Csor.00g256110 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g256110
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionAcetate kinase
LocationCsor_Chr03: 967767 .. 968102 (-)
RNA-Seq ExpressionCsor.00g256110
SyntenyCsor.00g256110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATACCAGCAGTCCCCGCTAAAGAACAATGGGAGCCGATTTTGGATGCCGGAAGCGATCCATACTTTGAAGCGATGGGAAAGTTTGCATTCGACCATGCACCACACGGTCTTGGGGTACAAAGAAGGTTTCATAGTGTGGTAATCGTGGAGTATAAAGTGGTGGATGGAGTAGGAAAGAAATACCGACTTTGTTTGAAGTTGGTGGAGAATGTAGTGGCGCCACATTCTAAAAAATATGAAAGGCTTTATGTGGCTATTGTGCTACAAAAGGATGATCAATCTAGAGAACTCGTATCGTTTGACCTTGTCGACCTTTGGCCCCACGCGTAG

mRNA sequence

ATGAGTATACCAGCAGTCCCCGCTAAAGAACAATGGGAGCCGATTTTGGATGCCGGAAGCGATCCATACTTTGAAGCGATGGGAAAGTTTGCATTCGACCATGCACCACACGGTCTTGGGGTACAAAGAAGGTTTCATAGTGTGGTAATCGTGGAGTATAAAGTGGTGGATGGAGTAGGAAAGAAATACCGACTTTGTTTGAAGTTGGTGGAGAATGTAGTGGCGCCACATTCTAAAAAATATGAAAGGCTTTATGTGGCTATTGTGCTACAAAAGGATGATCAATCTAGAGAACTCGTATCGTTTGACCTTGTCGACCTTTGGCCCCACGCGTAG

Coding sequence (CDS)

ATGAGTATACCAGCAGTCCCCGCTAAAGAACAATGGGAGCCGATTTTGGATGCCGGAAGCGATCCATACTTTGAAGCGATGGGAAAGTTTGCATTCGACCATGCACCACACGGTCTTGGGGTACAAAGAAGGTTTCATAGTGTGGTAATCGTGGAGTATAAAGTGGTGGATGGAGTAGGAAAGAAATACCGACTTTGTTTGAAGTTGGTGGAGAATGTAGTGGCGCCACATTCTAAAAAATATGAAAGGCTTTATGTGGCTATTGTGCTACAAAAGGATGATCAATCTAGAGAACTCGTATCGTTTGACCTTGTCGACCTTTGGCCCCACGCGTAG

Protein sequence

MSIPAVPAKEQWEPILDAGSDPYFEAMGKFAFDHAPHGLGVQRRFHSVVIVEYKVVDGVGKKYRLCLKLVENVVAPHSKKYERLYVAIVLQKDDQSRELVSFDLVDLWPHA
Homology
BLAST of Csor.00g256110 vs. NCBI nr
Match: KAG6603239.1 (hypothetical protein SDJN03_03848, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230 bits (587), Expect = 2.85e-76
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 1   MSIPAVPAKEQWEPILDAGSDPYFEAMGKFAFDHAPHGLGVQRRFHSVVIVEYKVVDGVG 60
           MSIPAVPAKEQWEPILDAGSDPYFEAMGKFAFDHAPHGLGVQRRFHSVVIVEYKVVDGVG
Sbjct: 1   MSIPAVPAKEQWEPILDAGSDPYFEAMGKFAFDHAPHGLGVQRRFHSVVIVEYKVVDGVG 60

Query: 61  KKYRLCLKLVENVVAPHSKKYERLYVAIVLQKDDQSRELVSFDLVDLWPHA 111
           KKYRLCLKLVENVVAPHSKKYERLYVAIVLQKDDQSRELVSFDLVDLWPHA
Sbjct: 61  KKYRLCLKLVENVVAPHSKKYERLYVAIVLQKDDQSRELVSFDLVDLWPHA 111

BLAST of Csor.00g256110 vs. NCBI nr
Match: KGN53820.1 (hypothetical protein Csa_014847 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 5.05e-08
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0

Query: 9   KEQWEPILDAGSDPYFEAMGKFAFDHAPHGL-GVQRRFHSVVIVEYKVVDGVGKKYRLCL 68
           +E  + I +   + Y +AMGKFA +   H + G++R+F SV       V   G KY L +
Sbjct: 14  REDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLV 73

Query: 69  KLVENVVAPHSKKYERLYVAIVLQ-KDDQSRELVSFDLV 105
           K+ E ++AP   KYE+LY+A VL  K + S  L+ F+ V
Sbjct: 74  KVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENV 112

BLAST of Csor.00g256110 vs. NCBI nr
Match: XP_023543511.1 (cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 54.3 bits (129), Expect = 1.60e-06
Identity = 41/98 (41.84%), Postives = 54/98 (55.10%), Query Frame = 0

Query: 7   PAKEQWEPILDAGSDPYFEAMGKFAFDHAPHGL-GVQRRFHSVVIVEYKVVDGVGKKYRL 66
           P    WEP+     DPY + +G+FA     HGL GV   F  VV  E K+V   GKKY L
Sbjct: 18  PKSCDWEPVNV--HDPYVQELGRFAVMEHVHGLCGVGMTFVRVVSGESKMVCE-GKKYSL 77

Query: 67  CLKLVENVVAPHSKKYERLYVAIVLQKD-DQSRELVSF 102
            +++ E +V PH     +LYVA VL K   +S EL++F
Sbjct: 78  VVEVKEVLVLPHQCPAIKLYVAEVLDKQCAKSWELLAF 112

BLAST of Csor.00g256110 vs. NCBI nr
Match: KAG6590493.1 (hypothetical protein SDJN03_15916, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 52.0 bits (123), Expect = 1.04e-05
Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 12  WEPILDAGSDPYFEAMGKFAFDHAPHGL-GVQRRFHSVVIVEYKVVDGVGKKYRLCLKLV 71
           WE I +   DPY + MG+FA     HGL G +  F  VV  E  VV   GK YRL +K+ 
Sbjct: 23  WELIKNK-DDPYVQEMGRFAVMEHVHGLVGAKWSFVGVVSCESLVVPK-GKLYRLLIKVD 82

Query: 72  ENVVAPHSKKYERLYVAIVLQKD-DQSRELVSFDLV 105
             +V P       +Y AIVL K+ ++S EL+SF  V
Sbjct: 83  IEIVVPCHPHAIEVYEAIVLDKECERSWELMSFKRV 116

BLAST of Csor.00g256110 vs. NCBI nr
Match: KAE8649343.1 (hypothetical protein Csa_014384 [Cucumis sativus])

HSP 1 Score: 51.6 bits (122), Expect = 1.67e-05
Identity = 33/97 (34.02%), Postives = 54/97 (55.67%), Query Frame = 0

Query: 9   KEQWEPILDAGSDPYFEAMGKFAFDHAPH-GLGVQRRFHSVVIVEYKVVDGVGKKYRLCL 68
           +E  + I +   + Y +AMG+FA +   H   G++R+F SV       V    +KY L +
Sbjct: 13  QEDCKQISNVEYNSYLQAMGRFAVEEYTHYNKGIKRKFISVGFAVVCSVSVGEEKYHLLV 72

Query: 69  KLVENVVAPHSKKYERLYVAIVLQKD-DQSRELVSFD 103
           K+ E ++AP   K+E++YVA VL K  + S  L+ F+
Sbjct: 73  KVDEFILAPSVPKFEKVYVATVLHKKVNHSWALLRFE 109

BLAST of Csor.00g256110 vs. ExPASy TrEMBL
Match: A0A0A0KW14 (Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.45e-08
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0

Query: 9   KEQWEPILDAGSDPYFEAMGKFAFDHAPHGL-GVQRRFHSVVIVEYKVVDGVGKKYRLCL 68
           +E  + I +   + Y +AMGKFA +   H + G++R+F SV       V   G KY L +
Sbjct: 14  REDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFISVGFAVVCSVPVGGDKYHLLV 73

Query: 69  KLVENVVAPHSKKYERLYVAIVLQ-KDDQSRELVSFDLV 105
           K+ E ++AP   KYE+LY+A VL  K + S  L+ F+ V
Sbjct: 74  KVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRFENV 112

BLAST of Csor.00g256110 vs. ExPASy TrEMBL
Match: A0A6J1GCT2 (uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC111453027 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.33e-05
Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 0

Query: 7   PAKEQWEPILDAGSDPYFEAMGKFAFDHAPHGL-GVQRRFHSVVIVEYKVVDGVGKKYRL 66
           P    WEP+     D Y + +G+FA     HGL GV   F  VV  E K+V   GKKY L
Sbjct: 18  PKSCDWEPVNV--HDQYVQELGRFAVMEHVHGLCGVGMTFICVVSGESKMVCE-GKKYSL 77

Query: 67  CLKLVENVVAPHSKKYERLYVAIVLQKD-DQSRELVSF 102
            +++ E  V PH+    +LYVA VL K   +S EL++F
Sbjct: 78  VVEVKEVPVLPHACPAIKLYVADVLDKQCAKSWELLAF 112

BLAST of Csor.00g256110 vs. ExPASy TrEMBL
Match: A0A6J1BU61 (cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005388 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.56e-05
Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 0

Query: 12  WEPILDAGSDPYFEAMGKFAFDHAPHGL-GVQRRFHSVVIVEYKVVDGVGKKYRLCLKLV 71
           WEPI +  +DPY + +G+FA     H L G    F  VV  E +VV G  KKY L +++ 
Sbjct: 25  WEPIKNI-NDPYVQELGRFAVMEHTHNLCGASYEFIRVVSGESQVVGG--KKYCLVIEVK 84

Query: 72  ENVVAPHSKKYERLYVAIVLQKD-DQSRELVSF 102
           E ++ P      + + AI+L K  ++S  L+SF
Sbjct: 85  ETIIIPSMPSSIKFFKAIMLDKAWEKSWALLSF 114

BLAST of Csor.00g256110 vs. ExPASy TrEMBL
Match: A0A6J1BX23 (cysteine proteinase inhibitor 5-like OS=Momordica charantia OX=3673 GN=LOC111005501 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.07e-04
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 0

Query: 12  WEPILDAGSDPYFEAMGKFAFDHAPH--GLGVQRRFHSVVIVEYKVVDGVGKKYRLCL-- 71
           WEPI +   DPY + MG+FA    P   GL     F  VV  E ++V   GK+YRL +  
Sbjct: 54  WEPIKNI-KDPYVQEMGRFAVMEQPKPVGLVASMEFVGVVSGEIQLVAA-GKEYRLVVEV 113

Query: 72  KLVENVVA---PHSKKYERLYVAIVLQK-DDQSRELVSFDLVDL 107
           K+ E ++    P S    RLYVA+VL K  D+S +++SF  ++L
Sbjct: 114 KVTEKIIVHGCPVSSI--RLYVAVVLDKPSDKSWKVLSFAPLEL 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6603239.12.85e-76100.00hypothetical protein SDJN03_03848, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN53820.15.05e-0837.37hypothetical protein Csa_014847 [Cucumis sativus][more]
XP_023543511.11.60e-0641.84cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo][more]
KAG6590493.11.04e-0541.67hypothetical protein SDJN03_15916, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8649343.11.67e-0534.02hypothetical protein Csa_014384 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0KW142.45e-0837.37Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1[more]
A0A6J1GCT22.33e-0540.82uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC1114530... [more]
A0A6J1BU615.56e-0536.56cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1BX231.07e-0439.42cysteine proteinase inhibitor 5-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 7..105
e-value: 9.9E-9
score: 37.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g256110.m01Csor.00g256110.m01mRNA