Csor.00g257580 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g257580
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
Location	Csor_Chr17: 512042 .. 513202 (+)
RNA-Seq Expression	Csor.00g257580
Synteny	Csor.00g257580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCCGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCCAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCATGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCATCGCCCAGACTGACCCCAGTCCGTCTCCTTTTTTTTTTATTTATTAAATTTATAAATATTTACAAATTTTTTAGAAATAAATAAATAAATACATTATCGATAAATGTTTATTATTATTAATCTTGACATTGGTGTTCTATGCAGGTTATGGATCTTGTGTTTATCCATCTTCAATCAGGTACGCTAATTTTTTATTTTTATTTTTTTTTTCTATTTTAAAAATAAAATATTTTAATTTTCCAATTTATTAAAATGTGCGTAGAAAAACCCTTTATCATATATATATATATATATATATATATATATATATATATATATATAGGTATTTTGGTGGAGATTTCTTCATGTTCAAGTAAATGGGTTCACTTTTTAGAGTGTTATATTAATAATTAATTCTGAAAATCATATTTATTTGGCTTTTTTTTTTCTCCACTAATTTATTAATTTAAGATTCTTTTAAAAAATGTAATAAAATTTTCCGCCATTATTTTTAAAATTCTCGATTCTTTTAATTACCACTTTAAAATAAAGATTCTCGATATATATATATTTTTTTCTAGCCAAGAAAATAGACATTTCTCTTTATTCTATCTTTTTGGTACAATTTTTTTTTTTACAGTGTTGAAAATAAAAAATAACTTTTTTTTGCTAAAATAAATTATTTTCATTTTAAATTTAGGGGGAAAAGGGAATGTAGTAACTTCTTCTACATCTTTCTGTGGGGTTCATCTAGGTTAGACACCGTTGGATCAGTCTGGCTGGGGCCCAGGGAGTGGTCAGATCCAACGGTGAGGATGGCATGGATTTACTTTCAAATTGTAAATCAGCTTTTTCCTGAAACGGTGCGTTTTGGGGAGTCTTGA

mRNA sequence

ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCCGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCCAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCATGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCATCGCCCAGACTGACCCCAGTTATGGATCTTGTGTTTATCCATCTTCAATCAGGTTAGACACCGTTGGATCAGTCTGGCTGGGGCCCAGGGAGTGGTCAGATCCAACGGTGAGGATGGCATGGATTTACTTTCAAATTGTAAATCAGCTTTTTCCTGAAACGGTGCGTTTTGGGGAGTCTTGA

Coding sequence (CDS)

ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCCGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCCAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCATGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCATCGCCCAGACTGACCCCAGTTATGGATCTTGTGTTTATCCATCTTCAATCAGGTTAGACACCGTTGGATCAGTCTGGCTGGGGCCCAGGGAGTGGTCAGATCCAACGGTGAGGATGGCATGGATTTACTTTCAAATTGTAAATCAGCTTTTTCCTGAAACGGTGCGTTTTGGGGAGTCTTGA

Protein sequence

MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTVRMAWIYFQIVNQLFPETVRFGES

Homology

[Close]

BLAST of Csor.00g257580 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.0e-23
Identity = 50/105 (47.62%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           + +L++ LL  +      WCV +   S   LQ  LDYAC  GADC P+   G CF PNT+
Sbjct: 3   VFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTV 62

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSS 116
           ++H SYA NSFFQ+K  + G+CDFAG+AT + +DPSY +C +P+S
Sbjct: 63  KSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPAS 107

[Close]

BLAST of Csor.00g257580 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-22
Identity = 51/104 (49.04%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L  L  +    A WCV ++  S   LQ  LDYAC  GADC P    G CF P+ ++
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSS 116
           AH +YA NSFFQ+K  A  SC+F G+AT+  TDPSY  C +PSS
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSS 107

[Close]

BLAST of Csor.00g257580 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.4e-22
Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L LL  +    A WCV ++  S   LQ  LDYAC  GADC P      CF P+ ++
Sbjct: 4   LVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSS 116
           +H +YA NSFFQ+K  +PGSC+F G+AT   +DPSY  C +P+S
Sbjct: 64  SHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTS 107

