Csor.00g257160 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g257160
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Cyclin
Location	Csor_Chr17: 266722 .. 268132 (+)
RNA-Seq Expression	Csor.00g257160
Synteny	Csor.00g257160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAAGAAGAAAGCTCCTCCATGATGCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAGTCGAACGACGATCTCGTGGACGATGACTCGGCCATCGAAACGCAGAAGAACTCGGCGTTCCATGGCTTGACTCGCCCATCTATCTCTCTTCATACCTACCTTGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATGTTTATCTTGACCGCTTTGCTCAAAGGCAGCCATTGTTGCCTATCAACTCCTTTAATGTTCATCGTTTGCTCATTACAAGTGTTCTTGTTGCTGCCAAGTTCATGGATGATCTGTAAGTTTAATTTTCTTCTCTCTTTTCCCCCCTTTTTTGTAATATACAGTAATAATTGAGTTTTAGGACCTCCATTCGTTGTGTTACGAGTATCTATATGCATCTCGACTAATTTCATAAGATTCGTGCATGAACCTATAATATTTAAGAACCTCTAAAACTCCGTGATAATTGAATCTAAATCTTTAGAGGGTATACCAAAATGTGAGATTATACTTTGGTTGGAGAGAGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCATAGTAGACGCATTGAAAATCATGAAGCTAACGACAATACATAATGGGTAAAAGCGAATAATATCTGCCACCCACTAGGCAGTGTGCCAACAAGAACGTTGGGTCCCCAAGAAGGGGGTAGATTGTGAGATTCCACGTTGATTAGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAATGCGTTTGAAAACCATGCGGTTGATGACGATACGTAACGAGCCAAAGCGGACAATATATGCTAGCAGTAGACTTGAACTATTACAAATGGTATTAGAGCCAGTCACCAGGCAGTGTGCCAACAAGGACGTTGGGTTCTCAAGAGGGGTGAATGGTAAGATTCCACATTAGTTGAAGAGGGAAACGAAACATTTCTTATAAGAGCATGAAAACCTCTCCCTAGTAGACACATTTTAAAACCGTGAGGCTGATTACGATACGTAACGGACTAAAACGGACATTATAATTTGAAAAGTTGGTTTTTGTTTTCAGGTGTTACAACAATGGTTTCTATGCAAGAGTTGGAGGGATCAGCACAAGAGAAATAAACTTTCTTGAAGTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACATTCCACACCTATTGCTCTTGTTTACACAAAGAGATGCTTCAACTAAAACCTCCTCTTAGTAACTCTCTATTAACTTCTTCAGAAACATCACTAAATAAAGCTTCCCATTTGAGCTTTGAAGAAGATGAAGCTTCTCATCATCAAAACCAACACCAACTAGCTGCTTAA

mRNA sequence

ATGGTGGAAGAAGAAAGCTCCTCCATGATGCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAGTCGAACGACGATCTCGTGGACGATGACTCGGCCATCGAAACGCAGAAGAACTCGGCGTTCCATGGCTTGACTCGCCCATCTATCTCTCTTCATACCTACCTTGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATGTTTATCTTGACCGCTTTGCTCAAAGGCAGCCATTGTTGCCTATCAACTCCTTTAATGTTCATCGTTTGCTCATTACAAGTGTTCTTGTTGCTGCCAAGTTCATGGATGATCTGTGTTACAACAATGGTTTCTATGCAAGAGTTGGAGGGATCAGCACAAGAGAAATAAACTTTCTTGAAGTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACATTCCACACCTATTGCTCTTGTTTACACAAAGAGATGCTTCAACTAAAACCTCCTCTTAGTAACTCTCTATTAACTTCTTCAGAAACATCACTAAATAAAGCTTCCCATTTGAGCTTTGAAGAAGATGAAGCTTCTCATCATCAAAACCAACACCAACTAGCTGCTTAA

Coding sequence (CDS)

ATGGTGGAAGAAGAAAGCTCCTCCATGATGCCAAAGCTCATCACTTTCCTCTCTTCTGTGCTTCAAAGAGTGGCCGAGTCGAACGACGATCTCGTGGACGATGACTCGGCCATCGAAACGCAGAAGAACTCGGCGTTCCATGGCTTGACTCGCCCATCTATCTCTCTTCATACCTACCTTGAAAGGATCTTCAAGTATGCCAATTGTAGCAACTCTTGCTTCATTGTTGCTTATGTTTATCTTGACCGCTTTGCTCAAAGGCAGCCATTGTTGCCTATCAACTCCTTTAATGTTCATCGTTTGCTCATTACAAGTGTTCTTGTTGCTGCCAAGTTCATGGATGATCTGTGTTACAACAATGGTTTCTATGCAAGAGTTGGAGGGATCAGCACAAGAGAAATAAACTTTCTTGAAGTGGATTTCCTCTTTGGATTAGGGTTTCACTTGAATGTGACACCCAACACATTCCACACCTATTGCTCTTGTTTACACAAAGAGATGCTTCAACTAAAACCTCCTCTTAGTAACTCTCTATTAACTTCTTCAGAAACATCACTAAATAAAGCTTCCCATTTGAGCTTTGAAGAAGATGAAGCTTCTCATCATCAAAACCAACACCAACTAGCTGCTTAA

Protein sequence

MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYLERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNGFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLTSSETSLNKASHLSFEEDEASHHQNQHQLAA

Homology

[Close]

BLAST of Csor.00g257160 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.4e-65
Identity = 135/210 (64.29%), Postives = 164/210 (78.10%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           M E E+ S+M KLI FLSS+L+RVAESND  +    A ++Q+ S FHGL+RP+I++ +YL
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESND--LTRRVATQSQRVSVFHGLSRPTITIQSYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERIFKYANCS SCF+VAYVYLDRF  RQP LPINSFNVHRLLITSV+VAAKF+DDL YNN
Sbjct: 61  ERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180
            +YA+VGGIST+E+NFLE+DFLFGLGF LNVTPNTF+ Y S L KEM  L+ PLS  ++ 
Sbjct: 121 AYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQ-PLSLVVVP 180

Query: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 211
           SS       S ++F +DEASH + Q Q  A
Sbjct: 181 SSR------SLITFNDDEASHQKQQQQQLA 201

[Close]

BLAST of Csor.00g257160 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.3e-58
Identity = 121/214 (56.54%), Postives = 156/214 (72.90%), Query Frame = 0


Query: 2   VEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYLE 61
           ++E  + +MP ++T +S +LQRV+E+ND+L       + QK S+F G+T+PSIS+ +YLE
Sbjct: 14  LQEPLAEIMPSVLTAMSYLLQRVSETNDNL------SQKQKPSSFTGVTKPSISIRSYLE 73

Query: 62  RIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNG 121
           RIF+YANCS SC+IVAY+YLDRF ++QP LPINSFNVHRL+ITSVLV+AKFMDDL YNN 
Sbjct: 74  RIFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNE 133

Query: 122 FYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLS-----N 181
           +YA+VGGIS  E+N LE+DFLFG+GF LNVT +TF+ YC  L +EM  L    S     +
Sbjct: 134 YYAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMKSLFLEPS 193

Query: 182 SLLTSSETSLNKASHLSFEEDEASHHQNQHQLAA 211
           S   SS+T L    H   EED  S H N+ QLAA
Sbjct: 194 SFKISSKTKLVMYPH---EEDSLSTHHNKKQLAA 218

[Close]

BLAST of Csor.00g257160 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.1e-57
Identity = 106/166 (63.86%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 3   EEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYLER 62
           +E  + +MP +IT +SS+LQRV+E+NDDL       E ++ SAF+ +T+PSIS+ +Y+ER
Sbjct: 13  QEPMAEIMPNVITAMSSLLQRVSETNDDL--SRPFREHKRISAFNAVTKPSISIRSYMER 72

Query: 63  IFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNGF 122
           IFKYA+CS+SC+IVAY+YLDRF Q+QPLLPI+S NVHRL+ITSVLV+AKFMDDLCYNN F
Sbjct: 73  IFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAF 132

Query: 123 YARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEML 169
           YA+VGGI+T E+N LE+DFLFG+GF LNVT +T++ YCS L +EM+
Sbjct: 133 YAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMV 176

[Close]

BLAST of Csor.00g257160 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.8e-51
Identity = 108/208 (51.92%), Postives = 143/208 (68.75%), Query Frame = 0


Query: 5   ESSSMMPKLITFLSSVLQRVAESNDDLVDDDS-AIETQKNSAFHGLTRPSISLHTYLERI 64
           E +  +P+++  LSS+LQRVAE ND      +   E    SAF GLT+P+IS+  YLERI
Sbjct: 5   EVAEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERI 64

Query: 65  FKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNGFY 124
           F++ANCS SC++VAY+YLDRF +R+P L ++SFNVHRLLITSVL A KF+DD+CYNN ++
Sbjct: 65  FRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYF 124

Query: 125 ARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSL--LTS 184
           ARVGGIS  E+N+LEVDFLFG+ F LNVTP  F +YC+ L  EM  L+ P +  L  L  
Sbjct: 125 ARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPPAVDLPRLHC 184

Query: 185 SETSLNKASHLSFEEDEASHHQNQHQLA 210
             +  + A     ++ +    Q QHQLA
Sbjct: 185 CPSDQDDAG-CHHKQQQQQQQQQQHQLA 211

[Close]

BLAST of Csor.00g257160 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-37
Identity = 80/167 (47.90%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 4   EESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYLERI 63
           +++++  PK++  L++ L R  + N+DL+D +   ++  ++ FHG   P +S+  Y ERI
Sbjct: 29  KKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDS--STIFHGHRAPDLSIKLYAERI 88

Query: 64  FKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNGFY 123
           FKY+ CS SCF++A +Y++R+ Q QP + + S +VHRLLITSV+VAAKF DD  +NN FY
Sbjct: 89  FKYSECSPSCFVLALIYMERYLQ-QPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFY 148

Query: 124 ARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQL 171
           ARVGGIST E+N LE+D LF L F L V   TF +YC  L KE + L
Sbjct: 149 ARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMVL 192

[Close]

BLAST of Csor.00g257160 vs. NCBI nr
Match: KAG6574814.1 (Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416 bits (1069), Expect = 1.56e-146
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180
           GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180

Query: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 210
           SSETSLNKASHLSFEEDEASHHQNQHQLAA
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 210

[Close]

BLAST of Csor.00g257160 vs. NCBI nr
Match: XP_022958930.1 (cyclin-U4-1-like [Cucurbita moschata])

HSP 1 Score: 415 bits (1066), Expect = 4.47e-146
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180
           GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180

Query: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 210
           SSETSLNKASHLSFEEDEASHHQNQHQ+AA
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQVAA 210

[Close]

BLAST of Csor.00g257160 vs. NCBI nr
Match: XP_023548896.1 (cyclin-U4-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411 bits (1056), Expect = 1.50e-144
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180
           GFYARVGGIST+EINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEML LKPPLSNSLLT
Sbjct: 121 GFYARVGGISTKEINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSLLT 180

Query: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 210
           SSETSLNKASHLSFEEDEASHHQNQHQ+AA
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQVAA 210

[Close]

BLAST of Csor.00g257160 vs. NCBI nr
Match: XP_023006685.1 (cyclin-U4-1-like [Cucurbita maxima])

