTCACTATCTTTTGGACTGTGGATATCATAAAGTAGTGGATAAAGAACTAAATTCTATGCCATACATAACATGATGAGACATTCACTGTGTAGGTCCTCACCCATTGAATAATTCTTCTATCTTTCATACTCTGATTCTGTTTTGATCCAAAATAATGTTCTTTGAACCTTACATGTTGAGTGATCCATCAAAATAATCGGATTTGGCATATGAAATTACATCCAAAGGAGTGAAAATGGACATTAAAAAAGTTAATTCGTGCTTTTTTGAGAAACCCCACCAAGCTCATAATGTAGAACCTAATTTTAGATTTGCAAGTCAAGATTAATGAGAAAGATAATCACTGCAAGTTGGCTCTAAGGAAAGTTGGTTCAAATCATGGCGGTCAACTAGGATTCAATATTCTAAGGATTAGGTAGAAAAAGTTGTTGGGACGTGGAGCCTGATGTTTGCTTATGGGTTAAGTAGTTTAAGTCTAAGATGGAATCTTATCTTATATTATTTATTCTCCTATCTGATGTAGTTTTCAAGATGGAGTGTTGGTTTCTTATTTAGTTTTCAAGATAGATTAAGTGTAACTAGTGGAAGTCGTCTATAAATAAACCTTAGCTACCGTGAAGTTTTATATTTCGGTGTCTCCATATTCCTCCTTGCGTCTTCTCTCTTTTGTTGCCACCGTGAAGTTTTGCATTTCGGTGTCTCCATATTTCTCTTTGCGTCTTCTCTTTCTTCACATTTCGGTGTCTCTATATTCCTCCTTGCGTCTTCTCTCTTTTGTTGCCACCGTGAAGTTTTGCATTTCGGTGTCTCCATATTTCTCTTTGTGTCTTCTCTTTTTGTCGCTACCGTGAAGTTTTGCATTTAAGTGTCTCCATATTTCTCCTTGCGTCCCGTCTTTTGTTGCCACCATGAAGTTTTAAATTTCGATGTCTCCATATTCCTTCTTGTGTCTTCTCTCTTTTGCTGCCACCGCCGTGACGTTTTACATTCCGGGGTTTTCATATTCCTCTTTGTGTCTTCTCTCTTTTGTTCTCATGTTACTCATCTAGATCGAGAGTGTGAGTTTTGCAATCTTAACATAACTTACAACTAAAGAGACGAAAATAGAACATTATAGAAAAAAGTTGATTCGATCTCTTTTGAGAAACCCCACCAAGCTCATAAAACCAACCTTATCGTTCGTGGTTATGATGGATGCTTGACTTTTCAGGTGGAGGGACCAGCGGCTGTATCAGCCACAGGGTTGGGGTATCACAATTTCCCAATGGAGATTTCATAG ATGTTGGGCGTATTTAGCAGTTCGATTATATCGCCGCCGGACGAACTGGTGGCTGCCGGCTGCCGGACTCCGTCGCCGAAGATATCGTCCACGGCGCTGGCCAAGCGGTTCGCGGATTCCAATACTGCCGCCGTCTCCCTCCAGATCGGTGACCATGTCCACCTCGCCTTCACTCACCACAACGAGTCTCCCTTGCGCCCCAGATCACTGGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCTCTAGACAATTTGGGGAGCTTGAGGAACCAATACGGCCTTCCCAAATCCACCAATGAAGTTCTCTTAGTTATCGAAGCTTACAAAGCTCTTCGTGATCGAGCTCCATATCCGGTCGACCATGTCGTCGGCCATTTCAGCGGCAGCTTCGCATTCATCCTCTTCGACAACTCCACCTCCACCCTCTTCGTCGCCTCTGATCAGTTCGGGAAGGTGCCTTTGTATTGGGGAATCACCGCTGATGGATATGTCGCGTTCGCCGATGATGCTGGTTTACTCAAAGGCGCTTGTGGAAAATCCCTTGCGTCGTTTCCACAAGGCTGTTTTTACTCCACATCGGTTGGAGAATTGAGATGCTACGAGAATCCGAAGAACAAGATAACTGCTGAACCTGCTCCTGAAGAAGAGATCTGGGGTGCAAAATTCAAGGTGGAGGGACCAGCGGCTGTATCAGCCACAGGGTTGGGGTATCACAATTTCCCAATGGAGATTTCATAG ATGTTGGGCGTATTTAGCAGTTCGATTATATCGCCGCCGGACGAACTGGTGGCTGCCGGCTGCCGGACTCCGTCGCCGAAGATATCGTCCACGGCGCTGGCCAAGCGGTTCGCGGATTCCAATACTGCCGCCGTCTCCCTCCAGATCGGTGACCATGTCCACCTCGCCTTCACTCACCACAACGAGTCTCCCTTGCGCCCCAGATCACTGGCAGTGAAGGAGGAGATCTTCTGCTTGTTCGAAGGAGCTCTAGACAATTTGGGGAGCTTGAGGAACCAATACGGCCTTCCCAAATCCACCAATGAAGTTCTCTTAGTTATCGAAGCTTACAAAGCTCTTCGTGATCGAGCTCCATATCCGGTCGACCATGTCGTCGGCCATTTCAGCGGCAGCTTCGCATTCATCCTCTTCGACAACTCCACCTCCACCCTCTTCGTCGCCTCTGATCAGTTCGGGAAGGTGCCTTTGTATTGGGGAATCACCGCTGATGGATATGTCGCGTTCGCCGATGATGCTGGTTTACTCAAAGGCGCTTGTGGAAAATCCCTTGCGTCGTTTCCACAAGGCTGTTTTTACTCCACATCGGTTGGAGAATTGAGATGCTACGAGAATCCGAAGAACAAGATAACTGCTGAACCTGCTCCTGAAGAAGAGATCTGGGGTGCAAAATTCAAGGTGGAGGGACCAGCGGCTGTATCAGCCACAGGGTTGGGGTATCACAATTTCCCAATGGAGATTTCATAG MLGVFSSSIISPPDELVAAGCRTPSPKISSTALAKRFADSNTAAVSLQIGDHVHLAFTHHNESPLRPRSLAVKEEIFCLFEGALDNLGSLRNQYGLPKSTNEVLLVIEAYKALRDRAPYPVDHVVGHFSGSFAFILFDNSTSTLFVASDQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQGCFYSTSVGELRCYENPKNKITAEPAPEEEIWGAKFKVEGPAAVSATGLGYHNFPMEIS Homology
BLAST of Csor.00g259130 vs. ExPASy Swiss-Prot
Match: P24805 (Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.3e-29 Identity = 67/149 (44.97%), Postives = 91/149 (61.07%), Query Frame = 0
BLAST of Csor.00g259130 vs. ExPASy Swiss-Prot
Match: Q5ZJU3 (Asparagine synthetase [glutamine-hydrolyzing] OS=Gallus gallus OX=9031 GN=ASNS PE=2 SV=3) HSP 1 Score: 45.8 bits (107), Expect = 8.1e-04 Identity = 27/97 (27.84%), Postives = 46/97 (47.42%), Query Frame = 0
BLAST of Csor.00g259130 vs. NCBI nr
Match: XP_022959387.1 (stem-specific protein TSJT1-like isoform X2 [Cucurbita moschata] >KAG6575011.1 Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013582.1 Stem-specific protein TSJT1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 502 bits (1293), Expect = 1.89e-179 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of Csor.00g259130 vs. NCBI nr
Match: XP_023006443.1 (stem-specific protein TSJT1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 497 bits (1280), Expect = 1.81e-177 Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of Csor.00g259130 vs. NCBI nr
Match: XP_023548563.1 (stem-specific protein TSJT1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 494 bits (1271), Expect = 4.43e-176 Identity = 245/248 (98.79%), Postives = 246/248 (99.19%), Query Frame = 0
BLAST of Csor.00g259130 vs. NCBI nr
Match: XP_008458563.1 (PREDICTED: stem-specific protein TSJT1-like [Cucumis melo]) HSP 1 Score: 473 bits (1217), Expect = 7.29e-168 Identity = 229/247 (92.71%), Postives = 238/247 (96.36%), Query Frame = 0
BLAST of Csor.00g259130 vs. NCBI nr
Match: XP_038874749.1 (stem-specific protein TSJT1-like [Benincasa hispida]) HSP 1 Score: 472 bits (1214), Expect = 2.09e-167 Identity = 229/247 (92.71%), Postives = 239/247 (96.76%), Query Frame = 0
BLAST of Csor.00g259130 vs. ExPASy TrEMBL
Match: A0A6J1H4E0 (stem-specific protein TSJT1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460374 PE=4 SV=1) HSP 1 Score: 502 bits (1293), Expect = 9.13e-180 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of Csor.00g259130 vs. ExPASy TrEMBL
Match: A0A6J1L4X9 (stem-specific protein TSJT1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499168 PE=4 SV=1) HSP 1 Score: 497 bits (1280), Expect = 8.77e-178 Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 0
BLAST of Csor.00g259130 vs. ExPASy TrEMBL
Match: A0A1S3C892 (stem-specific protein TSJT1-like OS=Cucumis melo OX=3656 GN=LOC103497929 PE=4 SV=1) HSP 1 Score: 473 bits (1217), Expect = 3.53e-168 Identity = 229/247 (92.71%), Postives = 238/247 (96.36%), Query Frame = 0
BLAST of Csor.00g259130 vs. ExPASy TrEMBL
Match: A0A0A0KDR1 (Glutamine amidotransferase type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G154500 PE=4 SV=1) HSP 1 Score: 468 bits (1205), Expect = 2.38e-166 Identity = 227/247 (91.90%), Postives = 236/247 (95.55%), Query Frame = 0
BLAST of Csor.00g259130 vs. ExPASy TrEMBL
Match: A0A6J1CAR8 (stem-specific protein TSJT1-like OS=Momordica charantia OX=3673 GN=LOC111009531 PE=4 SV=1) HSP 1 Score: 464 bits (1194), Expect = 1.13e-164 Identity = 222/247 (89.88%), Postives = 237/247 (95.95%), Query Frame = 0
BLAST of Csor.00g259130 vs. TAIR 10
Match: AT5G19140.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 365.5 bits (937), Expect = 3.3e-101 Identity = 171/233 (73.39%), Postives = 198/233 (84.98%), Query Frame = 0
BLAST of Csor.00g259130 vs. TAIR 10
Match: AT5G19140.2 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 332.0 bits (850), Expect = 4.0e-91 Identity = 159/233 (68.24%), Postives = 186/233 (79.83%), Query Frame = 0
BLAST of Csor.00g259130 vs. TAIR 10
Match: AT5G43830.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 199.1 bits (505), Expect = 4.1e-51 Identity = 100/229 (43.67%), Postives = 143/229 (62.45%), Query Frame = 0
BLAST of Csor.00g259130 vs. TAIR 10
Match: AT3G22850.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 181.8 bits (460), Expect = 6.7e-46 Identity = 93/236 (39.41%), Postives = 137/236 (58.05%), Query Frame = 0
BLAST of Csor.00g259130 vs. TAIR 10
Match: AT3G15450.1 (Aluminium induced protein with YGL and LRDR motifs ) HSP 1 Score: 169.1 bits (427), Expect = 4.5e-42 Identity = 92/239 (38.49%), Postives = 136/239 (56.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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