[Close]

BLAST of Csor.00g257580 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-19
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 20  PTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFN 79
           P+  V  + WCV +  A+ E LQ +LD+AC  G DC  +   G CF PN + +HA+YA N
Sbjct: 355 PSGKVTSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMN 414

Query: 80  SFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYP 114
            +FQ+    P  CDF+ +AT+   +PSY +CVYP
Sbjct: 415 MYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYP 448

[Close]

BLAST of Csor.00g257580 vs. ExPASy Swiss-Prot
Match: Q84V39 (Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.5e-19
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 29  WCVARSEASYEALQTALDYACA-TGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAM 88
           WCV ++EA+   LQ+ +DY C+ +G DC P+ +NG CF PNT++AHASYA NS++Q K  
Sbjct: 37  WCVPKAEATDAQLQSNIDYVCSQSGMDCGPIQANGACFNPNTVRAHASYAMNSWYQSKGR 96

Query: 89  APGSCDFAGSATIAQTDPSYGSCVYPS 115
               CDF+G+  I  +DPS GSC + S
Sbjct: 97  NDFDCDFSGTGAITSSDPSNGSCSFLS 123

[Close]

BLAST of Csor.00g257580 vs. NCBI nr
Match: KAG6574856.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323 bits (829), Expect = 1.27e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDT 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDT
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDT 120

Query: 121 VGSVWLGPREWSDPTVRMAWIYFQIVNQLFPETVRFGES 159
           VGSVWLGPREWSDPTVRMAWIYFQIVNQLFPETVRFGES
Sbjct: 121 VGSVWLGPREWSDPTVRMAWIYFQIVNQLFPETVRFGES 159

[Close]

BLAST of Csor.00g257580 vs. NCBI nr
Match: XP_022959424.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >XP_023548894.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232 bits (592), Expect = 6.21e-75
Identity = 120/135 (88.89%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDT 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSI    
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSISA-A 120

Query: 121 VGSVWLGPREWSDPT 135
            G++   P   + PT
Sbjct: 121 GGAITPSPPANTSPT 134

[Close]

BLAST of Csor.00g257580 vs. NCBI nr
Match: XP_023006227.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita maxima])

HSP 1 Score: 232 bits (591), Expect = 8.81e-75
Identity = 119/135 (88.15%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDT 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQTDPSYGSCVYPSSI    
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISA-A 120

Query: 121 VGSVWLGPREWSDPT 135
            G++   P   + PT
Sbjct: 121 GGAITPSPPANTSPT 134

[Close]

BLAST of Csor.00g257580 vs. NCBI nr
Match: XP_038875835.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Benincasa hispida])

HSP 1 Score: 206 bits (523), Expect = 3.43e-64
Identity = 106/136 (77.94%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLV SHSFLL    FL+ TSAVDGAYWCVARS+ASYEALQ ALDYACATGADC P+L 
Sbjct: 23  MATLVFSHSFLLFF--FLIGTSAVDGAYWCVARSDASYEALQAALDYACATGADCNPILL 82

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDT 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ+DPSYGSCVYPSS     
Sbjct: 83  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSTSA-A 142

Query: 121 VGSVWLGPREWSDPTV 136
            G++   P   + PT+
Sbjct: 143 GGAITPSPPTNTSPTI 155

[Close]

BLAST of Csor.00g257580 vs. NCBI nr
Match: XP_004138961.2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus])

HSP 1 Score: 197 bits (502), Expect = 3.18e-61
Identity = 99/137 (72.26%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 1   MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLL 60
           MAT +LSH SF      FL  TS VDGAYWCVARS+A+YE+LQ ALDYACATGA+CTP++
Sbjct: 1   MATFLLSHYSFFFFFFFFLFGTSTVDGAYWCVARSDATYESLQAALDYACATGAECTPIM 60

Query: 61  SNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLD 120
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ+DPSYGSCVYPSS+   
Sbjct: 61  LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSLS-S 120

Query: 121 TVGSVWLGPREWSDPTV 136
             G++   P   + PT+
Sbjct: 121 AGGAITPSPPANASPTI 136

[Close]

