Csor.00g257960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g257960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	60S ribosomal protein L23
Location	Csor_Chr17: 758604 .. 760175 (+)
RNA-Seq Expression	Csor.00g257960
Synteny	Csor.00g257960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAGCGAGGTAAGCGAACCCTTGTGCCTCTCCTCTTCGTTCTTCGCAGTTTCACCATCTAGATTTTGGGTTTAGGTTTCGTTTACGTTCTTCCTGTGTTCTTTTCTCGCCGGAAAATCATGTTCTTGTTTCATTTGCTTTGGAAGTACCCATTTTTGGGGGCTTTTTATTGAATCTGTATCGAATCCACAATTTCCTAGTGGAGGAGTGATCGATTTGCCATGTGTGAACTCTGGAATGTGTATGATCGATCTGCTTCTTGTTGGTGCAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTTGGTCTACCGGTGGCAGCGACGGTGAATTGTGCTGACAACACTGGAGCTAAGAACCTGTACATCATCTCAGTGAAGGGTATCAAGGGGCGTTTGAACAGATTGCCATCGGCTTGTGTTGGAGATATGGTGATGGCCACTGTCAAGAAGGGAAAGCCCGATCTCAGGAAAAAGGTTCTTCCAGCTGTCATTGTCAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTCATGTACTTCGAAGGTATATAATACATATGTTTCTCTTGATAGGCTCCAAATTTACTTGTTTGAGAGCACTATGGTACACATGTTCGAACTTGACCTGGATTTGCATTTGCCTGTTGACGTTTGCTATCTATCACGTTTTGTCTTTGAACTCTTATTTGTGTCTTCAGGTTTTTGTTATTACTGGTTTTCTTGCTGAATTGTGATTGCTTGCAATTGTTCGAACCTGAGAACCCCATGATTAACATGTCTGTTGAAGCTAGATAGATGTTTTCAGTCCATTTATTCTCTATTTCTAACATGGTTCTGTGAGGAATAGATATCAAACATATCCGAATTTTGAGTTGCATAGATGTTTATTTTACTTTTCACTATGGGATGTAGTACCGGCGGCGGCTCATTGGGCTAAAATAACCACAAATACGGCCCCAAATATTCTAATATAATAGAAACCAAGTTTAGAAAGTAAAATCGAAAGCAACATGTTTTCTGTTAATTTGATTAAAAAGTACCCAAGTTCATCGTTTGGACCCCATCTATTTTCCAGGCATAAGTCAGCTATCTTCCTTGTTGTAATGGTTGAAACTGTTATGGGTCTTGTAATTTGACAGTCTTCATCATTGAAGATGTGTGGAAGCTTTCACGCTCATATCCTCTGCTCCTTGTGGAGATAACATTGTTCATTTCAAAATAATTCCATTCTTGGTCTCATTCTGCCATTTAGTATGATATTATCCGTATAGAAATTTTGTTTTAATACACGTGTGTATATCACATCGGTATTTGATTTCGAAATGTATATTGTGGCTGCAGATAACGCTGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTATTGACCCATTCACCAGATGAAAATGCTCATTCTCCTAGTCTTTTAATCTTGCAAGGTTATGAAGTTCGTTTGTTGCTGCTGTTGCAGGTTCTGCAATCACAGGCCCCATCGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTTTAG

mRNA sequence

ATGTCGAAGCGAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTTGGTCTACCGGTGGCAGCGACGGTGAATTGTGCTGACAACACTGGAGCTAAGAACCTGTACATCATCTCAGTGAAGGGTATCAAGGGGCGTTTGAACAGATTGCCATCGGCTTGTGTTGGAGATATGGTGATGGCCACTGTCAAGAAGGGAAAGCCCGATCTCAGGAAAAAGGTTCTTCCAGCTGTCATTGTCAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTCATGTACTTCGAAGATAACGCTGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTTCTGCAATCACAGGCCCCATCGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTTTAG

Coding sequence (CDS)

ATGTCGAAGCGAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTTGGTCTACCGGTGGCAGCGACGGTGAATTGTGCTGACAACACTGGAGCTAAGAACCTGTACATCATCTCAGTGAAGGGTATCAAGGGGCGTTTGAACAGATTGCCATCGGCTTGTGTTGGAGATATGGTGATGGCCACTGTCAAGAAGGGAAAGCCCGATCTCAGGAAAAAGGTTCTTCCAGCTGTCATTGTCAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTCATGTACTTCGAAGATAACGCTGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTTCTGCAATCACAGGCCCCATCGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTTTAG

Protein sequence

MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV

Homology

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BLAST of Csor.00g257960 vs. ExPASy Swiss-Prot
Match: P49690 (60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3)

HSP 1 Score: 281.2 bits (718), Expect = 6.5e-75
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 141
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

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BLAST of Csor.00g257960 vs. ExPASy Swiss-Prot
Match: Q07760 (60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.2e-74
Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAV+VRQRKPWRRKDGVFMYFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 141
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

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BLAST of Csor.00g257960 vs. ExPASy Swiss-Prot
Match: Q9XEK8 (60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 3.4e-68
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS  G++GRLNRLP+A VGDM
Sbjct: 1   MSKRGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEM  SAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 141
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 139

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BLAST of Csor.00g257960 vs. ExPASy Swiss-Prot
Match: Q6PC14 (60S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.0e-63
Identity = 119/139 (85.61%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           + KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139

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BLAST of Csor.00g257960 vs. ExPASy Swiss-Prot
Match: Q3T057 (60S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2)

HSP 1 Score: 241.9 bits (616), Expect = 4.4e-63
Identity = 118/139 (84.89%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           + KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139

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BLAST of Csor.00g257960 vs. NCBI nr
Match: XP_004296407.1 (PREDICTED: 60S ribosomal protein L23 [Fragaria vesca subsp. vesca] >XP_004486225.1 60S ribosomal protein L23 [Cicer arietinum] >XP_004493817.1 60S ribosomal protein L23 [Cicer arietinum] >XP_004495066.1 60S ribosomal protein L23 [Cicer arietinum] >XP_007144856.1 hypothetical protein PHAVU_007G189900g [Phaseolus vulgaris] >XP_007162592.1 hypothetical protein PHAVU_001G164200g [Phaseolus vulgaris] >XP_007207356.1 60S ribosomal protein L23 [Prunus persica] >XP_007227549.1 60S ribosomal protein L23 [Prunus persica] >XP_008218349.1 PREDICTED: 60S ribosomal protein L23 [Prunus mume] >XP_008224171.1 PREDICTED: 60S ribosomal protein L23 [Prunus mume] >XP_008340651.1 60S ribosomal protein L23 [Malus domestica] >XP_009334189.1 PREDICTED: 60S ribosomal protein L23 [Pyrus x bretschneideri] >XP_009343781.1 PREDICTED: 60S ribosomal protein L23 [Pyrus x bretschneideri] >XP_009357984.1 PREDICTED: 60S ribosomal protein L23 [Pyrus x bretschneideri] >XP_015901171.1 60S ribosomal protein L23 [Ziziphus jujuba] >XP_018807842.1 60S ribosomal protein L23 [Juglans regia] >XP_018827330.1 60S ribosomal protein L23 [Juglans regia] >XP_019429042.1 PREDICTED: 60S ribosomal protein L23 [Lupinus angustifolius] >XP_019429519.1 PREDICTED: 60S ribosomal protein L23 [Lupinus angustifolius] >XP_019429977.1 PREDICTED: 60S ribosomal protein L23 [Lupinus angustifolius] >XP_019440973.1 PREDICTED: 60S ribosomal protein L23 [Lupinus angustifolius] >XP_019456481.1 PREDICTED: 60S ribosomal protein L23 [Lupinus angustifolius] >XP_019456482.1 PREDICTED: 60S ribosomal protein L23 [Lupinus angustifolius] >XP_019461970.1 PREDICTED: 60S ribosomal protein L23 [Lupinus angustifolius] >XP_021828975.1 60S ribosomal protein L23-like [Prunus avium] >XP_022138768.1 60S ribosomal protein L23 [Momordica charantia] >XP_022155670.1 60S ribosomal protein