HSP 1 Score: 409 bits (1050), Expect = 1.23e-143
Identity = 206/210 (98.10%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           MVEEESSSMMPKLITFLSSVLQRVAESND+LVDDDSAIETQKNSAFHGLTRPSISLHTYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDNLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERIFKY NCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN
Sbjct: 61  ERIFKYVNCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180
           GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEML LKPPLSNSLLT
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSLLT 180

Query: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 210
           SSETSLNKASHLSFEEDEASHHQNQHQ+AA
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQVAA 210

[Close]

BLAST of Csor.00g257160 vs. NCBI nr
Match: XP_022155727.1 (cyclin-U4-1-like [Momordica charantia])

HSP 1 Score: 327 bits (839), Expect = 1.53e-111
Identity = 173/207 (83.57%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           MVE ES+SMMPKLITFLSSVLQRVAESND L   DSAIETQK+SAFHGLTRP ISLH+YL
Sbjct: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHL---DSAIETQKSSAFHGLTRPGISLHSYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERI KYANCSNSCFIVAYVYLDRFAQRQPLLPINS+NVHRLLITSVLVAAKFMDD CYNN
Sbjct: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSL-- 180
            FYARVGGIST EINFLEVDFLFGLGFHLNVTPNTFHTYCS L KEML  +PPL++ +  
Sbjct: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180

Query: 181 LTSSETSLNKASHLSFEEDEASHHQNQ 205
           +TSSE SL K  +LSFEEDE+SH Q Q
Sbjct: 181 ITSSEISL-KTKYLSFEEDESSHQQQQ 203

[Close]

BLAST of Csor.00g257160 vs. ExPASy TrEMBL
Match: A0A6J1H4V3 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111460076 PE=3 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 2.16e-146
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN
Sbjct: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180
           GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180

Query: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 210
           SSETSLNKASHLSFEEDEASHHQNQHQ+AA
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQVAA 210

[Close]

BLAST of Csor.00g257160 vs. ExPASy TrEMBL
Match: A0A6J1L0U3 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499346 PE=3 SV=1)

HSP 1 Score: 409 bits (1050), Expect = 5.95e-144
Identity = 206/210 (98.10%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           MVEEESSSMMPKLITFLSSVLQRVAESND+LVDDDSAIETQKNSAFHGLTRPSISLHTYL
Sbjct: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDNLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERIFKY NCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN
Sbjct: 61  ERIFKYVNCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180
           GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEML LKPPLSNSLLT
Sbjct: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLLLKPPLSNSLLT 180

Query: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 210
           SSETSLNKASHLSFEEDEASHHQNQHQ+AA
Sbjct: 181 SSETSLNKASHLSFEEDEASHHQNQHQVAA 210

[Close]

BLAST of Csor.00g257160 vs. ExPASy TrEMBL
Match: A0A6J1DQ51 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111022783 PE=3 SV=1)

HSP 1 Score: 327 bits (839), Expect = 7.42e-112
Identity = 173/207 (83.57%), Postives = 184/207 (88.89%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           MVE ES+SMMPKLITFLSSVLQRVAESND L   DSAIETQK+SAFHGLTRP ISLH+YL
Sbjct: 1   MVEGESTSMMPKLITFLSSVLQRVAESNDHL---DSAIETQKSSAFHGLTRPGISLHSYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERI KYANCSNSCFIVAYVYLDRFAQRQPLLPINS+NVHRLLITSVLVAAKFMDD CYNN
Sbjct: 61  ERILKYANCSNSCFIVAYVYLDRFAQRQPLLPINSYNVHRLLITSVLVAAKFMDDRCYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSL-- 180
            FYARVGGIST EINFLEVDFLFGLGFHLNVTPNTFHTYCS L KEML  +PPL++ +  
Sbjct: 121 AFYARVGGISTTEINFLEVDFLFGLGFHLNVTPNTFHTYCSSLQKEMLLQQPPLTSPITS 180

Query: 181 LTSSETSLNKASHLSFEEDEASHHQNQ 205
           +TSSE SL K  +LSFEEDE+SH Q Q
Sbjct: 181 ITSSEISL-KTKYLSFEEDESSHQQQQ 203

[Close]

BLAST of Csor.00g257160 vs. ExPASy TrEMBL
Match: A0A1S4E2M4 (cyclin-U4-1-like OS=Cucumis melo OX=3656 GN=LOC103498997 PE=3 SV=1)

HSP 1 Score: 312 bits (800), Expect = 7.09e-104
Identity = 168/216 (77.78%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 3   EEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYLER 62
           EE +S  MPKLITFLSSVLQRVAESNDDL D+D A ETQKNSAFHGLTRPSISL +YLER
Sbjct: 124 EESTSCSMPKLITFLSSVLQRVAESNDDLDDNDLATETQKNSAFHGLTRPSISLQSYLER 183

Query: 63  IFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNGF 122
           IFKYANCSNSCFIVAYVYLDRFAQ+QPLLPINS+NVHRLLITSVLVAAKFMDDLCYNN F
Sbjct: 184 IFKYANCSNSCFIVAYVYLDRFAQKQPLLPINSYNVHRLLITSVLVAAKFMDDLCYNNAF 243

Query: 123 YARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSN-SLLTS 182
           YARVGGISTREINFLEVDFLFGLGF LNVTP TFHTY SCL  E+  L PP SN S+LT 
Sbjct: 244 YARVGGISTREINFLEVDFLFGLGFELNVTPTTFHTYSSCLQNEIFLLHPPFSNISMLTP 303

Query: 183 -------SETSLN-KASHLSFEEDEA--SHHQNQHQ 207
                  S+TSLN KA  ++F++D    SHHQ   Q
Sbjct: 304 PPPPPPPSQTSLNNKALFITFQQDHQPNSHHQKNQQ 339

[Close]

BLAST of Csor.00g257160 vs. ExPASy TrEMBL
Match: A0A0A0KER4 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G078670 PE=3 SV=1)

HSP 1 Score: 307 bits (787), Expect = 1.23e-103
Identity = 167/219 (76.26%), Postives = 182/219 (83.11%), Query Frame = 0


Query: 1   MVEEESSSM-MPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTY 60
           MVE+ES+S  MPKLITFLSSVLQRVAESNDDL ++DSA ETQKNSAFHGLTRPSISL +Y
Sbjct: 1   MVEQESTSCSMPKLITFLSSVLQRVAESNDDLDNNDSATETQKNSAFHGLTRPSISLQSY 60

Query: 61  LERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYN 120
           LERIFKYANCSNSCFIVAYVYLDRFAQ+QPLLPINS+NVHRLLITSVLVAAKFMDDLCYN
Sbjct: 61  LERIFKYANCSNSCFIVAYVYLDRFAQKQPLLPINSYNVHRLLITSVLVAAKFMDDLCYN 120

Query: 121 NGFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSN-SL 180
           N FYARVGGISTREINFLEVDFLFGLGF LNVTP TFHTY SCL  E+  L PP +N S+
Sbjct: 121 NAFYARVGGISTREINFLEVDFLFGLGFELNVTPTTFHTYSSCLQNEIFLLNPPFTNISI 180

Query: 181 LTSS--------ETSLN-KASHLSFEED-EASHHQNQHQ 207
           L           +TSLN K   ++F+ D + SHHQ   Q
Sbjct: 181 LAPPLPPPPPPPQTSLNNKTLFITFQPDHQPSHHQKNQQ 219

[Close]

BLAST of Csor.00g257160 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 250.0 bits (637), Expect = 1.7e-66
Identity = 135/210 (64.29%), Postives = 164/210 (78.10%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           M E E+ S+M KLI FLSS+L+RVAESND  +    A ++Q+ S FHGL+RP+I++ +YL
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESND--LTRRVATQSQRVSVFHGLSRPTITIQSYL 60

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           ERIFKYANCS SCF+VAYVYLDRF  RQP LPINSFNVHRLLITSV+VAAKF+DDL YNN
Sbjct: 61  ERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNN 120

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSNSLLT 180
            +YA+VGGIST+E+NFLE+DFLFGLGF LNVTPNTF+ Y S L KEM  L+ PLS  ++ 
Sbjct: 121 AYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQ-PLSLVVVP 180

Query: 181 SSETSLNKASHLSFEEDEASHHQNQHQLAA 211
           SS       S ++F +DEASH + Q Q  A
Sbjct: 181 SSR------SLITFNDDEASHQKQQQQQLA 201

[Close]

BLAST of Csor.00g257160 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 225.3 bits (573), Expect = 4.5e-59
Identity = 121/214 (56.54%), Postives = 156/214 (72.90%), Query Frame = 0


Query: 2   VEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYLE 61
           ++E  + +MP ++T +S +LQRV+E+ND+L       + QK S+F G+T+PSIS+ +YLE
Sbjct: 14  LQEPLAEIMPSVLTAMSYLLQRVSETNDNL------SQKQKPSSFTGVTKPSISIRSYLE 73

Query: 62  RIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNG 121
           RIF+YANCS SC+IVAY+YLDRF ++QP LPINSFNVHRL+ITSVLV+AKFMDDL YNN 
Sbjct: 74  RIFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNE 133

Query: 122 FYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLS-----N 181
           +YA+VGGIS  E+N LE+DFLFG+GF LNVT +TF+ YC  L +EM  L    S     +
Sbjct: 134 YYAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMKSLFLEPS 193

Query: 182 SLLTSSETSLNKASHLSFEEDEASHHQNQHQLAA 211
           S   SS+T L    H   EED  S H N+ QLAA
Sbjct: 194 SFKISSKTKLVMYPH---EEDSLSTHHNKKQLAA 218

[Close]

BLAST of Csor.00g257160 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 222.6 bits (566), Expect = 2.9e-58
Identity = 106/166 (63.86%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 3   EEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYLER 62
           +E  + +MP +IT +SS+LQRV+E+NDDL       E ++ SAF+ +T+PSIS+ +Y+ER
Sbjct: 13  QEPMAEIMPNVITAMSSLLQRVSETNDDL--SRPFREHKRISAFNAVTKPSISIRSYMER 72

Query: 63  IFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNGF 122
           IFKYA+CS+SC+IVAY+YLDRF Q+QPLLPI+S NVHRL+ITSVLV+AKFMDDLCYNN F
Sbjct: 73  IFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAF 132

Query: 123 YARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEML 169
           YA+VGGI+T E+N LE+DFLFG+GF LNVT +T++ YCS L +EM+
Sbjct: 133 YAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMV 176

[Close]

BLAST of Csor.00g257160 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 152.1 bits (383), Expect = 4.8e-37
Identity = 82/192 (42.71%), Postives = 121/192 (63.02%), Query Frame = 0


Query: 3   EEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYLER 62
           E  + +  P+++T +S V++++   N+ L         +   AFHG+  PSIS+  YLER
Sbjct: 17  ESATEAATPRVLTIISHVMEKLVARNEWLAKQTKGF-GKSLEAFHGVRAPSISIAKYLER 76

Query: 63  IFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNNGF 122
           I+KY  CS +CF+V YVY+DR A + P   + S NVHRLL+T V++AAK +DD+ YNN F
Sbjct: 77  IYKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEF 136

Query: 123 YARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEMLQLKPPLSN-SLLTS 182
           YARVGG+S  ++N +E++ LF L F + V+   F +YC  L KEM QL   +S+   +  
Sbjct: 137 YARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM-QLNDAVSSLKDIQP 196

Query: 183 SETSLNKASHLS 194
            + SL+ AS LS
Sbjct: 197 MQESLSPASTLS 206

[Close]

BLAST of Csor.00g257160 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 139.4 bits (350), Expect = 3.2e-33
Identity = 77/187 (41.18%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 1   MVEEESSSMMPKLITFLSSVLQRVAESNDDLVDDDSAIETQKNSAFHGLTRPSISLHTYL 60
           ++E +     P +++ LSS L+R    N D  D          + F G + P IS+  YL
Sbjct: 22  IIEGKRLKKPPTVLSRLSSSLERSLLLNHD--DKILLGSPDSVTVFDGRSPPEISIAHYL 81

Query: 61  ERIFKYANCSNSCFIVAYVYLDRFAQRQPLLPINSFNVHRLLITSVLVAAKFMDDLCYNN 120
           +RIFKY+ CS SCF++A++Y+D F  +   L +   NVHRL+IT+V++AAK  DD  +NN
Sbjct: 82  DRIFKYSCCSPSCFVIAHIYIDHFLHKTRAL-LKPLNVHRLIITTVMLAAKVFDDRYFNN 141

Query: 121 GFYARVGGISTREINFLEVDFLFGLGFHLNVTPNTFHTYCSCLHKEM---LQLKPPLSNS 180
            +YARVGG++TRE+N LE++ LF L F L V P TFHT+C  L K+     Q++ P+  +
Sbjct: 142 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQNRDGFQIEWPIKEA 201

Query: 181 LLTSSET 185
              + ET
Sbjct: 202 CRANKET 205

The following BLAST results are available for this feature:

BLAST of Csor.00g257160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80513	2.4e-65	64.29	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q9FKF6	6.3e-58	56.54	Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1	[more]
Q9LY16	4.1e-57	63.86	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]
Q7XC35	9.8e-51	51.92	Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1	[more]
Q75HV0	2.8e-37	47.90	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]

BLAST of Csor.00g257160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574814.1	1.56e-146	100.00	Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022958930.1	4.47e-146	99.52	cyclin-U4-1-like [Cucurbita moschata]	[more]
XP_023548896.1	1.50e-144	98.57	cyclin-U4-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023006685.1	1.23e-143	98.10	cyclin-U4-1-like [Cucurbita maxima]	[more]
XP_022155727.1	1.53e-111	83.57	cyclin-U4-1-like [Momordica charantia]	[more]

BLAST of Csor.00g257160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4V3	2.16e-146	99.52	Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111460076 PE=3 SV=1	[more]
A0A6J1L0U3	5.95e-144	98.10	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499346 PE=3 SV=1	[more]
A0A6J1DQ51	7.42e-112	83.57	Cyclin OS=Momordica charantia OX=3673 GN=LOC111022783 PE=3 SV=1	[more]
A0A1S4E2M4	7.09e-104	77.78	cyclin-U4-1-like OS=Cucumis melo OX=3656 GN=LOC103498997 PE=3 SV=1	[more]
A0A0A0KER4	1.23e-103	76.26	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G078670 PE=3 SV=1	[more]

BLAST of Csor.00g257160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44740.1	1.7e-66	64.29	cyclin p4;1	[more]
AT5G61650.1	4.5e-59	56.54	CYCLIN P4;2	[more]
AT5G07450.1	2.9e-58	63.86	cyclin p4;3	[more]
AT3G21870.1	4.8e-37	42.71	cyclin p2;1	[more]
AT3G63120.1	3.2e-33	41.18	cyclin p1;1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 39..149 e-value: 2.8E-37 score: 128.6
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 1..209 e-value: 1.9E-76 score: 254.5
None	No IPR available	GENE3D	1.10.472.10		coord: 3..209 e-value: 2.3E-56 score: 192.7
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 6..207
None	No IPR available	PANTHER	PTHR15615:SF91	CYCLIN-U4-1	coord: 6..207
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 54..142 e-value: 8.39097E-4 score: 35.2921
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 56..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g257160.m01	Csor.00g257160.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0019901	protein kinase binding