BLAST of Csor.00g257580 vs. ExPASy TrEMBL
Match: A0A6J1H812 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111460407 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 3.00e-75
Identity = 120/135 (88.89%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDT 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSI    
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSISA-A 120

Query: 121 VGSVWLGPREWSDPT 135
            G++   P   + PT
Sbjct: 121 GGAITPSPPANTSPT 134

[Close]

BLAST of Csor.00g257580 vs. ExPASy TrEMBL
Match: A0A6J1KVB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucurbita maxima OX=3661 GN=LOC111499021 PE=4 SV=1)

HSP 1 Score: 232 bits (591), Expect = 4.27e-75
Identity = 119/135 (88.15%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS
Sbjct: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLDT 120
           NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQTDPSYGSCVYPSSI    
Sbjct: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISA-A 120

Query: 121 VGSVWLGPREWSDPT 135
            G++   P   + PT
Sbjct: 121 GGAITPSPPANTSPT 134

[Close]

BLAST of Csor.00g257580 vs. ExPASy TrEMBL
Match: A0A0A0LND4 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G139290 PE=4 SV=1)

HSP 1 Score: 197 bits (502), Expect = 1.54e-61
Identity = 99/137 (72.26%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 1   MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLL 60
           MAT +LSH SF      FL  TS VDGAYWCVARS+A+YE+LQ ALDYACATGA+CTP++
Sbjct: 1   MATFLLSHYSFFFFFFFFLFGTSTVDGAYWCVARSDATYESLQAALDYACATGAECTPIM 60

Query: 61  SNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIRLD 120
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ+DPSYGSCVYPSS+   
Sbjct: 61  LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSLS-S 120

Query: 121 TVGSVWLGPREWSDPTV 136
             G++   P   + PT+
Sbjct: 121 AGGAITPSPPANASPTI 136

[Close]

BLAST of Csor.00g257580 vs. ExPASy TrEMBL
Match: A0A1S3C4M3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103496965 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 2.33e-61
Identity = 100/139 (71.94%), Postives = 113/139 (81.29%), Query Frame = 0


Query: 1   MATLVLSHS---FLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTP 60
           MAT + SH    FL   L FL+ TSAVDGAYWCVARS+A+YE+LQ A+DYACATGADCTP
Sbjct: 1   MATFLPSHYYSFFLFFFLFFLIGTSAVDGAYWCVARSDATYESLQAAIDYACATGADCTP 60

Query: 61  LLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIR 120
           +L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDF GSATIAQ+DPSYGSCVYPSS+ 
Sbjct: 61  ILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFGGSATIAQSDPSYGSCVYPSSLS 120

Query: 121 LDTVGSVWLGPREWSDPTV 136
               G++   P   + PT+
Sbjct: 121 -SAGGAITPSPPANTSPTI 138

[Close]

BLAST of Csor.00g257580 vs. ExPASy TrEMBL
Match: A0A6J1KGS7 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494211 PE=4 SV=1)

HSP 1 Score: 191 bits (486), Expect = 9.51e-60
Identity = 96/117 (82.05%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MATL LSHSFLLLL+     TSAV   +WCVARS+ SYEALQTAL+YACATGADCTP+L 
Sbjct: 28  MATLFLSHSFLLLLI-GTTTTSAVSSEFWCVARSDVSYEALQTALNYACATGADCTPILP 87

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIR 117
           NG+CFLPNTIQAHASYAFNSFFQRKAMAPGSC+FAGSATIA ++PSYGSCVYPSSIR
Sbjct: 88  NGMCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPSSIR 143

[Close]

BLAST of Csor.00g257580 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 3.3e-38
Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MA  + + SFLLLLL           A WCVAR + + +ALQ ALDYACA GADC P+  
Sbjct: 39  MALCLQTLSFLLLLLF------RSSAAMWCVARFDVTSQALQAALDYACAAGADCAPIQP 98

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSSIR 118
           NGLCFLPNT+QAHASYAFNS+FQR AMAPGSC+FAG++TIA+TDPSYGSCVYP+S+R
Sbjct: 99  NGLCFLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYPNSVR 149

[Close]

BLAST of Csor.00g257580 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 109.0 bits (271), Expect = 3.6e-24
Identity = 50/105 (47.62%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           + +L++ LL  +      WCV +   S   LQ  LDYAC  GADC P+   G CF PNT+
Sbjct: 3   VFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTV 62

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSS 116
           ++H SYA NSFFQ+K  + G+CDFAG+AT + +DPSY +C +P+S
Sbjct: 63  KSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPAS 107

[Close]

BLAST of Csor.00g257580 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 )

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23
Identity = 51/104 (49.04%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L  L  +    A WCV ++  S   LQ  LDYAC  GADC P    G CF P+ ++
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSS 116
           AH +YA NSFFQ+K  A  SC+F G+AT+  TDPSY  C +PSS
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSS 107

[Close]

BLAST of Csor.00g257580 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 )

HSP 1 Score: 104.8 bits (260), Expect = 6.7e-23
Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L LL  +    A WCV ++  S   LQ  LDYAC  GADC P      CF P+ ++
Sbjct: 4   LVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPSS 116
           +H +YA NSFFQ+K  +PGSC+F G+AT   +DPSY  C +P+S
Sbjct: 64  SHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTS 107

[Close]

BLAST of Csor.00g257580 vs. TAIR 10
Match: AT2G05790.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 99.0 bits (245), Expect = 3.7e-21
Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 21  TSAVDGAYWCVARSEASYEALQTALDYACAT-GADCTPLLSNGLCFLPNTIQAHASYAFN 80
           + +++G  WCVA  +A  E LQ  LDYAC   GADC P+     C+ P+T++AHAS+AFN
Sbjct: 376 SKSLNGYTWCVANGDAGEERLQGGLDYACGEGGADCRPIQPGANCYSPDTLEAHASFAFN 435

Query: 81  SFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPS 115
           S++Q+K  A GSC F G+A +    P YG C +P+
Sbjct: 436 SYYQKKGRAGGSCYFGGAAYVVSQPPKYGRCEFPT 470

The following BLAST results are available for this feature:

BLAST of Csor.00g257580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ86	5.0e-23	47.62	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3...	[more]
Q9SD84	4.2e-22	49.04	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2...	[more]
Q9FNQ2	9.4e-22	47.12	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]
Q9M069	2.0e-19	43.62	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 ...	[more]
Q84V39	7.5e-19	49.43	Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1	[more]

BLAST of Csor.00g257580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574856.1	1.27e-111	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022959424.1	6.21e-75	88.89	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >XP_023548894....	[more]
XP_023006227.1	8.81e-75	88.15	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita maxima]	[more]
XP_038875835.1	3.43e-64	77.94	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Benincasa hispida]	[more]
XP_004138961.2	3.18e-61	72.26	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]	[more]

BLAST of Csor.00g257580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H812	3.00e-75	88.89	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KVB1	4.27e-75	88.15	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]
A0A0A0LND4	1.54e-61	72.26	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G139290 PE=4 SV=...	[more]
A0A1S3C4M3	2.33e-61	71.94	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103496965 ...	[more]
A0A6J1KGS7	9.51e-60	82.05	PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like isoform X2 OS=Cucurbita maxima OX=3...	[more]

BLAST of Csor.00g257580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13600.1	3.3e-38	66.67	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G18650.1	3.6e-24	47.62	plasmodesmata callose-binding protein 3	[more]
AT5G08000.1	3.0e-23	49.04	glucan endo-1,3-beta-glucosidase-like protein 3	[more]
AT5G61130.1	6.7e-23	47.12	plasmodesmata callose-binding protein 1	[more]
AT2G05790.1	3.7e-21	46.32	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 28..112 e-value: 1.4E-42 score: 157.5
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 29..99 e-value: 1.2E-19 score: 70.7
None	No IPR available	GENE3D	1.20.58.1040		coord: 22..119 e-value: 3.1E-10 score: 42.3
None	No IPR available	PANTHER	PTHR31044:SF47	CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN	coord: 11..117
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 11..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g257580.m01	Csor.00g257580.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma