Csor.00g256180 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGAAGTTCAAGTAACAACGGGAAGGAGCCTGTCGTTACAGAATCGATCGATGTACAGACCGGAGTAACGGAGACTAAGATATTTTCAATAGAATCATCCAGCATTTCCTCCTCAAACAAGAGCTGTGAAGAAGTCCGCATGAAAGAGCGCCCGAATCGATGTGCCATGTGCAGAAAGCGCGTTGGTTTGACTGGGTTCGATTGCAAATGTGGAAATCTCTTCTGTGCTGTTCATCGTTATTCCGATAAACATAACTGTGATTTTGATTATCGCGCTGCTGCTCAGGACGCCATTGCTAAAGAAAATCCTGTTGTTAAGGCTGAGAAGCTCGATAAGATTTGA ATGAATGGAAGTTCAAGTAACAACGGGAAGGAGCCTGTCGTTACAGAATCGATCGATGTACAGACCGGAGTAACGGAGACTAAGATATTTTCAATAGAATCATCCAGCATTTCCTCCTCAAACAAGAGCTGTGAAGAAGTCCGCATGAAAGAGCGCCCGAATCGATGTGCCATGTGCAGAAAGCGCGTTGGTTTGACTGGGTTCGATTGCAAATGTGGAAATCTCTTCTGTGCTGTTCATCGTTATTCCGATAAACATAACTGTGATTTTGATTATCGCGCTGCTGCTCAGGACGCCATTGCTAAAGAAAATCCTGTTGTTAAGGCTGAGAAGCTCGATAAGATTTGA ATGAATGGAAGTTCAAGTAACAACGGGAAGGAGCCTGTCGTTACAGAATCGATCGATGTACAGACCGGAGTAACGGAGACTAAGATATTTTCAATAGAATCATCCAGCATTTCCTCCTCAAACAAGAGCTGTGAAGAAGTCCGCATGAAAGAGCGCCCGAATCGATGTGCCATGTGCAGAAAGCGCGTTGGTTTGACTGGGTTCGATTGCAAATGTGGAAATCTCTTCTGTGCTGTTCATCGTTATTCCGATAAACATAACTGTGATTTTGATTATCGCGCTGCTGCTCAGGACGCCATTGCTAAAGAAAATCCTGTTGTTAAGGCTGAGAAGCTCGATAAGATTTGA MNGSSSNNGKEPVVTESIDVQTGVTETKIFSIESSSISSSNKSCEEVRMKERPNRCAMCRKRVGLTGFDCKCGNLFCAVHRYSDKHNCDFDYRAAAQDAIAKENPVVKAEKLDKI Homology
BLAST of Csor.00g256180 vs. ExPASy Swiss-Prot
Match: A2YEZ6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SAP8 PE=2 SV=2) HSP 1 Score: 127.9 bits (320), Expect = 7.5e-29 Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy Swiss-Prot
Match: A3BDI8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP8 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 7.5e-29 Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy Swiss-Prot
Match: Q6H7P8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP4 PE=2 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 2.2e-28 Identity = 63/112 (56.25%), Postives = 81/112 (72.32%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy Swiss-Prot
Match: Q8H0X0 (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=SAP2 PE=2 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 5.0e-25 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy Swiss-Prot
Match: O76080 (AN1-type zinc finger protein 5 OS=Homo sapiens OX=9606 GN=ZFAND5 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.6e-23 Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Csor.00g256180 vs. NCBI nr
Match: KAG6603246.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 227 bits (578), Expect = 9.05e-75 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Csor.00g256180 vs. NCBI nr
Match: KAG7033549.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 224 bits (572), Expect = 5.07e-73 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of Csor.00g256180 vs. NCBI nr
Match: XP_023543602.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita pepo subsp. pepo] >XP_023543603.1 zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221 bits (562), Expect = 1.69e-71 Identity = 112/115 (97.39%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of Csor.00g256180 vs. NCBI nr
Match: XP_022967909.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita maxima]) HSP 1 Score: 216 bits (549), Expect = 1.62e-69 Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0
BLAST of Csor.00g256180 vs. NCBI nr
Match: XP_022928679.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Cucurbita moschata]) HSP 1 Score: 213 bits (541), Expect = 2.68e-68 Identity = 109/115 (94.78%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy TrEMBL
Match: A0A6J1HY28 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111467284 PE=4 SV=1) HSP 1 Score: 216 bits (549), Expect = 7.83e-70 Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy TrEMBL
Match: A0A6J1ELJ3 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111435523 PE=4 SV=1) HSP 1 Score: 213 bits (541), Expect = 1.30e-68 Identity = 109/115 (94.78%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy TrEMBL
Match: A0A6J1DFD5 (zinc finger A20 and AN1 domain-containing stress-associated protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019580 PE=4 SV=1) HSP 1 Score: 177 bits (448), Expect = 1.80e-54 Identity = 94/115 (81.74%), Postives = 99/115 (86.09%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy TrEMBL
Match: A5BFH0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g07950 PE=4 SV=1) HSP 1 Score: 160 bits (405), Expect = 6.20e-48 Identity = 82/115 (71.30%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of Csor.00g256180 vs. ExPASy TrEMBL
Match: A0A438JL90 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Vitis vinifera OX=29760 GN=SAP8_3 PE=4 SV=1) HSP 1 Score: 160 bits (405), Expect = 6.20e-48 Identity = 82/115 (71.30%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of Csor.00g256180 vs. TAIR 10
Match: AT1G51200.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Csor.00g256180 vs. TAIR 10
Match: AT1G51200.2 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Csor.00g256180 vs. TAIR 10
Match: AT1G51200.3 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Csor.00g256180 vs. TAIR 10
Match: AT1G51200.4 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of Csor.00g256180 vs. TAIR 10
Match: AT3G52800.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 99.4 bits (246), Expect = 2.0e-21 Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|