L23 [Momordica charantia] >XP_022157532.1 60S ribosomal protein L23 isoform X2 [Momordica charantia] >XP_022931050.1 60S ribosomal protein L23 [Cucurbita moschata] >XP_022954154.1 60S ribosomal protein L23 [Cucurbita moschata] >XP_022954155.1 60S ribosomal protein L23 [Cucurbita moschata] >XP_022959255.1 60S ribosomal protein L23 [Cucurbita moschata] >XP_022960439.1 60S ribosomal protein L23 [Cucurbita moschata] >XP_022963606.1 60S ribosomal protein L23 [Cucurbita moschata] >XP_022964538.1 60S ribosomal protein L23 [Cucurbita moschata] >XP_022967349.1 60S ribosomal protein L23 [Cucurbita maxima] >XP_022991701.1 60S ribosomal protein L23 [Cucurbita maxima] >XP_022991702.1 60S ribosomal protein L23 [Cucurbita maxima] >XP_022996212.1 60S ribosomal protein L23 [Cucurbita maxima] >XP_023000561.1 60S ribosomal protein L23 [Cucurbita maxima] >XP_023005094.1 60S ribosomal protein L23 [Cucurbita maxima] >XP_023006089.1 60S ribosomal protein L23 [Cucurbita maxima] >XP_023515110.1 60S ribosomal protein L23 [Cucurbita pepo subsp. pepo] >XP_023515190.1 60S ribosomal protein L23 [Cucurbita pepo subsp. pepo] >XP_023532400.1 60S ribosomal protein L23 [Cucurbita pepo subsp. pepo] >XP_023547977.1 60S ribosomal protein L23 [Cucurbita pepo subsp. pepo] >XP_023548182.1 60S ribosomal protein L23 [Cucurbita pepo subsp. pepo] >XP_023553687.1 60S ribosomal protein L23 [Cucurbita pepo subsp. pepo] >XP_023879824.1 60S ribosomal protein L23 [Quercus suber] >XP_023887452.1 60S ribosomal protein L23 [Quercus suber] >XP_024195178.1 60S ribosomal protein L23 [Rosa chinensis] >XP_028946715.1 60S ribosomal protein L23 [Malus domestica] >XP_028957412.1 60S ribosomal protein L23 [Malus domestica] >XP_030499120.1 60S ribosomal protein L23 [Cannabis sativa] >XP_030507771.1 60S ribosomal protein L23 [Cannabis sativa] >XP_030933958.1 60S ribosomal protein L23 isoform X1 [Quercus lobata] >XP_030974787.1 60S ribosomal protein L23 [Quercus lobata] >XP_034211471.1 60S ribosomal protein L23 [Prunus dulcis] >XP_034218586.1 60S ribosomal protein L23 [Prunus dulcis] >XP_035548350.1 60S ribosomal protein L23 [Juglans regia] >XP_038876055.1 60S ribosomal protein L23 [Benincasa hispida] >XP_038876056.1 60S ribosomal protein L23 [Benincasa hispida] >XP_038886983.1 60S ribosomal protein L23 [Benincasa hispida] >XP_038906519.1 60S ribosomal protein L23 [Benincasa hispida] >XP_038906730.1 60S ribosomal protein L23 [Benincasa hispida] >XP_041001342.1 60S ribosomal protein L23 [Juglans microcarpa x Juglans regia] >XP_041004696.1 60S ribosomal protein L23 [Juglans microcarpa x Juglans regia] >XP_041024349.1 60S ribosomal protein L23 [Juglans microcarpa x Juglans regia] >XP_042942209.1 60S ribosomal protein L23 [Carya illinoinensis] >XP_042967388.1 60S ribosomal protein L23 [Carya illinoinensis] >XP_042973814.1 60S ribosomal protein L23 [Carya illinoinensis] >XP_042973815.1 60S ribosomal protein L23 [Carya illinoinensis] >AAK25758.1 ribosomal protein L17 [Castanea sativa] >AFK34301.1 unknown [Lotus japonicus] >KAB1212064.1 60S ribosomal protein L23 [Morella rubra] >KAB2599894.1 60S ribosomal protein L23-like [Pyrus ussuriensis x Pyrus communis] >KAE9591015.1 putative ribosomal protein L14P [Lupinus albus] >KAF3436095.1 hypothetical protein FNV43_RR23187 [Rhamnella rubrinervis] >KAF3967416.1 hypothetical protein CMV_008583 [Castanea mollissima] >KAG6571545.1 60S ribosomal protein L23, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013467.1 60S ribosomal protein L23, partial [Cucurbita argyrosperma subsp. argyrosperma] >PNY17244.1 60S ribosomal protein l23-like [Trifolium pratense] >PQQ18962.1 60S ribosomal protein L23 [Prunus yedoensis var. nudiflora] >TQE08390.1 hypothetical protein C1H46_006018 [Malus baccata] >CAB4292424.1 unnamed protein product [Prunus armeniaca] >GAU19371.1 hypothetical protein TSUD_336580 [Trifolium subterraneum])

HSP 1 Score: 282 bits (721), Expect = 8.97e-96
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. NCBI nr
Match: KAF5465863.1 (hypothetical protein F2P56_015830, partial [Juglans regia])

HSP 1 Score: 282 bits (721), Expect = 1.55e-95
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 17  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 76

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 77  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 136

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 137 IGKECADLWPRIASAANAIV 156

[Close]

BLAST of Csor.00g257960 vs. NCBI nr
Match: NP_001274965.1 (ribosomal protein L17-like protein [Solanum tuberosum] >NP_001296814.1 60S ribosomal protein L23 [Solanum lycopersicum] >XP_002301852.1 60S ribosomal protein L23 [Populus trichocarpa] >XP_002312599.1 60S ribosomal protein L23 [Populus trichocarpa] >XP_002315585.1 60S ribosomal protein L23 [Populus trichocarpa] >XP_003570378.1 60S ribosomal protein L23 [Brachypodium distachyon] >XP_003574026.1 60S ribosomal protein L23 [Brachypodium distachyon] >XP_004240479.1 60S ribosomal protein L23 [Solanum lycopersicum] >XP_004247766.1 60S ribosomal protein L23 [Solanum lycopersicum] >XP_006358421.1 PREDICTED: 60S ribosomal protein L23 [Solanum tuberosum] >XP_006364561.1 PREDICTED: 60S ribosomal protein L23 [Solanum tuberosum] >XP_006420330.1 60S ribosomal protein L23 [Citrus clementina] >XP_006443749.1 60S ribosomal protein L23 [Citrus clementina] >XP_006479455.1 60S ribosomal protein L23 [Citrus sinensis] >XP_006489646.1 60S ribosomal protein L23 [Citrus sinensis] >XP_009627849.1 60S ribosomal protein L23-like [Nicotiana tomentosiformis] >XP_009788852.1 PREDICTED: 60S ribosomal protein L23-like [Nicotiana sylvestris] >XP_010023855.1 60S ribosomal protein L23 isoform X1 [Eucalyptus grandis] >XP_010326636.1 60S ribosomal protein L23 [Solanum lycopersicum] >XP_010670947.1 PREDICTED: 60S ribosomal protein L23 [Beta vulgaris subsp. vulgaris] >XP_010684890.1 PREDICTED: 60S ribosomal protein L23 [Beta vulgaris subsp. vulgaris] >XP_011013441.1 PREDICTED: 60S ribosomal protein L23 [Populus euphratica] >XP_011024466.1 PREDICTED: 60S ribosomal protein L23 [Populus euphratica] >XP_015079963.1 60S ribosomal protein L23 [Solanum pennellii] >XP_015086201.1 60S ribosomal protein L23 [Solanum pennellii] >XP_015088614.1 60S ribosomal protein L23 [Solanum pennellii] >XP_016499113.1 PREDICTED: 60S ribosomal protein L23-like [Nicotiana tabacum] >XP_016516133.1 PREDICTED: 60S ribosomal protein L23-like [Nicotiana tabacum] >XP_017215492.1 PREDICTED: 60S ribosomal protein L23 [Daucus carota subsp. sativus] >XP_017220352.1 PREDICTED: 60S ribosomal protein L23 [Daucus carota subsp. sativus] >XP_019071233.1 60S ribosomal protein L23 [Solanum lycopersicum] >XP_019165614.1 PREDICTED: 60S ribosomal protein L23 [Ipomoea nil] >XP_019178217.1 PREDICTED: 60S ribosomal protein L23 [Ipomoea nil] >XP_019188410.1 PREDICTED: 60S ribosomal protein L23 [Ipomoea nil] >XP_019240590.1 PREDICTED: 60S ribosomal protein L23-like [Nicotiana attenuata] >XP_020186197.1 60S ribosomal protein L23 [Aegilops tauschii subsp. strangulata] >XP_020193211.1 60S ribosomal protein L23 [Aegilops tauschii subsp. strangulata] >XP_021975944.1 60S ribosomal protein L23 [Helianthus annuus] >XP_021987334.1 60S ribosomal protein L23 [Helianthus annuus] >XP_022010792.1 60S ribosomal protein L23 [Helianthus annuus] >XP_022849442.1 60S ribosomal protein L23 [Olea europaea var. sylvestris] >XP_022872658.1 60S ribosomal protein L23 [Olea europaea var. sylvestris] >XP_023733411.1 60S ribosomal protein L23 [Lactuca sativa] >XP_023737947.1 60S ribosomal protein L23 [Lactuca sativa] >XP_023747380.1 60S ribosomal protein L23 [Lactuca sativa] >XP_023759742.1 60S ribosomal protein L23 [Lactuca sativa] >XP_024974358.1 60S ribosomal protein L23 [Cynara cardunculus var. scolymus] >XP_024981483.1 60S ribosomal protein L23 [Cynara cardunculus var. scolymus] >XP_024983233.1 60S ribosomal protein L23 [Cynara cardunculus var. scolymus] >XP_024985794.1 60S ribosomal protein L23 [Cynara cardunculus var. scolymus] >XP_031099639.1 60S ribosomal protein L23 [Ipomoea triloba] >XP_034685971.1 60S ribosomal protein L23 [Vitis riparia] >XP_034914635.1 60S ribosomal protein L23 [Populus alba] >XP_034916106.1 60S ribosomal protein L23 [Populus alba] >XP_034926216.1 60S ribosomal protein L23 [Populus alba] >XP_037405973.1 60S ribosomal protein L23 [Triticum dicoccoides] >XP_037448955.1 60S ribosomal protein L23 [Triticum dicoccoides] >XP_037450531.1 60S ribosomal protein L23 [Triticum dicoccoides] >XP_037454016.1 60S ribosomal protein L23 [Triticum dicoccoides] >XP_038698546.1 60S ribosomal protein L23 [Tripterygium wilfordii] >XP_038712860.1 60S ribosomal protein L23 isoform X1 [Tripterygium wilfordii] >XP_038718581.1 60S ribosomal protein L23 [Tripterygium wilfordii] >XP_038720577.1 60S ribosomal protein L23 isoform X1 [Tripterygium wilfordii] >XP_038722208.1 60S ribosomal protein L23 [Tripterygium wilfordii] >XP_039116732.1 60S ribosomal protein L23 [Dioscorea cayenensis subsp. rotundata] >XP_039125584.1 60S ribosomal protein L23 [Dioscorea cayenensis subsp. rotundata] >XP_039131607.1 60S ribosomal protein L23 [Dioscorea cayenensis subsp. rotundata] >XP_041991708.1 60S ribosomal protein L23 [Salvia splendens] >XP_041995162.1 60S ribosomal protein L23 [Salvia splendens] >XP_042014671.1 60S ribosomal protein L23 [Salvia splendens] >XP_042016530.1 60S ribosomal protein L23 [Salvia splendens] >XP_042018109.1 60S ribosomal protein L23 [Salvia splendens] >XP_042056164.1 60S ribosomal protein L23 [Salvia splendens] >XP_042058534.1 60S ribosomal protein L23 [Salvia splendens] >XP_042062101.1 60S ribosomal protein L23 [Salvia splendens] >XP_042494904.1 60S ribosomal protein L23 [Macadamia integrifolia] >XP_042512362.1 60S ribosomal protein L23 [Macadamia integrifolia] >4V3P_LM Chain LM, Ribosomal Pr 117 [Triticum aestivum] >4V7E_CV Chain CV, 60S ribosomal protein L14 [Triticum aestivum] >EMS50725.1 60S ribosomal protein L23 [Triticum urartu] >KAA8543413.1 hypothetical protein F0562_021092 [Nyssa sinensis] >KAB5569855.1 hypothetical protein DKX38_003648 [Salix brachista] >KAD3336566.1 hypothetical protein E3N88_32085 [Mikania micrantha] >KAE8766735.1 ribosomal protein L17-like protein [Hordeum vulgare] >KAE9460762.1 hypothetical protein C3L33_07360, partial [Rhododendron williamsianum] >KAF5193790.1 50S ribosomal protein L14 [Thalictrum thalictroides] >KAF6144448.1 hypothetical protein GIB67_024675 [Kingdonia uniflora] >KAF7120632.1 hypothetical protein RHSIM_Rhsim13G0039500 [Rhododendron simsii] >KAF8015769.1 hypothetical protein BT93_H1337 [Corymbia citriodora subsp. variegata] >KAF9846806.1 hypothetical protein H0E87_021442 [Populus deltoides] >KAG5236400.1 ribosomal protein [Salix suchowensis] >KAG5514649.1 hypothetical protein RHGRI_035897 [Rhododendron griersonianum] >KAG5587514.1 hypothetical protein H5410_047948 [Solanum commersonii] >KAG6759181.1 hypothetical protein POTOM_035650 [Populus tomentosa] >KAG8370836.1 hypothetical protein BUALT_Bualt13G0024800 [Buddleja alternifolia] >KAG9143549.1 hypothetical protein Leryth_015973 [Lithospermum erythrorhizon] >PIA36249.1 hypothetical protein AQUCO_03400273v1 [Aquilegia coerulea] >PSR89738.1 60S ribosomal protein L23 [Actinidia chinensis var. chinensis] >PWA85604.1 ribosomal protein L17-like protein [Artemisia annua] >RWR81195.1 ribosomal protein 117 [Cinnamomum micranthum f. kanehirae] >TMW89280.1 hypothetical protein EJD97_017423 [Solanum chilense] >TXG63884.1 hypothetical protein EZV62_010878 [Acer yangbiense] >CAA2622960.1 unnamed protein product [Spirodela intermedia] >CAA3001590.1 60S ribosomal L23 [Olea europaea subsp. europaea] >CAB4080715.1 unnamed protein product [Lactuca saligna] >VAH04113.1 unnamed protein product [Triticum turgidum subsp. durum] >BAJ86704.1 predicted protein [Hordeum vulgare subsp. vulgare] >GAV74801.1 Ribosomal_L14 domain-containing protein, partial [Cephalotus follicularis] >GAY40243.1 hypothetical protein CUMW_050480 [Citrus unshiu] >GFP85399.1 60S ribosomal protein l23 [Phtheirospermum japonicum] >GFY82799.1 ribosomal protein L14p/L23e family protein [Actinidia rufa])

HSP 1 Score: 281 bits (719), Expect = 1.81e-95
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. NCBI nr
Match: XP_004289983.1 (PREDICTED: 60S ribosomal protein L23-like [Fragaria vesca subsp. vesca] >XP_024167379.1 60S ribosomal protein L23 [Rosa chinensis] >PRQ25730.1 putative ribosomal protein L14P [Rosa chinensis])

HSP 1 Score: 281 bits (719), Expect = 1.81e-95
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAV+VRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. NCBI nr
Match: AAP80667.1 (ribosomal Pr 117, partial [Triticum aestivum])

HSP 1 Score: 281 bits (719), Expect = 2.30e-95
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 8   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 67

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 68  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 127

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 128 IGKECADLWPRIASAANAIV 147

[Close]

BLAST of Csor.00g257960 vs. ExPASy TrEMBL
Match: A0A6J1HWG1 (60S ribosomal protein L23 OS=Cucurbita maxima OX=3661 GN=LOC111466895 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 4.34e-96
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. ExPASy TrEMBL
Match: M5WP13 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G047000 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 4.34e-96
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. ExPASy TrEMBL
Match: A0A6A5ND05 (Putative ribosomal protein L14P OS=Lupinus albus OX=3870 GN=Lal_00022109 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 4.34e-96
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. ExPASy TrEMBL
Match: A0A5N5FNP6 (60S ribosomal protein L23-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_010165 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 4.34e-96
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. ExPASy TrEMBL
Match: A0A7J6G5C7 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_009005 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 4.34e-96
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 281.2 bits (718), Expect = 4.6e-76
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 141
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. TAIR 10
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 281.2 bits (718), Expect = 4.6e-76
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 141
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. TAIR 10
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 281.2 bits (718), Expect = 4.6e-76
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 141
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

[Close]

BLAST of Csor.00g257960 vs. TAIR 10
Match: AT3G04400.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 255.0 bits (650), Expect = 3.5e-68
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 16  MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 75
           MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK
Sbjct: 1   MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 60

Query: 76  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 135
           VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA
Sbjct: 61  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 120

Query: 136 ANAIV 141
           ANAIV
Sbjct: 121 ANAIV 125

[Close]

BLAST of Csor.00g257960 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 )

HSP 1 Score: 68.2 bits (165), Expect = 6.1e-12
Identity = 40/119 (33.61%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AVIV
Sbjct: 8   LNVADNSGARELMCIRIIGASNR----RYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 67

Query: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 141
           R  K  +R +G  + ++DNA V+++ +G  KG+ + G I +E   L + +I S A  ++
Sbjct: 68  RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEVL 122

The following BLAST results are available for this feature:

BLAST of Csor.00g257960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49690	6.5e-75	98.57	60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3	[more]
Q07760	3.2e-74	97.14	60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1	[more]
Q9XEK8	3.4e-68	90.71	60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1	[more]
Q6PC14	2.0e-63	85.61	60S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1	[more]
Q3T057	4.4e-63	84.89	60S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2	[more]

BLAST of Csor.00g257960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004296407.1	8.97e-96	100.00	PREDICTED: 60S ribosomal protein L23 [Fragaria vesca subsp. vesca] >XP_004486225...	[more]
KAF5465863.1	1.55e-95	100.00	hypothetical protein F2P56_015830, partial [Juglans regia]	[more]
NP_001274965.1	1.81e-95	99.29	ribosomal protein L17-like protein [Solanum tuberosum] >NP_001296814.1 60S ribos...	[more]
XP_004289983.1	1.81e-95	98.57	PREDICTED: 60S ribosomal protein L23-like [Fragaria vesca subsp. vesca] >XP_0241...	[more]
AAP80667.1	2.30e-95	99.29	ribosomal Pr 117, partial [Triticum aestivum]	[more]

BLAST of Csor.00g257960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HWG1	4.34e-96	100.00	60S ribosomal protein L23 OS=Cucurbita maxima OX=3661 GN=LOC111466895 PE=3 SV=1	[more]
M5WP13	4.34e-96	100.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G047000 PE=3 SV=1	[more]
A0A6A5ND05	4.34e-96	100.00	Putative ribosomal protein L14P OS=Lupinus albus OX=3870 GN=Lal_00022109 PE=3 SV...	[more]
A0A5N5FNP6	4.34e-96	100.00	60S ribosomal protein L23-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 ...	[more]
A0A7J6G5C7	4.34e-96	100.00	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_009005 PE=3 SV=1	[more]

BLAST of Csor.00g257960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04480.1	4.6e-76	98.57	Ribosomal protein L14p/L23e family protein	[more]
AT2G33370.1	4.6e-76	98.57	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.1	4.6e-76	98.57	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.2	3.5e-68	100.00	Ribosomal protein L14p/L23e family protein	[more]
ATCG00780.1	6.1e-12	33.61	ribosomal protein L14	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000218	Ribosomal protein L14P	SMART	SM01374	Ribosomal_L14_2	coord: 19..140 e-value: 3.2E-60 score: 216.1
IPR000218	Ribosomal protein L14P	PFAM	PF00238	Ribosomal_L14	coord: 22..140 e-value: 6.5E-36 score: 123.0
IPR000218	Ribosomal protein L14P	PANTHER	PTHR11761	50S/60S RIBOSOMAL PROTEIN L14/L23	coord: 1..140
IPR000218	Ribosomal protein L14P	HAMAP	MF_01367	Ribosomal_L14	coord: 19..140 score: 19.384665
IPR036853	Ribosomal protein L14 superfamily	GENE3D	2.40.150.20	Ribosomal protein L14	coord: 1..140 e-value: 5.9E-56 score: 190.0
IPR036853	Ribosomal protein L14 superfamily	SUPERFAMILY	50193	Ribosomal protein L14	coord: 11..140
None	No IPR available	PANTHER	PTHR11761:SF19	60S RIBOSOMAL PROTEIN L23	coord: 1..140
IPR019972	Ribosomal protein L14P, conserved site	PROSITE	PS00049	RIBOSOMAL_L14	coord: 79..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g257960.m01	Csor.00g257960.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome