Csor.00g258480 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g258480
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Auxin-responsive protein
Location	Csor_Chr17: 1046815 .. 1047628 (+)
RNA-Seq Expression	Csor.00g258480
Synteny	Csor.00g258480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCAAGCCTGCGTTTCAGAGCGATCTCAACCTCGAAGCCACCGAGCTTCGTCTCGGACTTCCCGGAATCGCCACTGAAACAGACGACACCCTGGAGAACTCACCCGCGCTTAAAACTAATAACAAGAGAAATTTACAGAATGACTCTGCTCCTCCCCCAAAGTGAGTGATGATTCGTCAAAATCTTTGTGTTATTTGCTCTAAATTCGTGTTTTCTGTTCTTAATTCGTATTTTCCGATGTGGGTTTTGCAGGGCTCAGGTTGTTGGGTGGCCGCCGGTTAGATCTTTCCGGAAAAATACTCTTCAGATGAAGAAACCGGCGACGGCGACGGCGGCGGACTACGGCGGAGGATTCTTCGTGAAAGTGAGTATGGATGGCGCTCCTTATTTGAGGAAGATCGATTTGGGTCTCTACAAAGGGTACCCAGAACTTCTCGAGGCCTTGGAAGACATGTTCAAGTTCACCATCGGTAAGAAAACTCCTGAAGTTCTTCAACTTTTAAATGATTTCTGAGATGAAATAATGTTCTAAGGTAATGAAATTTGGTATCACAGGTCAGTACTCTGAGAGGGAAGGGTATAAGGGATCTGATTTTTCGCTAACATACGAAGATAAAGACGGGGATTGGATGCTTGTCGGCGATGTTCCATGGCAGTAAGTTCTAACTTCTAATGTTCTTCAAAAATTTTAAATCTCAATTGCGAATTTGTTTATAATTTTTGCTCTGTTTCATGAAATTACAGAATGTTCATTTCATCTTGTAAGAGGATGAGAATCATGAAAGGATCGGACGGTTGTGATGTATGA

mRNA sequence

ATGGAATCCAAGCCTGCGTTTCAGAGCGATCTCAACCTCGAAGCCACCGAGCTTCGTCTCGGACTTCCCGGAATCGCCACTGAAACAGACGACACCCTGGAGAACTCACCCGCGCTTAAAACTAATAACAAGAGAAATTTACAGAATGACTCTGCTCCTCCCCCAAAGGCTCAGGTTGTTGGGTGGCCGCCGGTTAGATCTTTCCGGAAAAATACTCTTCAGATGAAGAAACCGGCGACGGCGACGGCGGCGGACTACGGCGGAGGATTCTTCGTGAAAGTGAGTATGGATGGCGCTCCTTATTTGAGGAAGATCGATTTGGGTCTCTACAAAGGGTACCCAGAACTTCTCGAGGCCTTGGAAGACATGTTCAAGTTCACCATCGGTCAGTACTCTGAGAGGGAAGGGTATAAGGGATCTGATTTTTCGCTAACATACGAAGATAAAGACGGGGATTGGATGCTTGTCGGCGATGTTCCATGGCAAATGTTCATTTCATCTTGTAAGAGGATGAGAATCATGAAAGGATCGGACGGTTGTGATGTATGA

Coding sequence (CDS)

ATGGAATCCAAGCCTGCGTTTCAGAGCGATCTCAACCTCGAAGCCACCGAGCTTCGTCTCGGACTTCCCGGAATCGCCACTGAAACAGACGACACCCTGGAGAACTCACCCGCGCTTAAAACTAATAACAAGAGAAATTTACAGAATGACTCTGCTCCTCCCCCAAAGGCTCAGGTTGTTGGGTGGCCGCCGGTTAGATCTTTCCGGAAAAATACTCTTCAGATGAAGAAACCGGCGACGGCGACGGCGGCGGACTACGGCGGAGGATTCTTCGTGAAAGTGAGTATGGATGGCGCTCCTTATTTGAGGAAGATCGATTTGGGTCTCTACAAAGGGTACCCAGAACTTCTCGAGGCCTTGGAAGACATGTTCAAGTTCACCATCGGTCAGTACTCTGAGAGGGAAGGGTATAAGGGATCTGATTTTTCGCTAACATACGAAGATAAAGACGGGGATTGGATGCTTGTCGGCGATGTTCCATGGCAAATGTTCATTTCATCTTGTAAGAGGATGAGAATCATGAAAGGATCGGACGGTTGTGATGTATGA

Protein sequence

MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVVGWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGCDV

Homology

[Close]

BLAST of Csor.00g258480 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.5e-60
Identity = 116/205 (56.59%), Postives = 146/205 (71.22%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTN------------------ 60
           MES+  F+SDLNL+ATELRLGLPG   + D+ L     L+ N                  
Sbjct: 1   MESRVVFESDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKAS 60

Query: 61  -NKRNLQNDSAPPPKAQVVGWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPY 120
            ++++++  SAPPPKA++VGWPP+RS+RKN++Q  +         G G FVKVSMDGAPY
Sbjct: 61  HHQQHVETVSAPPPKAKIVGWPPIRSYRKNSVQEGE---------GDGIFVKVSMDGAPY 120

Query: 121 LRKIDLGLYKGYPELLEALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPW 180
           LRK+DL +Y GYPELL+ALE MFK  IG+YSEREGYKGS+++ TYEDKDGDWMLVGDVPW
Sbjct: 121 LRKVDLKVYGGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPW 180

Query: 181 QMFISSCKRMRIMKGSD----GCDV 183
            MF++SCKR+RIMKGS+    GC V
Sbjct: 181 DMFVTSCKRLRIMKGSEARGLGCVV 196

[Close]

BLAST of Csor.00g258480 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 7.9e-57
Identity = 108/182 (59.34%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQN----DSAPPPK 60
           ME    +   +NL+ATELRLGLPG          N   L    ++ +++    ++A PPK
Sbjct: 1   MEKVDVYDELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPK 60

Query: 61  AQVVGWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPEL 120
           AQ+VGWPPVRS+RKN +Q KK     +   G G +VKVSMDGAPYLRKIDL +YK YPEL
Sbjct: 61  AQIVGWPPVRSYRKNNVQTKK-----SESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPEL 120

Query: 121 LEALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKG 179
           +++LE+MFKF++G+Y EREGYKGSDF  TYEDKDGDWMLVGDVPW+MF+SSCKR+RIMKG
Sbjct: 121 MKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKG 177

[Close]

BLAST of Csor.00g258480 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 111/189 (58.73%), Postives = 131/189 (69.31%), Query Frame = 0


Query: 11  LNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQND-------------SAPPPKA 70
           +NL+ TELRLGLPG      +  E       NNKR L  D             ++PP KA
Sbjct: 5   VNLKETELRLGLPG-TDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKA 64

Query: 71  QVVGWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELL 130
           Q+VGWPPVRS+RKN +Q KK     +   G G +VKVSMDGAPYLRKIDL  YKGY ELL
Sbjct: 65  QIVGWPPVRSYRKNNIQSKK---NESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELL 124

Query: 131 EALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGS 183
           +ALE MFKF++G+Y ER+GYKGSDF  TYEDKDGDWML+GDVPW+MFI +CKR+RIMKGS
Sbjct: 125 KALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGS 184

[Close]

BLAST of Csor.00g258480 vs. ExPASy Swiss-Prot
Match: P49679 (Auxin-induced protein IAA4 OS=Pisum sativum OX=3888 GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-54
Identity = 112/198 (56.57%), Postives = 135/198 (68.18%), Query Frame = 0


Query: 11  LNLEATELRLGLPGIATETD-DTLENSPALKTNNKRNL---------------------Q 70
           +  +ATELRLGLPGI  E +   +  S  +K NNKR L                      
Sbjct: 1   MEFKATELRLGLPGITEEEEKKIIHGSSVVKNNNKRQLPQTSEESVSISKVTNDEHIVES 60

Query: 71  NDSAPPPKAQVVGWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLG 130
           + +APP KA++VGWPP+RS+RKN+L          AD  GG FVKVSMDGAPYLRKIDL 
Sbjct: 61  SSAAPPAKAKIVGWPPIRSYRKNSLH--------EADV-GGIFVKVSMDGAPYLRKIDLR 120

Query: 131 LYKGYPELLEALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSC 183
           +Y GY ELL+ALE MFK TIG+YSEREGYKGS+++ TYEDKDGDWMLVGDVPW MF++SC
Sbjct: 121 VYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSC 180

[Close]

BLAST of Csor.00g258480 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-53
Identity = 107/189 (56.61%), Postives = 133/189 (70.37%), Query Frame = 0


Query: 6   AFQSDLNLEATELRLGLPGIATETDDTLENSPALKTN--------NKRNLQNDS------ 65
           +++ +LNL+ATELRLGLPG      D  E     ++N        ++ ++ N S      
Sbjct: 7   SYEKELNLKATELRLGLPG-----SDEPEKRATARSNKRSSPEASDEESISNGSDVTKED 66

Query: 66  --APPPKAQVVGWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGL 125
              PP KAQVVGWPP+RS+RKN +Q KK   +     G G +VKVSM GAPYLRKIDL +
Sbjct: 67  NVVPPAKAQVVGWPPIRSYRKNNVQQKKEEESE----GNGMYVKVSMAGAPYLRKIDLKV 126

Query: 126 YKGYPELLEALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCK 179
           YK YPELL+ALE+MFK   G+YSEREGY GS+++ TYEDKDGDWMLVGDVPW MF+SSCK
Sbjct: 127 YKSYPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCK 186

[Close]

BLAST of Csor.00g258480 vs. NCBI nr
Match: KAG6574946.1 (Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377 bits (969), Expect = 3.24e-132
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV
Sbjct: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL
Sbjct: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180
           EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180

Query: 181 DV 182
           DV
Sbjct: 181 DV 182

[Close]

BLAST of Csor.00g258480 vs. NCBI nr
Match: XP_022959055.1 (auxin-induced protein 22B-like [Cucurbita moschata])

HSP 1 Score: 373 bits (957), Expect = 1.19e-128
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSP LKTNNKRNLQNDSAPPPKAQVV
Sbjct: 114 MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPGLKTNNKRNLQNDSAPPPKAQVV 173

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLY+GYPELL+AL
Sbjct: 174 GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYEGYPELLKAL 233

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180
           EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC
Sbjct: 234 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 293

Query: 181 DV 182
           DV
Sbjct: 294 DV 295

[Close]

BLAST of Csor.00g258480 vs. NCBI nr
Match: XP_023547374.1 (auxin-induced protein 22B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366 bits (939), Expect = 1.22e-127
Identity = 176/182 (96.70%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MESKPAFQ+DLNLEATELRLGLPGIATETDD+ ENS  LKTNNKRNLQNDSAPPPKAQVV
Sbjct: 1   MESKPAFQTDLNLEATELRLGLPGIATETDDSPENSSGLKTNNKRNLQNDSAPPPKAQVV 60

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELL+AL
Sbjct: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180
           EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180

Query: 181 DV 182
           DV
Sbjct: 181 DV 182

[Close]

BLAST of Csor.00g258480 vs. NCBI nr
Match: XP_023006745.1 (auxin-induced protein 22B-like [Cucurbita maxima])

HSP 1 Score: 362 bits (928), Expect = 5.80e-126
Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MESKPAFQSDLNLEATELRLGLPGIATETDD+ ENSP L+TNNKR LQNDSAPPPKAQVV
Sbjct: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDSPENSPGLRTNNKRILQNDSAPPPKAQVV 60

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPPVRSFRKNTLQMKKPATAT ADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELL+AL
Sbjct: 61  GWPPVRSFRKNTLQMKKPATATVADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180
           EDMFKFTIGQYSEREGYKG DFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC
Sbjct: 121 EDMFKFTIGQYSEREGYKGFDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180

Query: 181 DV 182
           DV
Sbjct: 181 DV 182

[Close]

BLAST of Csor.00g258480 vs. NCBI nr
Match: KAG7013511.1 (Auxin-induced protein 22B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330 bits (847), Expect = 6.93e-114
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV
Sbjct: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60

Query: 61  GWPPVRSFRKNTLQMKKPATATA--ADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLE 120
           GWPPVRSFRKNTLQMKKPATATA  ADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLE
Sbjct: 61  GWPPVRSFRKNTLQMKKPATATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLE 120

Query: 121 ALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQ 162
           ALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQ
Sbjct: 121 ALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQ 164

[Close]

BLAST of Csor.00g258480 vs. ExPASy TrEMBL
Match: A0A6J1H578 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460160 PE=3 SV=1)

HSP 1 Score: 373 bits (957), Expect = 5.74e-129
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSP LKTNNKRNLQNDSAPPPKAQVV
Sbjct: 114 MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPGLKTNNKRNLQNDSAPPPKAQVV 173

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLY+GYPELL+AL
Sbjct: 174 GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYEGYPELLKAL 233

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180
           EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC
Sbjct: 234 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 293

Query: 181 DV 182
           DV
Sbjct: 294 DV 295

[Close]

BLAST of Csor.00g258480 vs. ExPASy TrEMBL
Match: A0A6J1L106 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111499384 PE=3 SV=1)

HSP 1 Score: 362 bits (928), Expect = 2.81e-126
Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MESKPAFQSDLNLEATELRLGLPGIATETDD+ ENSP L+TNNKR LQNDSAPPPKAQVV
Sbjct: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDSPENSPGLRTNNKRILQNDSAPPPKAQVV 60

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPPVRSFRKNTLQMKKPATAT ADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELL+AL
Sbjct: 61  GWPPVRSFRKNTLQMKKPATATVADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180
           EDMFKFTIGQYSEREGYKG DFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC
Sbjct: 121 EDMFKFTIGQYSEREGYKGFDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSDGC 180

Query: 181 DV 182
           DV
Sbjct: 181 DV 182

[Close]

BLAST of Csor.00g258480 vs. ExPASy TrEMBL
Match: A0A0A0LIA8 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1)

HSP 1 Score: 303 bits (775), Expect = 6.81e-103
Identity = 145/178 (81.46%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MES   F +DLNLEATELRLGLPGI +E DD+   S A+K NNKRN QNDSAPPPKAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPP+RSFRKNTLQ+KK    T A  GGG +VKVSMDGAPYLRKIDL +YKGYPELL+AL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSD 178
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGS+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSE 178

[Close]

BLAST of Csor.00g258480 vs. ExPASy TrEMBL
Match: A0A5A7UVE4 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001650 PE=3 SV=1)

HSP 1 Score: 301 bits (772), Expect = 1.95e-102
Identity = 144/178 (80.90%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MES   F +DLNLEATELRLGLPG+ +E DD+   S A+K NNKRN QNDSAPPPKAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPP+RSFRKNTLQ+KK    TAA  GGG +VKVSMDGAPYLRKIDL +YKGYPE L+AL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSD 178
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGS+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSE 178

[Close]

BLAST of Csor.00g258480 vs. ExPASy TrEMBL
Match: A0A1S3BMB6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103491213 PE=3 SV=1)

HSP 1 Score: 301 bits (772), Expect = 1.95e-102
Identity = 144/178 (80.90%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQNDSAPPPKAQVV 60
           MES   F +DLNLEATELRLGLPG+ +E DD+   S A+K NNKRN QNDSAPPPKAQVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEAL 120
           GWPP+RSFRKNTLQ+KK    TAA  GGG +VKVSMDGAPYLRKIDL +YKGYPE L+AL
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKAL 120

Query: 121 EDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSD 178
           EDMFKFTIGQYSEREGYKGSDF+ TYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGS+
Sbjct: 121 EDMFKFTIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSE 178

[Close]

BLAST of Csor.00g258480 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 221.5 bits (563), Expect = 5.6e-58
Identity = 108/182 (59.34%), Postives = 135/182 (74.18%), Query Frame = 0


Query: 1   MESKPAFQSDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQN----DSAPPPK 60
           ME    +   +NL+ATELRLGLPG          N   L    ++ +++    ++A PPK
Sbjct: 1   MEKVDVYDELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPK 60

Query: 61  AQVVGWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPEL 120
           AQ+VGWPPVRS+RKN +Q KK     +   G G +VKVSMDGAPYLRKIDL +YK YPEL
Sbjct: 61  AQIVGWPPVRSYRKNNVQTKK-----SESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPEL 120

Query: 121 LEALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKG 179
           +++LE+MFKF++G+Y EREGYKGSDF  TYEDKDGDWMLVGDVPW+MF+SSCKR+RIMKG
Sbjct: 121 MKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKG 177

[Close]

BLAST of Csor.00g258480 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 214.2 bits (544), Expect = 9.0e-56
Identity = 111/189 (58.73%), Postives = 131/189 (69.31%), Query Frame = 0


Query: 11  LNLEATELRLGLPGIATETDDTLENSPALKTNNKRNLQND-------------SAPPPKA 70
           +NL+ TELRLGLPG      +  E       NNKR L  D             ++PP KA
Sbjct: 5   VNLKETELRLGLPG-TDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKA 64

Query: 71  QVVGWPPVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELL 130
           Q+VGWPPVRS+RKN +Q KK     +   G G +VKVSMDGAPYLRKIDL  YKGY ELL
Sbjct: 65  QIVGWPPVRSYRKNNIQSKK---NESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELL 124

Query: 131 EALEDMFKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGS 183
           +ALE MFKF++G+Y ER+GYKGSDF  TYEDKDGDWML+GDVPW+MFI +CKR+RIMKGS
Sbjct: 125 KALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGS 184

[Close]

BLAST of Csor.00g258480 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-52
Identity = 108/172 (62.79%), Postives = 127/172 (73.84%), Query Frame = 0


Query: 11  LNLEATELRLGLPGIATETDDTLENSPALKTNNKR---NLQNDSAPPP-KAQVVGWPPVR 70
           LNL+ TELRLGLPG   + +  LE S  +++NNKR   +   +SAPPP K Q+VGWPPVR
Sbjct: 7   LNLKDTELRLGLPG--AQEEQQLELS-CVRSNNKRKNNDSTEESAPPPAKTQIVGWPPVR 66

Query: 71  SFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEALEDMFKF 130
           S RKN                   +VKVSMDGAPYLRKIDL +YK YPELL+ALE+MFKF
Sbjct: 67  SNRKNNNNKNVS------------YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKF 126

Query: 131 TIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSD 179
           T+G+YSEREGYKGS F  TYEDKDGDWMLVGDVPW MF SSC+++RIMKGS+
Sbjct: 127 TVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163

[Close]

BLAST of Csor.00g258480 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 201.1 bits (510), Expect = 7.9e-52
Identity = 106/175 (60.57%), Postives = 122/175 (69.71%), Query Frame = 0


Query: 9   SDLNLEATELRLGLPGIATETDDTLENSPALKTNNKRNL-----QNDSAPPPKAQVVGWP 68
           ++LNL+ TEL LGLPG   +  +  E S  +K+NNKR       + +S PP K Q+VGWP
Sbjct: 7   NELNLKDTELCLGLPGRTEKIKEEQEVS-CVKSNNKRLFEETRDEEESTPPTKTQIVGWP 66

Query: 69  PVRSFRKNTLQMKKPATATAADYGGGFFVKVSMDGAPYLRKIDLGLYKGYPELLEALEDM 128
           PVRS RKN   +               +VKVSMDGAPYLRKIDL  YK YPELL+ALE+M
Sbjct: 67  PVRSSRKNNNSVS--------------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENM 126

Query: 129 FKFTIGQYSEREGYKGSDFSLTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSD 179
           FK  IG+Y EREGYKGS F  TYEDKDGDWMLVGDVPW MF SSCKR+RIMKGSD
Sbjct: 127 FKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSD 166

[Close]

BLAST of Csor.00g258480 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42
Identity = 108/220 (49.09%), Postives = 128/220 (58.18%), Query Frame = 0


Query: 11  LNLEATELRLGLPG---------------IATETDDTLEN--SPALKTNNKRNLQNDS-- 70
           +N EATELRLGLPG                 +ET D   N  S A+ + +K +L+N    
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 71  --APPPKAQVVGWPPVRSFRKNTLQMKKP-----------------ATATAADYGGGFFV 130
              PP KAQVVGWPPVRSFRKN +  +KP                 AT++A+      +V
Sbjct: 62  VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYV 121

Query: 131 KVSMDGAPYLRKIDLGLYKGYPELLEALEDMF-KFTIGQYSEREGYK------------- 179
           KVSMDGAPYLRKIDL LYK Y +L  AL  MF  FTIG Y   +G K             
Sbjct: 122 KVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGP-QGMKDFMNESKLIDLLN 181

The following BLAST results are available for this feature:

BLAST of Csor.00g258480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32294	4.5e-60	56.59	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]
P33077	7.9e-57	59.34	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
Q38822	1.3e-54	58.73	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
P49679	2.8e-54	56.57	Auxin-induced protein IAA4 OS=Pisum sativum OX=3888 GN=IAA4/5 PE=1 SV=1	[more]
O24542	1.8e-53	56.61	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]

BLAST of Csor.00g258480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574946.1	3.24e-132	100.00	Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022959055.1	1.19e-128	98.35	auxin-induced protein 22B-like [Cucurbita moschata]	[more]
XP_023547374.1	1.22e-127	96.70	auxin-induced protein 22B-like [Cucurbita pepo subsp. pepo]	[more]
XP_023006745.1	5.80e-126	95.60	auxin-induced protein 22B-like [Cucurbita maxima]	[more]
KAG7013511.1	6.93e-114	98.78	Auxin-induced protein 22B [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g258480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H578	5.74e-129	98.35	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111460160 PE=3 SV=1	[more]
A0A6J1L106	2.81e-126	95.60	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111499384 PE=3 SV=1	[more]
A0A0A0LIA8	6.81e-103	81.46	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1	[more]
A0A5A7UVE4	1.95e-102	80.90	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BMB6	1.95e-102	80.90	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103491213 PE=3 SV=1	[more]

BLAST of Csor.00g258480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43700.1	5.6e-58	59.34	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	9.0e-56	58.73	AUX/IAA transcriptional regulator family protein	[more]
AT4G14560.1	1.6e-52	62.79	indole-3-acetic acid inducible	[more]
AT3G23030.1	7.9e-52	60.57	indole-3-acetic acid inducible 2	[more]
AT3G04730.1	1.5e-42	49.09	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 40..179 e-value: 2.3E-57 score: 194.7
None	No IPR available	GENE3D	3.10.20.90		coord: 85..182 e-value: 8.3E-43 score: 146.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..58
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 4..178
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 83..175
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 4..178
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 89..176 score: 27.120188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g258480.m01	Csor.00g258480.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding