Csor.00g256130 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g256130
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein cornichon homolog 1-like isoform X1
Location	Csor_Chr03: 985459 .. 988945 (-)
RNA-Seq Expression	Csor.00g256130
Synteny	Csor.00g256130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGGTGCGTTCTTTCTAATCTCATGAACCCTAGTTTCGGAATCAACTATCTTTATGATAGATTAAGTTGCTGTTTGGTTTCCGAGAAAGTCTAAATGCGTCTGCTGAAACGTAGTCCGAATGTTCTTCTTGTTGTTGTTGTGTAATCCTGTGGTAGCTTATTCAGTAAGGAGTGGAGGTTTGATGCGTATCTGAGATTCGTTTTGCTGCGACAGAGCATTTGGACCTCAATTTGATTTACGTCTAGACGTCGCCTAGATTCTGATGATGGAACCTTTACACTTTCGCTCGACCTGAAATGGATTTATGACTTCGTTCCATTTCACCGTTTTCTCTTGCTTTCTTAACCAATCAGTAGAATAGTCAACTTTACGGTGATGAATCTTGGTCATTTCCTTTTGCATCCGAGTTTGCAATGTAATTTTACCTTGTTAAGTGTTCGTGTTCTTGTAGTCTTTAGAGACGTGGCTGTATGTATGTCTTGTGGGGATGAACGATAATAAATGTATTTCAACTAGAAAACTGACTAATATTATTCTAGTTGATACCTTGTTTCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGAAATAAAATTGGTCCCAATGTTCCTGCGGGTTATTTCTGGGTCATCAGTTGATTGTTGGCTATGCTCCCATTTCATTTAATACGTTCATGTACAATGGCAGGAGGAGAGAAGTGACTGCTCTTATTTTCTATGAACTATGATAATTTCTTCTTGTTATTGCTTTATATGTTCTTTATGAACTTGATGACTATTTAGAGTTTCCATTTATAGATCAATATCACTAGCCATTGTAAAGAGTACTATTAATTGTCTAGGAACATTTGTACTTCATGTTGGAAGCATCTAATGGTTGTGGTTGGTCTTTTTGTAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTAGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTAAGTATTTCTTGACATTAATATGAGGCATGATTTATTTTTCCTTATGCTTTGTGTAATGTATGAGGTATAATGCTGGTGTTTCTTTGTTATGTATGATACCCCTTTATTGTCTAAAGTGTTATGGATGCCAATATGAATATAACTCAATGAGTTGAAGACATTTTACTCTCGATCAAGAGGTCAGAGGTTTGAATTCCTCCACCCTCACGTTTTTGTACTCTCTAAGGTGTTATAGATGAGGCTTATGATGTTCTTTACTTGTAAAGCGGATCTAGCTTGCACTCATATTTATATACTTTTTTCTTTTGTCATGGAAAAAAGATTATATATACTTCTTAATGTGTCAATATGTTTTGTTTTATTATTAAGCACAGTATTCTTAGAGATGCAAACATGTGAAAGCTAGTTGGAAGGCTTAAGAACATCAAATAGTTTCTCTCTGAAGTTGAGATGGTCATTTCTAGAATGATTGAACTGTAGATAGCTATAATTGTCAAATTAACTTTTGGTAATAGTTCTCCCTCTGTATGAGGGATTAGTGCATTTCGGCATTTTCTGATGCTTTTGGGGAGTATTAGAGCCAGGAGGAGCTTATAATTTTAGATAATCAATGATTAGTGTTTCTGGTGGCACAATGAGCTCATAAGCTGAGATTTACAGTTCATAATTTCAATTTTATCTGGTCTATGGCTCCTGCTGGTATGGTTTTTAAATTGATTTTCATCGTCTCCCTTTATTGGGCTGCTTCCATGTTTTTCAATATGAAAAATGAGGAAAAGCAGTTGTTAGATCCCTCAAGCAAATGTTAATGACTTATGTGGAGTACTCTCTATTGTAGTGTTCTCTCTGTACTTATTTTGTTTTGAACTAACTTCTAAAGTTGAGTATCTAGCGACTTGGGTGGTATAGCCACCTCTTTGGCAGTAAGCGTGAAGAAAAGATTTACGAGATAAATGTCCTGACTCAAGCAACTAAAATCTAGAATCGATTAGGCTAAACGATATCCAACTTGGTTGGAATGGATAACCATTCGTCCACATCTTTGTCATGGTAATACCTTTTGAAATTGAGCATTCACTCACCTAGATCATAACGAGTTGATGATTGCATATTGAACGGATCTTATTGACTAAAGCACTGAAAGTAAACATATATATATTTTTTGCATATATTACTTTTTCATCAATAGAAAATGAAGCTAGGATTTTTGCTATTCTTAAAAGATAAAGGTATAGAAAAGAACGTTGATGCTAGCCAAGACTAAGTACCAATGTATAACTAAACTAGGCTTGGATAGAATAGTGGTTTACAACTATGATGTTTGACGACGAATAAAAGAGATATGAGTAGATATATAGAAAATAGAAGATCAACTAAGTATCGCACTCTTGGAGATTGTGAACAATACAATGGAAAATTTTGTTGCACCACACCAATGTACGAAGAAATATAAATAAATACAGATGGTTTAACAGTTAAATGACAACTTGTGTAATTTCATTCTGATTAAGGGAGTAGCGCATGCTTGTTTTTGGATACTTTTGTTGTAATTACTATCAACTACCAAAAGGACTCTATATTCGAGATTCTTGATGAACCAATTATCCTGGTGCCATTGTTGCTTTGTTCTTTTTTTTCTAAACATTCTTATTCCATGTAGCTATTCCAGTAATATACTGAAATTTAATTCCATTAGATATGTTCTCCGTCGACTGAATTACACCACTTATTGTTTGAATCTTAGATGCTTTAAATAAGTATAATTGATTTTCAGTGGTGGCTTGAAACTAATGCCTTCTTAAAGAATAAAACTAGAGTTTTCAAATGTATGATATCCTATTGTTTGAGGATCCTGCAAATATGTTTTTAATAGATTCTCAGTGATGGATAGACGTCTACTGCTGGTATTTTTTAGAAATAAAACTAAAATTTTCTAGATGAAAGTTTCTATTCCACTAGTTGGACCGAGAATTTTCAAGCATTTCCCCGTTTTTGTGTGTATATGATGTATATTATCCGATTACAATGTCCCAGGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGGTAAGTCTGCAATTTCATTGTTTCTCTCCTCTTAACTATTTAGAAAGTGGTATCCTTTCTGATTGAAGTTTCCTTGTTTTCTGTATAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAG

mRNA sequence

ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTAGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAG

Coding sequence (CDS)

ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTAGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAG

Protein sequence

MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF

Homology

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BLAST of Csor.00g256130 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-33
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAW+L  W +SF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEF++QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           C LFL T HW  FL+ VPV+ YH  L+ ++ +LIDVTEVFR +  EK  R  KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDD 145
           F++V+FR+ + A    V+    DD
Sbjct: 121 FIMVVFRLTLSA----VYSFTEDD 140

[Close]

BLAST of Csor.00g256130 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-25
Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFT 67
           W ISF   +AL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFR 127
           GHWFM L+ +P   Y+ +L+ K++HL+DVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 IIMVA 133
           +I  A
Sbjct: 127 MIYSA 131

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BLAST of Csor.00g256130 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFT 67
           W ISF I + LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFR 127
           GHWFM L+ VP   Y+ +L+ +K+HLIDVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 II 130
           +I
Sbjct: 127 LI 128

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BLAST of Csor.00g256130 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 5.4e-22
Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 133
              Y+ +L+ K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of Csor.00g256130 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-20
Identity = 54/126 (42.86%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 4   NLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSL 63
           +L+ W ISF     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QG+ C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLV 123
           ++ TGHWFM ++++P   Y+I L++K+EHL DVTE++ T K E+  R+ K+    L   +
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRII 130
             + +I
Sbjct: 123 TTYWLI 128

[Close]

BLAST of Csor.00g256130 vs. NCBI nr
Match: XP_022928680.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 Protein cornichon-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295 bits (754), Expect = 2.38e-100
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. NCBI nr
Match: XP_022967916.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 293 bits (751), Expect = 6.83e-100
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. NCBI nr
Match: KAG7033543.1 (Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293 bits (750), Expect = 9.70e-100
Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF++QGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. NCBI nr
Match: XP_023543605.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293 bits (749), Expect = 1.38e-99
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAW+LIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF
Sbjct: 1   MAWDLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. NCBI nr
Match: XP_022925064.1 (protein cornichon homolog 1-like isoform X2 [Cucurbita moschata] >XP_022966480.1 protein cornichon homolog 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 284 bits (726), Expect = 4.43e-96
Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAW+LIFWF+SFCIN+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEF+VQG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+TLKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. ExPASy TrEMBL
Match: A0A6J1ESA6 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435524 PE=3 SV=1)

HSP 1 Score: 295 bits (754), Expect = 1.15e-100
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. ExPASy TrEMBL
Match: A0A6J1HTE7 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467288 PE=3 SV=1)

HSP 1 Score: 293 bits (751), Expect = 3.31e-100
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. ExPASy TrEMBL
Match: A0A6J1HRR4 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466123 PE=3 SV=1)

HSP 1 Score: 284 bits (726), Expect = 2.15e-96
Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAW+LIFWF+SFCIN+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEF+VQG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+TLKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. ExPASy TrEMBL
Match: A0A6J1EB17 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432423 PE=3 SV=1)

HSP 1 Score: 284 bits (726), Expect = 2.15e-96
Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAW+LIFWF+SFCIN+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEF+VQG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+TLKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FLVVIFRIIMVAGMKSVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of Csor.00g256130 vs. ExPASy TrEMBL
Match: A0A1S3B5Z0 (protein cornichon homolog 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486176 PE=3 SV=1)

HSP 1 Score: 279 bits (713), Expect = 2.06e-94
Identity = 142/154 (92.21%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAWNLIFWFISFC N+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVLPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPV+CYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154
           FL+VIFRIIMVA MKSVFDSAP+DIDIRS+VLE+
Sbjct: 121 FLIVIFRIIMVAEMKSVFDSAPEDIDIRSSVLEY 154

[Close]

BLAST of Csor.00g256130 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 141.4 bits (355), Expect = 6.3e-34
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60
           MAW+L  W +SF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEF++QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           C LFL T HW  FL+ VPV+ YH  L+ ++ +LIDVTEVFR +  EK  R  KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDD 145
           F++V+FR+ + A    V+    DD
Sbjct: 121 FIMVVFRLTLSA----VYSFTEDD 140

[Close]

BLAST of Csor.00g256130 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26
Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFT 67
           W ISF   +AL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFR 127
           GHWFM L+ +P   Y+ +L+ K++HL+DVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 IIMVA 133
           +I  A
Sbjct: 127 MIYSA 131

[Close]

BLAST of Csor.00g256130 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFT 67
           W ISF I + LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFR 127
           GHWFM L+ VP   Y+ +L+ +K+HLIDVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 II 130
           +I
Sbjct: 127 LI 128

[Close]

BLAST of Csor.00g256130 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-23
Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 133
              Y+ +L+ K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of Csor.00g256130 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21
Identity = 54/126 (42.86%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 4   NLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSL 63
           +L+ W ISF     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QG+ C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLV 123
           ++ TGHWFM ++++P   Y+I L++K+EHL DVTE++ T K E+  R+ K+    L   +
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRII 130
             + +I
Sbjct: 123 TTYWLI 128

The following BLAST results are available for this feature:

BLAST of Csor.00g256130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7D7	8.8e-33	51.39	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]
Q84W04	2.3e-25	50.40	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	1.5e-24	51.64	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	5.4e-22	49.12	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	1.7e-20	42.86	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]

BLAST of Csor.00g256130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928680.1	2.38e-100	100.00	protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 P...	[more]
XP_022967916.1	6.83e-100	99.35	protein cornichon homolog 1-like isoform X1 [Cucurbita maxima]	[more]
KAG7033543.1	9.70e-100	98.70	Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023543605.1	1.38e-99	99.35	protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022925064.1	4.43e-96	93.51	protein cornichon homolog 1-like isoform X2 [Cucurbita moschata] >XP_022966480.1...	[more]

BLAST of Csor.00g256130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESA6	1.15e-100	100.00	protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HTE7	3.31e-100	99.35	protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1HRR4	2.15e-96	93.51	protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EB17	2.15e-96	93.51	protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A1S3B5Z0	2.06e-94	92.21	protein cornichon homolog 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486176 P...	[more]

BLAST of Csor.00g256130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12180.1	6.3e-34	51.39	Cornichon family protein	[more]
AT1G12390.1	1.7e-26	50.40	Cornichon family protein	[more]
AT1G62880.1	1.1e-25	51.64	Cornichon family protein	[more]
AT1G12340.1	3.8e-23	49.12	Cornichon family protein	[more]
AT4G12090.1	1.2e-21	42.86	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 5..126 e-value: 6.7E-52 score: 188.4
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 6..126 e-value: 9.6E-39 score: 132.5
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..131
None	No IPR available	PANTHER	PTHR12290:SF11	PROTEIN CORNICHON	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g256130.m01	Csor.00g256130.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane