Csor.00g256230 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g256230
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	40S ribosomal protein S25
Location	Csor_Chr03: 1058758 .. 1061514 (+)
RNA-Seq Expression	Csor.00g256230
Synteny	Csor.00g256230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGTTATTGCTTTAAAATCCTACAAATTATCTTCTTTTTCCTTGTATTACTTCATTTTTCTTACGGAATCGAGTAAGGCTGGTGTAGAATCATCTTGCGATTTGCTGCAATTTTTCTACATTCTCATTCTGTAGTTTAATCTATGCTAGATCACCGGGTATTTGTCTGGTTTTGTGAAAATTTGCGACGTAAGTCATTGTCGGAGTTCGTCGTTCTATAGTATTGTTATTTTACTGGAAAACAAAGCAGAATAGCCACCTTCGGTTTGCGATATAATTGTTGTGTGTTTGTATAATGTTGTAGGAAGGTTTCTCTGTTGCAATTTTCTATACATGAGGTCCAATTGTAAAATTACAAGTAATGTTTTTACTTAGTGTGGAACAGTTGGGAAGTTCTAAGTGTTTATCTGATTTATGAACATGAGTGATGTAAACTTTCTCCTACTTGGTATCCATCTGGCAGGCACCGAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGGTAATTTGTTTTGTAAGGACTGCTTTGTTTTTAATGTTTAGGCCCGTTGATGACCATTTAATTCTTGGTTTTTGAAAATTAAGCTCATAAACTCTACTTCCACCCATAAAACAATTTGTTTTTGAATATGTTTTTCAAAATCTAAGCCAAAATTTGCAAACTAAAAAACGTAGGGCATGTTTGATAACCATTTTATAAACATTTTAGAGATGTTTTCAAAATCTAAGTCAAGTTTTGAAAGCTGAAGAAGTAGTTCTTATAAACTTGTTTTTGTTTTGGAATTTAGTTATGAATTCAAAATGTTTCTCATGAATGATGATGGAAACCTTTGTGAATAAATTATGAGAAAATTTGCCCATTTTTCAAAAACTAAAAATAAAAAATCAAATGGTTATCAAACAAGATCATCGTTTTTTTAAAACTTGTTTTCTTTTTTTGGAATTTGACATTTGAGTGTTTCTTCAAGAAGTGTGAAATCATAGTAAAGAAATGGTAAGGAAATAAACACAATTAAAAAAGAAACAAATAACAAAATTGTTATCAAATGAGACCATAGTCATTAGGGCTAGTGAGTATTCAGGTACATCTTTCTTTCAGGCCTGTTACTTACTTTTGGTTCTGTTATTTTATTTCTTATGTTGTTTATTGCACAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAAGCTATGACAAGCTTCTTTCAGAAGTTCCAAAGTACAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGGTATGGCTTGCTTAATCCCATTTAGCTTGTATCTTCACATGTTGTAAATGCATGTCTTTGGATTGTTGAATATGGACCATGCGTCTTAATGTTAGTTTGAAATTTGTGTCCCCTACAATACTTCTCTCTTCAATCAGTTGAATAAGACCTGTGAGATCCCACATCGGTGGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACTTTTCTCTAGCAGACATGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGACCAAATATGACAATATCTGCTAGCAGTGAGCTTGAGTTGTTACAAATGATATCAAAGTTAAGACATTGAGCGATGTGCCATTGAGGAGGTTGTGCCTCGAAGGGAGTGGACACGAGGTGGTGTACCAGCAAGGACGCTGGACTCTGAAGAAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAATGAATCATTATTTATAAGGATGTGGAAACGTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGAGAAGCCTGATAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCTGTGAGCTTGGACTATTACAAAACCAATCCCCACTCTCCACTAAAAAACGGAATGGAAAAGAAGTTGGGGGTGGATGATTATACATTGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTGCTTTTATGAATTCCAATGTATGATTATCACATCCAAGTCAAAGACTTTTCGTACTATATTGTTATAGATCAACCTTTATTTGTTAAAATCTTCATTTAATTAAGCATGTAATCATGTTTCTATCCGTTTCTAAAACATCATCGGACTCATTCGAGCGATGATTTAAATTATAGTTGCATTGTATTACACTTTCATAATTTCTGTCTTCTGTTTTCTCATACCATATTCCAAAGTGTCATTTATTTGAGATGTTGCACTACTCCCATGTTTAAACTGCATATCCATATGGGTAACACAATTACAAAGTGATCTCTGTTGGTTTGATTTCTTGTCAGCAAGGTGTTGTATTGTGTACATTATTAATCCATGTGTATAAGCAATTATTCTTAAACCATAAGAGTTGGATATCTTTTGTGACTATCCCTTGATGTGAAGTATCTGATATCTCTAGTCAATATAAAGTGCCAAATATCCTCCATATGACCCGTTTTTTAGACGAATTCGTTTGGTTAGCATGTCATTCATGTAATCAAACCGAACTGTGGCTGGTTCTACTTGGATGGATCGTTGTCAAGATGGTAAATTGCTAAAAATCTTTCTCTGTTTGTTGTTCATTACTGTTCATCAGATCAATGGATCGTTGGCTCGTCGGGCGATAAAGGATTTAATGGCGAGAGGCTCTATTAGGCTCGTATCTGCTCATGCTAGCCAGCTAATATACACTAGAGCCACAAACACATGA

mRNA sequence

ATGGCACCGAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAAGCTATGACAAGCTTCTTTCAGAAGTTCCAAAGTACAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGATCAATGGATCGTTGGCTCGTCGGGCGATAAAGGATTTAATGGCGAGAGGCTCTATTAGGCTCGTATCTGCTCATGCTAGCCAGCTAATATACACTAGAGCCACAAACACATGA

Coding sequence (CDS)

ATGGCACCGAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAAGCTATGACAAGCTTCTTTCAGAAGTTCCAAAGTACAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGATCAATGGATCGTTGGCTCGTCGGGCGATAAAGGATTTAATGGCGAGAGGCTCTATTAGGCTCGTATCTGCTCATGCTAGCCAGCTAATATACACTAGAGCCACAAACACATGA

Protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT

Homology

[Close]

BLAST of Csor.00g256230 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.2e-45
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+VSAH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.4e-45
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ +YDKLLSE PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPS+LSDRLRI+GSLAR+AI+DLMARGSIR+VSAHASQ IYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-44
Identity = 94/107 (87.85%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATN 108
           ITPSILSDRLRINGSLARRAI++LMA+G+IR+VSAH+SQ IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of Csor.00g256230 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.5e-44
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+V+AH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 172.2 bits (435), Expect = 3.3e-42
Identity = 90/106 (84.91%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKL+SE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRAT 107
           ITPSILSDRLRINGSLAR+AI+DLM +G+IR+VS H+SQ I TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]

BLAST of Csor.00g256230 vs. NCBI nr
Match: XP_022928621.1 (40S ribosomal protein S25-like [Cucurbita moschata] >XP_022967929.1 40S ribosomal protein S25 [Cucurbita maxima] >XP_023543611.1 40S ribosomal protein S25-like [Cucurbita pepo subsp. pepo] >KAG6603251.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204 bits (518), Expect = 7.70e-66
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. NCBI nr
Match: XP_008391134.1 (40S ribosomal protein S25-like [Malus domestica] >XP_028955746.1 40S ribosomal protein S25-like [Malus domestica] >KAB2619834.1 40S ribosomal protein S25-like [Pyrus ussuriensis x Pyrus communis] >RXH83406.1 hypothetical protein DVH24_005659 [Malus domestica] >RXI04825.1 hypothetical protein DVH24_039099 [Malus domestica] >RXI09942.1 hypothetical protein DVH24_018971 [Malus domestica])

HSP 1 Score: 199 bits (505), Expect = 7.40e-64
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           ITPSILSDRLRINGSLARRAIKDLMARGSIRL++AHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLIAAHASQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. NCBI nr
Match: XP_008456601.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S ribosomal protein S25-2-like [Momordica charantia] >TYK11764.1 40S ribosomal protein S25-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (502), Expect = 2.12e-63
Identity = 102/108 (94.44%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           +TPSILSDRLRINGSLARRAIKDLMARGSIR++SAH+SQ IYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. NCBI nr
Match: KAG9440264.1 (hypothetical protein H6P81_020429 [Aristolochia fimbriata])

HSP 1 Score: 197 bits (502), Expect = 2.12e-63
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           ITPSILSDRLRINGSLARRAIKDLM+RGSIRLVSAHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMSRGSIRLVSAHASQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. NCBI nr
Match: XP_038885543.1 (40S ribosomal protein S25 [Benincasa hispida])

HSP 1 Score: 197 bits (500), Expect = 4.29e-63
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           +TPSILSDRLRINGSLARRAIKDLMARGSIR++SAH SQ IYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHPSQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. ExPASy TrEMBL
Match: A0A6J1HY46 (40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467295 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 3.73e-66
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. ExPASy TrEMBL
Match: A0A6J1EKT2 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111435474 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 3.73e-66
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. ExPASy TrEMBL
Match: A0A498IJ67 (40S ribosomal protein S25 OS=Malus domestica OX=3750 GN=DVH24_005659 PE=3 SV=1)

HSP 1 Score: 199 bits (505), Expect = 3.58e-64
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           ITPSILSDRLRINGSLARRAIKDLMARGSIRL++AHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLIAAHASQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. ExPASy TrEMBL
Match: A0A5N5H9J7 (40S ribosomal protein S25 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_040484 PE=3 SV=1)

HSP 1 Score: 199 bits (505), Expect = 3.58e-64
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           ITPSILSDRLRINGSLARRAIKDLMARGSIRL++AHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLIAAHASQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. ExPASy TrEMBL
Match: A0A5B7BSZ6 (40S ribosomal protein S25 OS=Davidia involucrata OX=16924 GN=Din_041531 PE=3 SV=1)

HSP 1 Score: 198 bits (503), Expect = 7.24e-64
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108
           ITPSILSDRLRINGSLARRAIKDLMARGSIR+VSAHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+VSAH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-45
Identity = 94/107 (87.85%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATN 108
           ITPSILSDRLRINGSLARRAI++LMA+G+IR+VSAH+SQ IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of Csor.00g256230 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-45
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+V+AH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of Csor.00g256230 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-44
Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQG+YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+VSAH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

[Close]

BLAST of Csor.00g256230 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-43
Identity = 92/108 (85.19%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ +YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+V+AH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:

BLAST of Csor.00g256230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIK2	3.2e-45	87.96	40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1	[more]
P46301	5.4e-45	88.89	40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1	[more]
Q8GYL5	2.0e-44	87.85	40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2	[more]
Q9T029	3.5e-44	86.11	40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1	[more]
Q9SIW5	3.3e-42	84.91	40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3	[more]

BLAST of Csor.00g256230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928621.1	7.70e-66	100.00	40S ribosomal protein S25-like [Cucurbita moschata] >XP_022967929.1 40S ribosoma...	[more]
XP_008391134.1	7.40e-64	96.30	40S ribosomal protein S25-like [Malus domestica] >XP_028955746.1 40S ribosomal p...	[more]
XP_008456601.1	2.12e-63	94.44	PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S r...	[more]
KAG9440264.1	2.12e-63	96.30	hypothetical protein H6P81_020429 [Aristolochia fimbriata]	[more]
XP_038885543.1	4.29e-63	94.44	40S ribosomal protein S25 [Benincasa hispida]	[more]

BLAST of Csor.00g256230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY46	3.73e-66	100.00	40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467295 PE=3 SV=1	[more]
A0A6J1EKT2	3.73e-66	100.00	40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111435474 PE=3 SV=...	[more]
A0A498IJ67	3.58e-64	96.30	40S ribosomal protein S25 OS=Malus domestica OX=3750 GN=DVH24_005659 PE=3 SV=1	[more]
A0A5N5H9J7	3.58e-64	96.30	40S ribosomal protein S25 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8...	[more]
A0A5B7BSZ6	7.24e-64	96.30	40S ribosomal protein S25 OS=Davidia involucrata OX=16924 GN=Din_041531 PE=3 SV=...	[more]

BLAST of Csor.00g256230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21580.1	2.2e-46	87.96	Ribosomal protein S25 family protein	[more]
AT4G34555.1	1.5e-45	87.85	Ribosomal protein S25 family protein	[more]
AT4G39200.1	2.5e-45	86.11	Ribosomal protein S25 family protein	[more]
AT2G21580.2	1.2e-44	87.04	Ribosomal protein S25 family protein	[more]
AT4G39200.2	1.4e-43	85.19	Ribosomal protein S25 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.63.20		coord: 21..108 e-value: 2.3E-40 score: 138.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR12850:SF31	BNAA04G12260D PROTEIN	coord: 2..108
IPR004977	Ribosomal protein S25	PFAM	PF03297	Ribosomal_S25	coord: 7..105 e-value: 1.6E-41 score: 140.6
IPR004977	Ribosomal protein S25	PANTHER	PTHR12850	40S RIBOSOMAL PROTEIN S25	coord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g256230.m01	Csor.00g256230.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome