Csor.00g256830 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g256830
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	COP9 signalosome complex subunit 1-like
Location	Csor_Chr17: 71783 .. 74534 (+)
RNA-Seq Expression	Csor.00g256830
Synteny	Csor.00g256830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTTCTGGAGAAGCAAATCCGATGGCCACAGCATCAAACCGAAAGATAATTATGGTAACTTCGATAGCGATGAAGAAGGAAAAGGCCACTCTCCGACGCCGTTCTTGAAGGGGGGCAAGCATTTCGACATCCAAGCATACGCAAGCAACTACCACCGCAGTACCAAAATCCTCCGCCTCATATTCATCGCCGATCGCTTCGGCCACGCCAATGAAAGGCGGCGGAGAATGCAACTGGAGGCACTCCGAATCGCGTACGATATAGCCAAAAAGGGCAACGACGTGAATGTGTTCATCAAAATCGTGCGAAAAATTGACGGGAGATTGGGCCCTAATTACGACATGGATGAAAATTGGTGCAACTCGGTGATTGAGGGGAGGCGTGTGATGAGCGAAATGCTACAGAGATGCGCGAAGAATTGTGAGGTATGAATTGAATCAGTAAATCAAATTCTGTAGTGATTATTGAATTATCTCGATATATATAACCATCATTCTCTGCGCGAAGAATTGTGAGGTATGAAATGAACCAGTAAATCAAATTCTGTAGTGATTATTGAATTATCTCGATATATATACACCTCATTGGTGATTTTGTGATAGAAATCTTACACGGAAAGAACCATATGTGCGGAGGACGCAAGAAACGTGTTCAATTCGATAGCAGTTTTCTACGAGGACCACGGCGCTCTTACGAGGGCTTATGCGTTTTACAAGAAGAGCGTACATTTCTGCAGGAGCGATAAGAATTACTCAGAAGTGCTAAGGCGTTTGATTGTGGTGGTGATTGAGTTGGGGCAGTTTGAAGCTTCTGGGGAGATTGCTGAAAAAGGAATGCAATATCCAAATCTTAATCCTATTACAATGGAGACTCTGCGCTGTGCTCTGGGACTGGCTCGCTTCAAGGCACATTGCTATAAAGACGCTGCTCATCAGGTTTGGCTTAGCCAATCCATCATCATTTCCATGTCAATAAATTCTTCCGTAACTCATATTCTTAGGAATATACATGCAGCTCTTGGGAGTAAGTAAAGAATTGGGAAACCGATTTTCAAAAGTCATGGCTGCTCATGATATTGCTACCTTTGGCGCCCTATGTGCACTCGCAACTTTTGATCCAATAGAGTTCAAGGCACCAATTTTTCCATTTTTCTTTTCTAATTCTCCATTTACTTTGCACAGAATTTTATTTAGTCACTGGTTTTTTACATCCCCAGACTTCAGTTATAGATAATCAGAACTTTCATTTCTACTTGGATTCAGCTCTGGAAGTCAAGGAGCTCGTCAGGGATTTTTACTTGAGGTATCCTAGTGAACTTTGATTCATCTTTTCTCAACCAAACTTCATGTTCAGATTCTTAGTGTATGATGATCTATTGGCAGGCGTTATTGTTCGTGCTTCAGACACCTTGATAACTTGAGAGAATGGCTGTTGGCTGACATATATTTCTTCAATCACTACGAGACACTGTATAATAAAATCAGAAACAGAGCACTTATTGTCTACACCGAGCCCTTTGTGGCAGTTGGTTTGCAGAGAGTGGCTGTTGTTTTTGGTACAAACATTGAAGCTATTGAGAAGCAGCTCCTGGCTTTAATAAACACAAACCAAATTCAGGTCTTCTTAGCTCCCATTTTTCAAAGTTTGGTCATGTAATTCTTTACTAATAACCTCTCCTTTGTGTGTACTAGGCCGATGTTGACTCCATCAATAAAGTTGTACATTTCCCAAGACATGAAGGAAATGGAAGTTTCCCACAGGGTTTGCAGAGTAGCGTGGCTGAATTTGATCAGGTACATTCTGTTGTTAAACACATACTTTATTCGTAATGGTACTTGTATTATAGTATATCATAAACTAGAAACGCTATATGTTCTTTACTATACATCTGATGAGTAAGGCTGTTAATTCTTTTTCAACAAACAACTAAAACACAAACACAATATTGAAGCGTTGAGATAATAAGTATTCTACATTATCAAAAACAAAAGACTCATTGAGTACAAGTTGGGAGGTAGCGTTGTGGTTTAAGGTGGTAATAGGGTATGAAGGATGAAGGGAGAGGGGAATAGGGTAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGAGGGTGCGTGGATCCTCCACGTCTTTGGCCGCACCTATAAACGAGGCTGCCCTCCCTCCCTCCCAAACTCCATGCTGGCTGCTGGCTGGAATGTGTGGGGATCCACCTACACCCTACACCCCTACCGCCCCCAAATTCATCCTCCACTGTTTTCTATTTATTTTCCGCTCATGTGGACCATTGCCATTCCATCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCATTTAATTATAACTTCCTTACCCCATCCTTTAATAAATATTTTTCTCACTAATCATATATTTTTGTATTTGTATTTTGGGGGGAATGATATGATATCCCACATTTGATTTCACAAGCGCTGCCCGACTTATAGATTGAAAAGGGTTTTATGTTTTAATGAAAGTCACGCCATTGCCAACCCACACCTCTCTTTTCCCCCTCCTTCCTTCATTTTCAAGCTTTCTTAAAAGGCAATGACATGGCATCAGTTTAATGGGATTAGTAGAACCGAGTTTTTGTCTTGATCAATTGAGTTATGTTCATATTAACATTTATTTTTCTTTTTTTTAGAATAAATGA

mRNA sequence

ATGCATTTCTGGAGAAGCAAATCCGATGGCCACAGCATCAAACCGAAAGATAATTATGGTAACTTCGATAGCGATGAAGAAGGAAAAGGCCACTCTCCGACGCCGTTCTTGAAGGGGGGCAAGCATTTCGACATCCAAGCATACGCAAGCAACTACCACCGCAGTACCAAAATCCTCCGCCTCATATTCATCGCCGATCGCTTCGGCCACGCCAATGAAAGGCGGCGGAGAATGCAACTGGAGGCACTCCGAATCGCGTACGATATAGCCAAAAAGGGCAACGACGTGAATGTGTTCATCAAAATCGTGCGAAAAATTGACGGGAGATTGGGCCCTAATTACGACATGGATGAAAATTGGTGCAACTCGGTGATTGAGGGGAGGCGTGTGATGAGCGAAATGCTACAGAGATGCGCGAAGAATTGTGAGAAATCTTACACGGAAAGAACCATATGTGCGGAGGACGCAAGAAACGTGTTCAATTCGATAGCAGTTTTCTACGAGGACCACGGCGCTCTTACGAGGGCTTATGCGTTTTACAAGAAGAGCGTACATTTCTGCAGGAGCGATAAGAATTACTCAGAAGTGCTAAGGCGTTTGATTGTGGTGGTGATTGAGTTGGGGCAGTTTGAAGCTTCTGGGGAGATTGCTGAAAAAGGAATGCAATATCCAAATCTTAATCCTATTACAATGGAGACTCTGCGCTGTGCTCTGGGACTGGCTCGCTTCAAGGCACATTGCTATAAAGACGCTGCTCATCAGCTCTTGGGAGTAAGTAAAGAATTGGGAAACCGATTTTCAAAAGTCATGGCTGCTCATGATATTGCTACCTTTGGCGCCCTATGTGCACTCGCAACTTTTGATCCAATAGAGTTCAAGACTTCAGTTATAGATAATCAGAACTTTCATTTCTACTTGGATTCAGCTCTGGAAGTCAAGGAGCTCGTCAGGGATTTTTACTTGAGGCGTTATTGTTCGTGCTTCAGACACCTTGATAACTTGAGAGAATGGCTGTTGGCTGACATATATTTCTTCAATCACTACGAGACACTGTATAATAAAATCAGAAACAGAGCACTTATTGTCTACACCGAGCCCTTTGTGGCAGTTGGTTTGCAGAGAGTGGCTGTTGTTTTTGGTACAAACATTGAAGCTATTGAGAAGCAGCTCCTGGCTTTAATAAACACAAACCAAATTCAGGCCGATGTTGACTCCATCAATAAAGTTGTACATTTCCCAAGACATGAAGGAAATGGAAGTTTCCCACAGGGTTTGCAGAGTAGCGTGGCTGAATTTGATCAGAATAAATGA

Coding sequence (CDS)

ATGCATTTCTGGAGAAGCAAATCCGATGGCCACAGCATCAAACCGAAAGATAATTATGGTAACTTCGATAGCGATGAAGAAGGAAAAGGCCACTCTCCGACGCCGTTCTTGAAGGGGGGCAAGCATTTCGACATCCAAGCATACGCAAGCAACTACCACCGCAGTACCAAAATCCTCCGCCTCATATTCATCGCCGATCGCTTCGGCCACGCCAATGAAAGGCGGCGGAGAATGCAACTGGAGGCACTCCGAATCGCGTACGATATAGCCAAAAAGGGCAACGACGTGAATGTGTTCATCAAAATCGTGCGAAAAATTGACGGGAGATTGGGCCCTAATTACGACATGGATGAAAATTGGTGCAACTCGGTGATTGAGGGGAGGCGTGTGATGAGCGAAATGCTACAGAGATGCGCGAAGAATTGTGAGAAATCTTACACGGAAAGAACCATATGTGCGGAGGACGCAAGAAACGTGTTCAATTCGATAGCAGTTTTCTACGAGGACCACGGCGCTCTTACGAGGGCTTATGCGTTTTACAAGAAGAGCGTACATTTCTGCAGGAGCGATAAGAATTACTCAGAAGTGCTAAGGCGTTTGATTGTGGTGGTGATTGAGTTGGGGCAGTTTGAAGCTTCTGGGGAGATTGCTGAAAAAGGAATGCAATATCCAAATCTTAATCCTATTACAATGGAGACTCTGCGCTGTGCTCTGGGACTGGCTCGCTTCAAGGCACATTGCTATAAAGACGCTGCTCATCAGCTCTTGGGAGTAAGTAAAGAATTGGGAAACCGATTTTCAAAAGTCATGGCTGCTCATGATATTGCTACCTTTGGCGCCCTATGTGCACTCGCAACTTTTGATCCAATAGAGTTCAAGACTTCAGTTATAGATAATCAGAACTTTCATTTCTACTTGGATTCAGCTCTGGAAGTCAAGGAGCTCGTCAGGGATTTTTACTTGAGGCGTTATTGTTCGTGCTTCAGACACCTTGATAACTTGAGAGAATGGCTGTTGGCTGACATATATTTCTTCAATCACTACGAGACACTGTATAATAAAATCAGAAACAGAGCACTTATTGTCTACACCGAGCCCTTTGTGGCAGTTGGTTTGCAGAGAGTGGCTGTTGTTTTTGGTACAAACATTGAAGCTATTGAGAAGCAGCTCCTGGCTTTAATAAACACAAACCAAATTCAGGCCGATGTTGACTCCATCAATAAAGTTGTACATTTCCCAAGACATGAAGGAAATGGAAGTTTCCCACAGGGTTTGCAGAGTAGCGTGGCTGAATTTGATCAGAATAAATGA

Protein sequence

MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGLARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGSFPQGLQSSVAEFDQNK

Homology

[Close]

BLAST of Csor.00g256830 vs. ExPASy Swiss-Prot
Match: P45432 (COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CSN1 PE=1 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 8.5e-73
Identity = 168/399 (42.11%), Postives = 235/399 (58.90%), Query Frame = 0


Query: 40  GKHFDIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVF 99
           G+  DI+AYA+ Y   TKI+RL+FIA+  G        +Q +ALR+AYD  KKG +  +F
Sbjct: 31  GEPLDIEAYAALYKGRTKIMRLLFIANHCG----GNHALQFDALRMAYDEIKKGENTQLF 90

Query: 100 IKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNV 159
            ++V KI  RLG  Y MD  WC +V   RR   + ++   +N   SY    I  E  R  
Sbjct: 91  REVVNKIGNRLGEKYGMDLAWCEAV--DRRAEQKKVK--LENELSSYRTNLI-KESIRMG 150

Query: 160 FNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEK 219
           +N    FY   G L  A+  Y ++  +C + K+   +    I+V IE+GQF        K
Sbjct: 151 YNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNK 210

Query: 220 GMQYP-NLNPITMETLRCALGLARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATF 279
             Q P  L P+    LRCA GLA  +   YK AA + L V+ ELGN +++V+A  DIAT+
Sbjct: 211 AEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATY 270

Query: 280 GALCALATFDPIEFKTSVIDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWL 339
           G LCALA+FD  E K  VIDN NF  +L+   +V+EL+ DFY  RY SC  +L +L+  L
Sbjct: 271 GGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNL 330

Query: 340 LADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQ 399
           L DI+  +H +TLY++IR +ALI YT PFV+V L R+A  F T++  +EK+L ALI  NQ
Sbjct: 331 LLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQ 390

Query: 400 IQADVDSINKVVHFPRH--EGNGSFPQGLQSSVAEFDQN 436
           IQA +DS NK++ + RH  + N +F + LQ    EFD++
Sbjct: 391 IQARIDSHNKIL-YARHADQRNATFQKVLQMG-NEFDRD 418

[Close]

BLAST of Csor.00g256830 vs. ExPASy Swiss-Prot
Match: Q54QX3 (COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=csn1 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.4e-45
Identity = 112/366 (30.60%), Postives = 191/366 (52.19%), Query Frame = 0


Query: 43  FDIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKI 102
           FD++ Y +NY   TKI RLIFIAD         +++++EA  +A    +K  ++ ++  I
Sbjct: 30  FDLETYINNYSGFTKIHRLIFIADNC-------KQLEVEAYNMALKEVQKTPNLELYNTI 89

Query: 103 VRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNS 162
           + K  G L    ++D  +  ++ +   +  + L++     + +  + +I     R   N 
Sbjct: 90  INKSHGIL----ELDPVYIENLSKKNSLQLDKLEQDLNTAKSNMVKDSI-----RFAQND 149

Query: 163 IAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQ 222
           +  FY   G    A   + ++  +C + K+   +   +I + ++   +  +     K  Q
Sbjct: 150 LGEFYYKIGDHQNALKCFIRTRDYCTTSKHVLAMCFNIIKLGVDTQNYTHAPSYIAKAEQ 209

Query: 223 YPNLNPITMETLRCALGLARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALC 282
            P+L+ ++   LR   GL       YK AA + +    E  N FS +++  DIA +G LC
Sbjct: 210 SPDLDNVSNAKLRSVNGLYNLDGSRYKLAARKFIETPFEQSNVFSDIISPQDIAYYGGLC 269

Query: 283 ALATFDPIEFKTSVIDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADI 342
           ALATFD  E K  VID+  F  YL+   E++EL+ DFY  +Y SC ++LD ++  LL DI
Sbjct: 270 ALATFDRNELKKKVIDDPMFKNYLELVPELRELINDFYNTKYGSCLKYLDKMKPILLLDI 329

Query: 343 YFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQAD 402
           + + H E LY +IR++AL+ Y  P+ +V +  +A  F T +  +EK++  LI  N+IQA 
Sbjct: 330 HLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAFNTTVTLLEKEISKLIMENEIQAR 379

Query: 403 VDSINK 409
           +DS NK
Sbjct: 390 IDSHNK 379

[Close]

BLAST of Csor.00g256830 vs. ExPASy Swiss-Prot
Match: Q6NRT5 (COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-41
Identity = 119/393 (30.28%), Postives = 201/393 (51.15%), Query Frame = 0


Query: 44  DIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIV 103
           D++ YAS+Y    +I RL FIADR         ++++EAL++A    ++  +V+V+  I 
Sbjct: 43  DLEQYASSYSGLMRIERLQFIADRC-------PQLRVEALKMALSFVQRTFNVDVYEDIH 102

Query: 104 RKI---------------DGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTE 163
           RK+               +G + P   +D +W  +  +   +  E L    KN    Y  
Sbjct: 103 RKLAEASREVQNAPDAVPEGSMEPP-ALDTSWVEATRKKALLKLEKLDTDLKN----YKG 162

Query: 164 RTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSEVLRRLIVVVIEL- 223
            +I  E  R   + +   Y D G L+ A   Y ++  +C S K+   +   +I V + L 
Sbjct: 163 NSI-KESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQ 222

Query: 224 ---------GQFEASGEIAEKGMQYPNLNPITMETLRCALGLARFKAHCYKDAAHQLLGV 283
                     + E++ EIAE+  +  +     +  L+CA GLA   A  YK AA   L  
Sbjct: 223 NWSHVLSYVSKAESTPEIAEQRGERDSQTQAVLTKLKCAAGLAELAARKYKQAAKCFLLA 282

Query: 284 SKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQNFHFYLDSALEVKELVRD 343
           S +  + F ++++  ++A +G LCALATFD  E + +VI + +F  +L+   +V++++  
Sbjct: 283 SFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFK 342

Query: 344 FYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVV 403
           FY  +Y SC + LD +++ LL D+Y   H  TLY +IRNRALI Y  P+V+  + ++A  
Sbjct: 343 FYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMYKMATA 402

Query: 404 FGTNIEAIEKQLLALINTNQIQADVDSINKVVH 412
           F T + A+E +L  LI    I A +DS +K+++
Sbjct: 403 FNTTVSALEDELTQLILEGLINARIDSHSKILY 421

[Close]

BLAST of Csor.00g256830 vs. ExPASy Swiss-Prot
Match: Q13098 (COP9 signalosome complex subunit 1 OS=Homo sapiens OX=9606 GN=GPS1 PE=1 SV=4)

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-39
Identity = 119/417 (28.54%), Postives = 203/417 (48.68%), Query Frame = 0


Query: 23  DSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEA 82
           D  E+ +      ++      D++ YA++Y    +I RL FIAD           +++EA
Sbjct: 22  DPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHC-------PTLRVEA 81

Query: 83  LRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNY------------------DMDENWCNSV 142
           L++A    ++  +V+++ +I RK+      +                    +D  W  + 
Sbjct: 82  LKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAWVEAT 141

Query: 143 IEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSV 202
            +   +  E L    KN    Y   +I  E  R   + +   Y D G L+ A   Y ++ 
Sbjct: 142 RKKALLKLEKLDTDLKN----YKGNSI-KESIRRGHDDLGDHYLDCGDLSNALKCYSRAR 201

Query: 203 HFCRSDKNYSEVLRRLIVVVIEL----------GQFEASGEIAEKGMQYPNLNPITMETL 262
            +C S K+   +   +I V + L           + E++ EIAE+  +  +     +  L
Sbjct: 202 DYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKL 261

Query: 263 RCALGLARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKT 322
           +CA GLA   A  YK AA  LL  S +  + F ++++  ++A +G LCALATFD  E + 
Sbjct: 262 KCAAGLAELAARKYKQAAKCLLLASFDHCD-FPELLSPSNVAIYGGLCALATFDRQELQR 321

Query: 323 SVIDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNK 382
           +VI + +F  +L+   +V++++  FY  +Y SC + LD +++ LL D+Y   H  TLY +
Sbjct: 322 NVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQ 381

Query: 383 IRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVH 412
           IRNRALI Y  P+V+  + R+A  F T + A+E +L  LI    I A VDS +K+++
Sbjct: 382 IRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILY 425

[Close]

BLAST of Csor.00g256830 vs. ExPASy Swiss-Prot
Match: Q99LD4 (COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.8e-39
Identity = 118/414 (28.50%), Postives = 205/414 (49.52%), Query Frame = 0


Query: 23  DSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEA 82
           D  E+ +      ++      D++ YA++Y    +I RL FIADR          +++EA
Sbjct: 6   DPQEDPQNAPDVNYVVENPTLDLEQYAASYSGLMRIERLQFIADRC-------PPLRVEA 65

Query: 83  LRIAYDIAKKGNDVNVFIKIVRKI---------------DGRLGPNYDMDENWCNSVIEG 142
           L++A    ++  +V+++ +I RK+               +  + P   +D  W  +  + 
Sbjct: 66  LKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPP-PLDTAWVEATRKK 125

Query: 143 RRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFC 202
             +  E L    KN    Y   +I  E  R   + +   Y D G L+ A   Y ++  +C
Sbjct: 126 ALLKLEKLDTDLKN----YKGNSI-KESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYC 185

Query: 203 RSDKNYSEVLRRLIVVVIEL----------GQFEASGEIAEKGMQYPNLNPITMETLRCA 262
            S K+   +   +I V + L           + E++ EIAE+  +  +     +  L+CA
Sbjct: 186 TSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCA 245

Query: 263 LGLARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVI 322
            GLA   A  YK AA   L  S +  + F ++++  ++A +G LCALATFD  E + +VI
Sbjct: 246 AGLAELAARKYKQAAKCFLLASFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVI 305

Query: 323 DNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRN 382
            + +F  +L+   +V++++  FY  +Y SC + LD +++ LL D+Y   H  TLY +IRN
Sbjct: 306 SSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRN 365

Query: 383 RALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVH 412
           RALI Y  P+V+  + ++A  F T + A+E +L  LI    I A +DS +K+++
Sbjct: 366 RALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHSKILY 405

[Close]

BLAST of Csor.00g256830 vs. NCBI nr
Match: KAG6574781.1 (COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 881 bits (2276), Expect = 0.0
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0


Query: 1   MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60
           MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR
Sbjct: 1   MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60

Query: 61  LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120
           LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW
Sbjct: 61  LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120

Query: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180
           CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY
Sbjct: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180

Query: 181 KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240
           KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL
Sbjct: 181 KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240

Query: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ 300
           ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ
Sbjct: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ 300

Query: 301 NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL 360
           NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL
Sbjct: 301 NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL 360

Query: 361 IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS 420
           IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS
Sbjct: 361 IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS 420

Query: 421 FPQGLQSSVAEFDQNK 436
           FPQGLQSSVAEFDQNK
Sbjct: 421 FPQGLQSSVAEFDQNK 436

[Close]

BLAST of Csor.00g256830 vs. NCBI nr
Match: XP_022958876.1 (COP9 signalosome complex subunit 1-like [Cucurbita moschata])

HSP 1 Score: 870 bits (2249), Expect = 0.0
Identity = 431/434 (99.31%), Postives = 433/434 (99.77%), Query Frame = 0


Query: 1   MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60
           MHFWRSKSDGHS KPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR
Sbjct: 1   MHFWRSKSDGHSNKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60

Query: 61  LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120
           LIFIADRFG+ANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW
Sbjct: 61  LIFIADRFGNANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120

Query: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180
           CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY
Sbjct: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180

Query: 181 KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240
           KKSVHFCRSDKNYSE+LRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL
Sbjct: 181 KKSVHFCRSDKNYSELLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240

Query: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ 300
           ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ
Sbjct: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ 300

Query: 301 NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL 360
           NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL
Sbjct: 301 NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL 360

Query: 361 IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS 420
           IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS
Sbjct: 361 IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS 420

Query: 421 FPQGLQSSVAEFDQ 434
           FPQGLQSSVAEFDQ
Sbjct: 421 FPQGLQSSVAEFDQ 434

[Close]

BLAST of Csor.00g256830 vs. NCBI nr
Match: XP_023547756.1 (COP9 signalosome complex subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578 bits (1490), Expect = 1.92e-205
Identity = 284/296 (95.95%), Postives = 290/296 (97.97%), Query Frame = 0


Query: 1   MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60
           MHFWRSKSDGHS KP+DNYGNFDSDEE KG+SPTPFLKGGKHFDIQAYASNYHRSTKILR
Sbjct: 1   MHFWRSKSDGHSDKPEDNYGNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILR 60

Query: 61  LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120
           LIFIADRFG+ANERRRRMQLEALRIAYDIAKKG DVNVFIKIVRKIDGRLGPNYDMDENW
Sbjct: 61  LIFIADRFGNANERRRRMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENW 120

Query: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180
           CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY
Sbjct: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180

Query: 181 KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240
           KKSVHFCRSDKNYSE+LRRLIVVVIELGQFEAS EIAEKGMQYPNL+PITMETLRCALGL
Sbjct: 181 KKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLHPITMETLRCALGL 240

Query: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSV 296
           ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFK  +
Sbjct: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKNFI 296

[Close]

BLAST of Csor.00g256830 vs. NCBI nr
Match: XP_023005986.1 (COP9 signalosome complex subunit 1-like [Cucurbita maxima])

HSP 1 Score: 572 bits (1473), Expect = 7.45e-203
Identity = 282/296 (95.27%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60
           MHF RSKSDGHS KP+DNYGNFDSDEE KG+SPTPFLKGGKHFDIQAYASNYHRSTKILR
Sbjct: 1   MHFCRSKSDGHSDKPEDNYGNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILR 60

Query: 61  LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120
           LIFIADRFG+ANERRR MQLEALRIAYDIAKKG DVNVFIKIVRKIDGRLGPNYDMDENW
Sbjct: 61  LIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENW 120

Query: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180
           CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY
Sbjct: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180

Query: 181 KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240
           KKSVHFCRSDKNYSE+LRRLIVVVIELGQFEAS EIAEKGMQYPNLNPITMETLRCALGL
Sbjct: 181 KKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLNPITMETLRCALGL 240

Query: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSV 296
           ARFK+HCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFK  +
Sbjct: 241 ARFKSHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKNFI 296

[Close]

BLAST of Csor.00g256830 vs. NCBI nr
Match: KAG7013361.1 (COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 566 bits (1459), Expect = 5.77e-201
Identity = 278/281 (98.93%), Postives = 280/281 (99.64%), Query Frame = 0


Query: 1   MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60
           MHFWRSKSDGHS KPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR
Sbjct: 1   MHFWRSKSDGHSNKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60

Query: 61  LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120
           LIFIADRFG+ANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW
Sbjct: 61  LIFIADRFGNANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120

Query: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180
           CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY
Sbjct: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180

Query: 181 KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240
           KKSVHFCRSDKNYSE+LRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL
Sbjct: 181 KKSVHFCRSDKNYSELLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240

Query: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGAL 281
           ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGAL
Sbjct: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGAL 281

[Close]

BLAST of Csor.00g256830 vs. ExPASy TrEMBL
Match: A0A6J1H3C9 (COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460031 PE=3 SV=1)

HSP 1 Score: 870 bits (2249), Expect = 0.0
Identity = 431/434 (99.31%), Postives = 433/434 (99.77%), Query Frame = 0


Query: 1   MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60
           MHFWRSKSDGHS KPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR
Sbjct: 1   MHFWRSKSDGHSNKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60

Query: 61  LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120
           LIFIADRFG+ANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW
Sbjct: 61  LIFIADRFGNANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120

Query: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180
           CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY
Sbjct: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180

Query: 181 KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240
           KKSVHFCRSDKNYSE+LRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL
Sbjct: 181 KKSVHFCRSDKNYSELLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240

Query: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ 300
           ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ
Sbjct: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQ 300

Query: 301 NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL 360
           NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL
Sbjct: 301 NFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRAL 360

Query: 361 IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS 420
           IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS
Sbjct: 361 IVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRHEGNGS 420

Query: 421 FPQGLQSSVAEFDQ 434
           FPQGLQSSVAEFDQ
Sbjct: 421 FPQGLQSSVAEFDQ 434

[Close]

BLAST of Csor.00g256830 vs. ExPASy TrEMBL
Match: A0A6J1KWI7 (COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498865 PE=4 SV=1)

HSP 1 Score: 572 bits (1473), Expect = 3.60e-203
Identity = 282/296 (95.27%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MHFWRSKSDGHSIKPKDNYGNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKILR 60
           MHF RSKSDGHS KP+DNYGNFDSDEE KG+SPTPFLKGGKHFDIQAYASNYHRSTKILR
Sbjct: 1   MHFCRSKSDGHSDKPEDNYGNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKILR 60

Query: 61  LIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENW 120
           LIFIADRFG+ANERRR MQLEALRIAYDIAKKG DVNVFIKIVRKIDGRLGPNYDMDENW
Sbjct: 61  LIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDENW 120

Query: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180
           CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY
Sbjct: 121 CNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFY 180

Query: 181 KKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALGL 240
           KKSVHFCRSDKNYSE+LRRLIVVVIELGQFEAS EIAEKGMQYPNLNPITMETLRCALGL
Sbjct: 181 KKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLNPITMETLRCALGL 240

Query: 241 ARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSV 296
           ARFK+HCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFK  +
Sbjct: 241 ARFKSHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKNFI 296

[Close]

BLAST of Csor.00g256830 vs. ExPASy TrEMBL
Match: A0A067HDM6 (PCI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g013559mg PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 2.27e-100
Identity = 183/398 (45.98%), Postives = 246/398 (61.81%), Query Frame = 0


Query: 40  GKHFDIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVF 99
           G+  D++AYAS Y   TKI RL+FIAD    A+     MQLEALR+AYD  KKG +  +F
Sbjct: 32  GEQLDVEAYASLYQGRTKITRLMFIADHCDIAS-----MQLEALRMAYDEIKKGENTQLF 91

Query: 100 IKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNV 159
            ++V+KIDGRLGPNY MDE WC+SV        E L+      E +     +  E  R  
Sbjct: 92  REVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKEKLEN-----ELNAYRTNLIKESIRMG 151

Query: 160 FNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEK 219
           +N    FY  HGAL  A+  Y ++  +C + K+   +    I+V IE+GQF        K
Sbjct: 152 YNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSK 211

Query: 220 GMQYPN-LNPITMETLRCALGLARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATF 279
             Q P  L P+T+  LRCA GLA  +A  YK AA + L V  +LGN +++V+AA D+AT+
Sbjct: 212 AEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATY 271

Query: 280 GALCALATFDPIEFKTSVIDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWL 339
           G LCALA+FD  E K+ VIDN NF  +L+   EV+EL+ DFY  RY SC  +L NL+  L
Sbjct: 272 GGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANL 331

Query: 340 LADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQ 399
           L DI+  +H ETLY++IRN+ALI YT PFV+V L  +A  F T++  IEK+L ALI  NQ
Sbjct: 332 LLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQ 391

Query: 400 IQADVDSINKVVHFPRH--EGNGSFPQGLQSSVAEFDQ 434
           IQA +DS NK++ + RH  + N +F + LQ+  +EFDQ
Sbjct: 392 IQARIDSHNKIL-YARHADQRNATFQRVLQTG-SEFDQ 417

[Close]

BLAST of Csor.00g256830 vs. ExPASy TrEMBL
Match: V4U862 (PCI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10020177mg PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 2.27e-100
Identity = 183/398 (45.98%), Postives = 246/398 (61.81%), Query Frame = 0


Query: 40  GKHFDIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVF 99
           G+  D++AYAS Y   TKI RL+FIAD    A+     MQLEALR+AYD  KKG +  +F
Sbjct: 32  GEQLDVEAYASLYQGRTKITRLMFIADHCDIAS-----MQLEALRMAYDEIKKGENTQLF 91

Query: 100 IKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNV 159
            ++V+KIDGRLGPNY MDE WC+SV        E L+      E +     +  E  R  
Sbjct: 92  REVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKEKLEN-----ELNAYRTNLIKESIRMG 151

Query: 160 FNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEK 219
           +N    FY  HGAL  A+  Y ++  +C + K+   +    I+V IE+GQF        K
Sbjct: 152 YNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSK 211

Query: 220 GMQYPN-LNPITMETLRCALGLARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATF 279
             Q P  L P+T+  LRCA GLA  +A  YK AA + L V  +LGN +++V+AA D+AT+
Sbjct: 212 AEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATY 271

Query: 280 GALCALATFDPIEFKTSVIDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWL 339
           G LCALA+FD  E K+ VIDN NF  +L+   EV+EL+ DFY  RY SC  +L NL+  L
Sbjct: 272 GGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANL 331

Query: 340 LADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQ 399
           L DI+  +H ETLY++IRN+ALI YT PFV+V L  +A  F T++  IEK+L ALI  NQ
Sbjct: 332 LLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQ 391

Query: 400 IQADVDSINKVVHFPRH--EGNGSFPQGLQSSVAEFDQ 434
           IQA +DS NK++ + RH  + N +F + LQ+  +EFDQ
Sbjct: 392 IQARIDSHNKIL-YARHADQRNATFQRVLQTG-SEFDQ 417

[Close]

BLAST of Csor.00g256830 vs. ExPASy TrEMBL
Match: B9RDL0 (Cop9 signalosome complex subunit, putative OS=Ricinus communis OX=3988 GN=RCOM_1613810 PE=4 SV=1)

HSP 1 Score: 304 bits (779), Expect = 5.69e-96
Identity = 181/419 (43.20%), Postives = 249/419 (59.43%), Query Frame = 0


Query: 23  DSDEE-----GKGHSPTPFLKGGKHFDIQAYASNYHRSTKILRLIFIADRFGHANERRRR 82
           D+D+E     G+  S    +  G+  DI+AYA  Y   TKI RL+FIAD   +       
Sbjct: 2   DADDEIYANGGESTSRNRPIISGEQLDIEAYAGLYTGRTKITRLLFIADHCDNPT----- 61

Query: 83  MQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQR 142
           MQLEALR+AY+  KKG +  +F ++V+KIDGRLGPNY MD  WC++V        E L+ 
Sbjct: 62  MQLEALRMAYEEIKKGENTQLFREVVQKIDGRLGPNYSMDNTWCDTVDRRAEQRKERLEN 121

Query: 143 CAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSEVL 202
                E +     +  E  R  +N    FY  HGAL  A+  Y ++  +C + K+   + 
Sbjct: 122 -----ELNAYRTNLIKESIRMGYNDFGDFYYAHGALGEAFKSYVRTRDYCTTSKHIIHMC 181

Query: 203 RRLIVVVIELGQFEASGEIAEKGMQYPN-LNPITMETLRCALGLARFKAHCYKDAAHQLL 262
              I+V IE+GQF        K  Q P  L+PIT+  LRCA GLA  +A  YK AA + L
Sbjct: 182 MSAILVSIEMGQFTHVTSYVSKAEQTPEALDPITVAKLRCAAGLAHLEARKYKLAARKFL 241

Query: 263 GVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDNQNFHFYLDSALEVKELV 322
            V+ ELGN +++V+A  D+AT+G LCALA+F+  E K  VIDN NF  +L+   EV+EL+
Sbjct: 242 EVAPELGNSYTEVIAPQDVATYGGLCALASFERTELKNKVIDNLNFRNFLELVPEVRELI 301

Query: 323 RDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVA 382
            DFY   Y SC  +L NL+  LL DI+  +H ETLY++IRN+ALI YT PFV+V L  +A
Sbjct: 302 HDFYSSHYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMA 361

Query: 383 VVFGTNIEAIEKQLLALINTNQIQADVDSINKVVHFPRH--EGNGSFPQGLQSSVAEFD 433
             F T++  +EK+L ALI  NQIQA +DS NK++ + RH  + N +F + LQ+   EFD
Sbjct: 362 NAFKTSVAGLEKELEALITDNQIQARIDSHNKIL-YARHADQRNATFQRVLQTGN-EFD 408

[Close]

BLAST of Csor.00g256830 vs. TAIR 10
Match: AT3G61140.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 275.8 bits (704), Expect = 6.0e-74
Identity = 168/399 (42.11%), Postives = 235/399 (58.90%), Query Frame = 0


Query: 40  GKHFDIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVF 99
           G+  DI+AYA+ Y   TKI+RL+FIA+  G        +Q +ALR+AYD  KKG +  +F
Sbjct: 31  GEPLDIEAYAALYKGRTKIMRLLFIANHCG----GNHALQFDALRMAYDEIKKGENTQLF 90

Query: 100 IKIVRKIDGRLGPNYDMDENWCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNV 159
            ++V KI  RLG  Y MD  WC +V   RR   + ++   +N   SY    I  E  R  
Sbjct: 91  REVVNKIGNRLGEKYGMDLAWCEAV--DRRAEQKKVK--LENELSSYRTNLI-KESIRMG 150

Query: 160 FNSIAVFYEDHGALTRAYAFYKKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEK 219
           +N    FY   G L  A+  Y ++  +C + K+   +    I+V IE+GQF        K
Sbjct: 151 YNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNK 210

Query: 220 GMQYP-NLNPITMETLRCALGLARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATF 279
             Q P  L P+    LRCA GLA  +   YK AA + L V+ ELGN +++V+A  DIAT+
Sbjct: 211 AEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATY 270

Query: 280 GALCALATFDPIEFKTSVIDNQNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWL 339
           G LCALA+FD  E K  VIDN NF  +L+   +V+EL+ DFY  RY SC  +L +L+  L
Sbjct: 271 GGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNL 330

Query: 340 LADIYFFNHYETLYNKIRNRALIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQ 399
           L DI+  +H +TLY++IR +ALI YT PFV+V L R+A  F T++  +EK+L ALI  NQ
Sbjct: 331 LLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQ 390

Query: 400 IQADVDSINKVVHFPRH--EGNGSFPQGLQSSVAEFDQN 436
           IQA +DS NK++ + RH  + N +F + LQ    EFD++
Sbjct: 391 IQARIDSHNKIL-YARHADQRNATFQKVLQMG-NEFDRD 418

[Close]

BLAST of Csor.00g256830 vs. TAIR 10
Match: AT3G12850.1 (COP9 signalosome complex-related / CSN complex-related )

HSP 1 Score: 57.4 bits (137), Expect = 3.4e-08
Identity = 35/108 (32.41%), Postives = 55/108 (50.93%), Query Frame = 0


Query: 44  DIQAYASNYHRSTKILRLIFIADRFGHANERRRRMQLEALRIAYDIAKKGN---DVNVFI 103
           D++AY+ NY     +LRL+ IA+           ++LEALR+AYD+ +      D+ +F 
Sbjct: 12  DVEAYSRNYEGRNLVLRLLHIAEN-SVGPMFTDDLELEALRLAYDLIRNDGIVCDMRLFT 71

Query: 104 KIVRKIDGRLGPNYDMDENW----CNSVIEGRRVMSEMLQRCAKNCEK 145
            I  KI GRLG  Y +DE W     N+ ++   ++   L+      EK
Sbjct: 72  VIAEKIQGRLGEGYLLDEKWRLTKNNNFVKQDSILRNDLESATDELEK 118

The following BLAST results are available for this feature:

BLAST of Csor.00g256830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45432	8.5e-73	42.11	COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CSN1 PE=1 ...	[more]
Q54QX3	3.4e-45	30.60	COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=csn1 ...	[more]
Q6NRT5	1.7e-41	30.28	COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1	[more]
Q13098	2.1e-39	28.54	COP9 signalosome complex subunit 1 OS=Homo sapiens OX=9606 GN=GPS1 PE=1 SV=4	[more]
Q99LD4	2.8e-39	28.50	COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1	[more]

BLAST of Csor.00g256830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574781.1	0.0	100.00	COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022958876.1	0.0	99.31	COP9 signalosome complex subunit 1-like [Cucurbita moschata]	[more]
XP_023547756.1	1.92e-205	95.95	COP9 signalosome complex subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023005986.1	7.45e-203	95.27	COP9 signalosome complex subunit 1-like [Cucurbita maxima]	[more]
KAG7013361.1	5.77e-201	98.93	COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of Csor.00g256830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3C9	0.0	99.31	COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KWI7	3.60e-203	95.27	COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498...	[more]
A0A067HDM6	2.27e-100	45.98	PCI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g013559mg PE=...	[more]
V4U862	2.27e-100	45.98	PCI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10020177mg...	[more]
B9RDL0	5.69e-96	43.20	Cop9 signalosome complex subunit, putative OS=Ricinus communis OX=3988 GN=RCOM_1...	[more]

BLAST of Csor.00g256830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61140.1	6.0e-74	42.11	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]
AT3G12850.1	3.4e-08	32.41	COP9 signalosome complex-related / CSN complex-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00753	PINT	coord: 346..428 e-value: 9.7E-8 score: 41.7
None	No IPR available	GENE3D	1.25.40.570		coord: 41..396 e-value: 1.1E-89 score: 302.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 417..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 346..428 e-value: 9.7E-8 score: 41.7
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 312..413 e-value: 1.1E-11 score: 45.2
IPR045135	26S proteasome regulatory subunit Rpn7, N-terminal	PFAM	PF10602	RPN7	coord: 117..293 e-value: 1.6E-13 score: 50.7
IPR033008	COP9 signalosome complex subunit 1	PANTHER	PTHR14145:SF2	COP9 SIGNALOSOME COMPLEX SUBUNIT 1	coord: 39..415
IPR019585	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	PANTHER	PTHR14145	26S PROTESOME SUBUNIT 6	coord: 39..415
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 341..417

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g256830.m01	Csor.00g256830.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000338	protein deneddylation
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005737	cytoplasm