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Csor.00g256000 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGGTCAATTCCGGCCGCCGATGGCGGTGGTTTAGGAGATGTCACCTTATTCAGTTCCGGTGGGTTACTTTTGCTTGCAACCGTTCTTCTGTCTCTCTCTCTCGTATCGATGATCATATTTGCCTGCGGTGATAGCTCGAGTGACAACAAAAGAAAAAGAAATGGCGGAGGCTGCGGTGGAGGAGGCGGCGGAGGTTGTGGTGGCGATGTGGGTGGTGGTGGAGGTTGTGGCGGAGGAGGCGGAGGTTGTGGTGGCGTTGCGGGTGGTGGTGGAGGTTGTGGCGGAGGAGGCGGAGGATCTGCATGTTAA ATGGGAAGGTCAATTCCGGCCGCCGATGGCGGTGGTTTAGGAGATGTCACCTTATTCAGTTCCGGTGGGTTACTTTTGCTTGCAACCGTTCTTCTGTCTCTCTCTCTCGTATCGATGATCATATTTGCCTGCGGTGATAGCTCGAGTGACAACAAAAGAAAAAGAAATGGCGGAGGCTGCGGTGGAGGAGGCGGCGGAGGTTGTGGTGGCGATGTGGGTGGTGGTGGAGGTTGTGGCGGAGGAGGCGGAGGTTGTGGTGGCGTTGCGGGTGGTGGTGGAGGTTGTGGCGGAGGAGGCGGAGGATCTGCATGTTAA ATGGGAAGGTCAATTCCGGCCGCCGATGGCGGTGGTTTAGGAGATGTCACCTTATTCAGTTCCGGTGGGTTACTTTTGCTTGCAACCGTTCTTCTGTCTCTCTCTCTCGTATCGATGATCATATTTGCCTGCGGTGATAGCTCGAGTGACAACAAAAGAAAAAGAAATGGCGGAGGCTGCGGTGGAGGAGGCGGCGGAGGTTGTGGTGGCGATGTGGGTGGTGGTGGAGGTTGTGGCGGAGGAGGCGGAGGTTGTGGTGGCGTTGCGGGTGGTGGTGGAGGTTGTGGCGGAGGAGGCGGAGGATCTGCATGTTAA MGRSIPAADGGGLGDVTLFSSGGLLLLATVLLSLSLVSMIIFACGDSSSDNKRKRNGGGCGGGGGGGCGGDVGGGGGCGGGGGGCGGVAGGGGGCGGGGGGSAC Homology
BLAST of Csor.00g256000 vs. NCBI nr
Match: KAG6603228.1 (hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155 bits (391), Expect = 1.34e-46 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Csor.00g256000 vs. NCBI nr
Match: KAG6603229.1 (hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 104 bits (260), Expect = 5.22e-27 Identity = 63/71 (88.73%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Csor.00g256000 vs. NCBI nr
Match: KAG6604774.1 (hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.6 bits (187), Expect = 7.70e-16 Identity = 56/79 (70.89%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Csor.00g256000 vs. NCBI nr
Match: KAG5234987.1 (hypothetical protein IMY05_011G0037600 [Salix suchowensis]) HSP 1 Score: 66.6 bits (161), Expect = 1.64e-11 Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 0
BLAST of Csor.00g256000 vs. NCBI nr
Match: KAB2611902.1 (loricrin-like [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 63.5 bits (153), Expect = 1.96e-10 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Csor.00g256000 vs. ExPASy TrEMBL
Match: A0A5N5GEI7 (Loricrin-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019934 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 9.50e-11 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Csor.00g256000 vs. ExPASy TrEMBL
Match: A0A5D2J8B2 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G250900v1 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.56e-10 Identity = 62/105 (59.05%), Postives = 72/105 (68.57%), Query Frame = 0
BLAST of Csor.00g256000 vs. ExPASy TrEMBL
Match: A0A5J5PUG6 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D10G231700v1 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.88e-10 Identity = 65/106 (61.32%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of Csor.00g256000 vs. ExPASy TrEMBL
Match: A0A5D2B4S7 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D10G249800v1 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.88e-10 Identity = 65/106 (61.32%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of Csor.00g256000 vs. ExPASy TrEMBL
Match: A0A5N5GBC1 (Loricrin-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_034934 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.05e-09 Identity = 58/107 (54.21%), Postives = 66/107 (61.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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