Csor.00g255860 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g255860
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	exosome complex component RRP43
Location	Csor_Chr03: 719513 .. 731002 (+)
RNA-Seq Expression	Csor.00g255860
Synteny	Csor.00g255860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGAAGACTCTTTCCAATTCAGTTTTTTGAGCGTCATCTCGCTGAATCAATACGTCCTGATGGAAGAGCACTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGTTAGTTGTAAGCTTGGATTTTGAGAAAATTGCCATTTCTTACCATTTCCAGCTTTTGTTTATCATCTCGAGTTTGCTCGATTCATTTTGACTCTCAAAACTGAATTTGGGTATTGTCTATTCATTTTGACTCTCAAAACTGAATTTGGGTATTGTCTATTCATTTAAGGACCAGTATCATCTGCGAACGGATCAGCCCTGGCTAAGGTTGGTTCTACGGTAAGTGCCTTCACATTTAACCTTTTCATATGTGCTGGGATTTTGTGACGGTTTATTCTTAATTTTATATAGTGCAGACAATGTTGGCTGCTATTAAAATGGAGGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGCATAGGTTTGTCATTGTCAACAGCTAGATATTTTTGCTCCTTGTTTATCATAAACCTTATGATAACATGCTATACATCTTTGTGATATTGGGTCTATCTTTTTCCAGCTGTCGAATTCCACATGCCCCCCATATGCTCTCCAATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGGTACTATTTCACATTTCTTGCAGTTCTACTTTGATCTATTGCAATTTGCAGATGATATTTTTCTGTTAAGTGTGGATGGAAATCAAGCTTTAAAAAGTATTTTGAATGCTATTGAAGTGTTTGAGATGCCTTTTCTCACTTTAAATTTAGAGAAAAGAGAGATTTTGTATGAAGGGTCTCAATAATCTTAGTTAAACACAGCAGCAGGATTTATGCAAGGAATCGTGGCAAGCCTTGAGGCAGTTTCAAACATGATCTGCACTACAAGATTCAGGCTAGTGGGAAAATTATAACAGAAGAACTAACCCCACTAACTCAGAAAATAATAAATTCAATGAACAAATATAAAGCACAAGGCTGGACAATGAATGCTGTCTTTGCAGTTAATTGAACGACGCTGAAGTCTGATCTGATGAAGCTAGTGTAACGGTACCATTTGGGCTGAGATTCTAACATTCTCCTGTGGAGTGGGCGCTCTTGGACCAAACTTGGAAATGCCTCTTTGGGGAATCTGACTTTTAAGGACTCCTGGAAATGAATCATAGATAAATCCAGGTGCAATAATTCAATATGGAAGAATTTATTTCTCTCTTGGTGTGGAATATTATCTCTTGTTCAATCGGTACCCTCTATTATTCCCCAACATCGTGTTTTTCTTTTCAGAATGCCTTCCAATATTGCTGATATTCTATAAAAGATCATTAGAGACTTTTTAGACAGCAGTGACAGGGTAAAGGAAACCATTTGGTAAATTGGAAAATAACTTGCCTCCCTTTTGCCCCTGGTGACTCGTGGATTTGAAACTAGAGAAGTAGAAATATTTACCATAAGAGAGGGAGGCTCTTTGGACAGTATAAAATTGTGATGAGAGACTATGACCCCTTCATAATTGGGGTTGGAGAGAAAGTGATTTAAGTATAAACTATAAAAACATCTCTCATGCTGTTTACTAAACAAACAAGGCTCTTTTGGGGAGCAAAATGACACACTTCGGACCTCTGCTGGACCCCTTTCGCCTTTATTCCTGCTAACAGCAAAGGCAAGACTCTTTTGCAAGGCTAGAATGGTGAACAAAACTATTGGTTACTCAACATGAAAGAGAAGTTCAGAGACACTGAAGTAGAAGAGCGGATATCCCTTATGGATGTTCTGGTTCGTGTGGTTCTTAGGGAGGGGATGATATTTTGCAATGTTCTCTTGATGGGTCATTAAGCTACTTCACTTTTCATTTTTTTTTTTGGGAAAAAAAATTAATTTCAACCCTCAACTCTAAAAATTGTTAATGCATAATTTTCACGTGTAAACTACTTTAGATGCATGATAAGTTCTCTGTCTTCATTTTAAATTTTCTTAAAGGACTTACCTATTGCAAACTATTCTGCATGCGATATTGTGTTTCTCATTATTTTAGAAGTGATAGAAATCTGGCAAGAGGAATGCAATACACTTTTTTGATTTCTGCAATTTCCTTCAAATCTTTCTAACTAATCAAGAAACTGATGATGTGAATTCTTTAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGCGTGGATGGCATACTTGGTATGTATTTTAAAGTCATGCATTGTCAATGTATTTTTATGCTAGAAGTATCTTAGTGTTTGAAGTGAGGTGCCTTTACCGATGTACCTGTATACTTTGCTTCTGAAATTTGTTCACTTGCATCATCCTTACTCTTATTGGACATTTTGTCTCTATAGCCTGATTTTTGGTCAGAATGCAGCTTTATTATTGTGGTTAATTATTTTAAATGAAATAGCAACTTGATATGCATTCCACAGGATATTTACTGTTTGGATGCCGACGGATCTCTATTCGATGCTGCACTTCTTTCTCTAGCTGCTGCATTTTCTCACTGTGAGGTTTCAGGCTCTCAACTTGTTCATAACTTGATATATTTCTGCATAATTTTGTAGGTGTTATGGTTATGGCAGTAATGCTGGTTATAATGGGACATTTGTCCTCCACTAACATTAAGGATAGTTTTTCAGATCATAGATTGATACTTTCTGCTTTTAATCCTTTACATTTCAGATTTTTTTCCCTCTTTAGATTTCGTTTGTTGTTATTAAAATCTATAGGGGGCATTAAGTAATCATGTCCTGAAGTAAACTACCATATTATCAAGAGGAGGTCGTTTTGATGCTTGTAATTTGGTGTTTTCTTGTATTTCATTGTATTATATGTATCTTTTCCTTAGGCCTTTGCAAGTTGTCTCTTTTCCTTATGCCTTCACAAGTGAGTTTGGATTCGGAACGTATGATGATAATTTTTTTTTTTTTTTTTGGGAAGGGATGAGGGTGGTACAATCAACCAATTGGTTAGATGGAACTTAGTGTCACTAAATCTCAAGATGATGGAGGTCTAGGAATTGGAGCTTTAAAATGAAGAAATACGGCACTCATTCTCAAGTGGGGTTGGAGATTTATAAATGAACCTCGATCCTTTTGGAGAAAGGTGATTGTTAGTATACATGGGTATAACTCCTTTGGTTGGAATACGGCTGGAAGAAATTGGATGAGTTTTAAGAACCCTTGGATTAGTATTCCTAAAGTTTGGAAGCAGGTGGATTCTCTGTGAAATCTTTGTCTAAGCATTTAGGAGCTTTTTCACCTTTACGAAAGGAGATTTTTGTGGCTTTATGGAAATCCAATGTACCAAGAGAATAAACATCCTTATATGGATTATCTTACTAGGCAATCTTAATAATACTTTCAGTGCTTCATCAAAAAAGTTTTCCTTAATCATCTCTCATGCCTTCTGTGTTTGCCCGATATGTTGCCTTAACCATGTGTTTTTGTTTTTATTTTTATTTTAGTTACTCTCAGTTTTGTTAACAAATGTTTGATACTTGTCTGACATGTGTCGGACACAGACATGCTAGCCAAACTAAAGTGTTCATGCTTTTATAAGGATTCCCCTTACTTTGATATCACATTAAACAAAATAAGGTTATATGGAGTATCCCCACCGATTTGAGATGGTGGTGATCTCCTTTACTATGATCTACCAACCACACATTCACACACAAGATAGCCCTTAAAGTGCAGAGACAAAATAATTATATACTAACAACTGTGCTAACGGCTACTAAGAGGTTGGTGATGATTTTCCCTTTTTGCCCCTCTTACTATATATATTTTTTACTATTGCGGATCTCACATTACTGCTTGGGGTGGGAGGCCACCTTGTCTTAACCTGACATAGAGGTAGCATGTGGCTTGAGTATTTTAAGAAATACTCAGTAAGTGACCCCACTATTGGTGGTTAAATGCAAGAACATGCAAATGCAATGACGGGACCTATCATATCAATCTCTTTTCCTACGGGACTATCCTAATGGGCAGCTTGGATGTGTACCTTATACTCTACACATAGCCCATACATGCGAGTATGGGCTCACCAGACAATTCGCACACTGCTGGGCCCCTTTTCTTGTCGAGCGAGCCTTTTCTGGTAGCTCCTTATGCCGGACACCCATTAGAATTAGTAACCGTCACAACAACATTATGTAAAATACAATGATACTTCACCTGCCTAGTGGTGTACGCGTCCGTACCCTCGTGATGGAATAGGGGTATCCCCCAATGCATGTGCACATGAGGTCCCAATATTTTTCCGTTTTCAACATTATTAAATATAACTCCGCTATCATTTCTCATTCATATCATATCGATTCTCATTTTTTAGTCCTCATATCATATCATTTCTCTATCATACATAATTCTAATGGGGTTATCTTTCATGTCATTTATATCATGCTGTATACACACAATTTAGGAAACATGACATAATGTTCTATGCTTTTAACATAACATTTCATCATATACATATCATACCATTTCTTTTAACATACACTTCGCCTAACTAAGTCAGTGTGCCCATTGCTTGGGTCTCCAGAAACACCTTAGATAAGTTTCCAAACTCTTGTTGACGATCTAAGTTTGCTCATCAGTCTGTGGGTGGTAGGCTTTGTTGCGTTATAGTTGGGGGACTTGAAGCGTGAAGGATTCAACTAAAAGTTGCTGATGAATACCTTGTCTCTGTCAGACACTATGGATCGAGGAAAACCAAGGAGCTTGACTATCGATTCGTGAAGAGAGAGATAATTGTCTTCGTGGTACAAGGATGGTTTAACATCAAGAAATAGGCATGTTTAGGCACTCCACCAGAATTAGAATTGTGTCATTCCTGTTAGATCAGGGAAGACCTTCAGTGCAATCCATGGTGAATTCCTTTTAGATTTTATCAGGAATGGGTAGTTGTAGTAAGAGTCCCGTTGGTGACATGGCCATCGTTTTGTTCCATTGGCAAATTCCACATTTCTCCATGTATTTCTTTACATCCCTCTTCATTCCTTGTTAGTTCACAAGAATCCTGAGTGCCTCCCCCTAATCGAGTCATGATACGTATGAAGCACCGCTGGTATGGTTTGGTATACAACCATTTTTTTCCTTATTGAGAAGAGTATTTAGGTGAATTGAAAACTTGTGGTGGATGACAGGATCATTCTCAATGTCTGAACAGATACAACAAAGATGTTCATCCTCACTGATTTCTTTCTCGACAATTTCAAGATCTAGTATGGTTGGAGTTGTTAAGTTTGCTAAATGAACTGTGGGTGGCCATACATGAAAGAGAATCTGCTACTTTATTCTTGAGGTTTGGCTTGCATTGGATCTCAAAGTCATGGTCTAGCAGTTTCAAGACCCACTTTAGATACTTCGGCTGAATTATCTTCTATTCTATCAAGTATTTCAATGAATGCTGGTCTATCTTCACAATAAAATGGTGTTCTGAACTGCCATAACCATGGTCATCAGTTCTCGCTCATATTTCGATTTGGCTTGTGCTTGTGCCAATGAAGTATGACTAAAATAGGCAATCGAATGGTGACAACCCTTAGACTTGTCCCTTAGGCATCCATTTCCACCACGAAATGATTACATAATCAGGGAGAGCCATCATAGGCAGTGTGACCACAGCTTGCTCTAGAGATTTTAAGGCCTGAAAGGCTTCATCACTTCATCCAAAGGCAATGTTTCTTGACATATGGTGTAATGGGCAATGCAACCATATTTGGGTATGAACGTCAATAGTAACTGGTTAGCCCTAGGAAACCTCTCAGTTCTCGAACATTCACTGGTTGAGACCCTTTAATTTTCTAACATTTTCAGAGCCAACTTCTACACCTTTCACAAAGACCAAATGTCCTAAATAATTGGTTTGATCCCGTGCAAACTTACACTTCTTCAAGTTGGCCAACAAGGAACTGTCACACATAGTATTCAAAATCACCGTCAAGTGTGTCACATGAGTCTCCAAGTTAGTGTTGTAAATCATAATATTGTAAAAAAAGCACAAGAACAAATCTTCTTAGGAAAGGGTTAAATGCTTGGATCATAGCGGCTAGGATGTGGCTGGAGCATTTTGTTAGGCCAAATGGCATCCAAATGGCATCACTAAGAACTCATGGTAGCCTTCAAGTGTCCTAAATGCAGTTTTAAGAATGCCTGATTTGTAAATCGAAATATGATGATACCCTGACCTCAAATCAAGTTTCGAATATACTCTGGACCTGCATAGTTCATCAAACAACTCTTCAATGACTTGGATTGGGAACTTGTCTAAAAGTGTAGTTTCCTTCTAAGTTCTGTAATCTATCAAGACCTTCCACCTTCGTTGTTACTACAAGACTAGGCTTGAATAGGGGCTAGTACTTGGCTTAATGATTCCAGTCGTAAGCATCTTGTTATCTCATCTTTCTAGACCACTTGGTAGTGATATGGGTGCACATTGATCAGCTCGTAGCCTTCCTTCAATTGAATACGGTGATCTAGATCGCGCCTCGGGGGAATTTGGGATGTTGATTGGAAAACATCGGTGTAGCCCGTCTAGAGCTTGTCCACTTCACTAGGAAGATTTGAAGGGGGGATTGCGTTTAGGAAATTAAAATCTTCAACTTGTTCTATTATCTTCTTAGAGCTCCACGTGGAAGGGCCACGCTGTTTCCATGACCGTTTGAGACTCTCTATCAAAGCTTCTTTTTGGGTAAGAGAAGGGTCATCCTCGATCAGGATCCTTGAATCCCCAATTCTGATGGCTAATGCCAGGCCCTTGTTGTCAACCTTAGGCAATCCTAGTGTTTGGAGCCATTGCATTCCTTATAATATCAGATTGATCCCTTTAGTTCCAGAGGTATACGATTTAATCATTAGACTTGCAATAGAAACCACGAGTCCCGTGCATACTCCCTTACCTCTAATTGCTGTTCTTACCCCCTTAATAACCCCATAATTGGTCATTTCAAAGACGAGCATTTTGATCTTGATGAGAGATGAAATTGTGTGTAGTATCGCAATCAACAAAGACAATTACCTTTGCATTCTCGGTTCACCCCACTATCTTGATGGTGCCTGGATTGGATAATCTCCTCAATAGCATTTAAGACAACTCTACTACTTTGATCATGGTTTATTCTAGCTTGTCGTTCCTAGAATCGATGTCCATTTCTTAAGCTCCTGTATCATCATGCACAACTAATAGCTCGAGTTATTTGCTCTTGCATTTATGGCCTATGGAGCATTTCTCATCACATCTATAACAAATGGCCTTTTCACATTATGATTGCATCTTTAACGTCTATCAATTGTTAGCAATGTATGTCTTTTTGTGAGCTGCGCTGAAGGTCGGATGGGGTTGGGCTCTATTGTTTTAGGTGGGATTTTGGCTGGGGTATCAAATTAATTAACACTTGCACCCGTGTAAGTCCTTCAATTTGTATTCTCTTGGAGTGGTTTCCCTTTTTTTCTTGGGTTCAGGTTCTGAGACTAATCGATGGCCAATGCTGCAATGGCGCATCGAGTTTCCTTTGTGGCTTGCCTTTGTTCTTTGGTGGTGTTTAAAGTACTAGTCGATATTCTTGTGTTTCTGTTGTAACCTTCTGTTCCACTGATTGAACATTCGTGCAATGATGTCATTTTCTTAATTGTCTAGTCTATCTCTGGTAGCCTCTGTGTCTCTTCTCTCACCTTGTTTCTAGTTCTCTTAGACTCCTCCAAATGTTCCTGAAGGTGTTCTCAAGCCATCTTTCCTAGATGACACGCAAAGTACCAGAAACCCCAAAAGCTTGGAAGCTCGTATGTTATTTTCCAAAAGCTAGGCAACTTATTACTTTTCTGCTGCTAATTCATTTTTGTTGGCTGGAATTTCCTTTTGATAGTCTCGCTGATCGTCTTTCTGCTTTGTTGGTTGGTTCTTGAATTTGGTGGCTTTTCTTTGGAGGTTTTTTTTTCTTTGGCGTTGTTGGTTGGCTTTGGTTCCTTGTGTCACAATTGTACTCTTACTCTTGTGGCAGCAGGACAACGATTGTGCAGCACTTGTTCTATCCCGGCGAACAAGTCAGTCATACGAAAGTCGGACTTTGTGGTCAATCTTAGTGTATGATTAAGTCTCAGGTCACGTTTGAAAGAAATACTTTATAAAGTGTGAGCGAGGAAATGTGTTGAAAACAATTTGAAAGAAATCAATGTTATAAGCTAAAAACAAATAAGTAACGACGACTTTGATAGCATATAACCTGGGTAGGAAAAATTGACTAGTCACATCCCCCTATAGTACATTTTGGGGCATTTTAGCATTGACGGGTCTATACATGATTTTAGAGACTGGTCATACACTCTCATATTGACACAACAAAAAATAGTAAATGTCTATCTAACATGAAAGCAAGTGAAAGAGGTTTGGAATTGGCATGTGGCCATGGACAACACATCTTGGACAAGTATGATCGGGCCATCTGACACGCGGTCACAAGCAACACGCCTCGAACAAGCATGACCGTGACACCTTTGTCCTGTCCTCTCTGTGTAGCTCCTATTTCCTCTTTGATGTTTGCGGCTGTGCCTTTCCTTGTGTCTCTTCCTTCATTTTTTATTGTCTTTGTTTGGATGGTCCCGTTTTGCTCTCTCTCTTCTTCTTTTTTCTTTGTTAACGGCATTTTTTCTTTTCACTCCCAAAGGGAGTTTCTACCCTTGAGGATTTTATTTCTTTTCTTCAGCAGTGCAAACTTGTTTCTCGTTAGGAGAAAAAGAAAAGGAATAATATTAGTTGATGCCTATAGTTAGTATAAAATATCAAGTCAACAAACTGCCACGGTAAAGTACAGTAAGGAAGGTACATTTAGGGCTCCAGTGCCCAATATGTGTAGGACATGACACTTTACCTTAACTATAGTATCCATGCTTCATAGCTTCTGGTTAATCTTTAATATTTGTTGATTTTTACTCCTCTATAGGGCTCCAGGGTTTAGAGTGTGTCTCGCACCCAACAGGCTAGGGTGTTGAGGGATGAACTAGTCCCTGTCCTTTGTTTCTCACTTCTTTTGGAAAATTCATGACTGCCATGATTTATGCTGGAAATATTTGATGGGCATAAGCATAATCCGAATTAAGTAGCCTCATTGGAGTCTTTATGTAACAACTTTGGTTTTGTATAAAACTATTTATCCTCCCTTCAGCAACTGGTGTTATCTTTTGTTTATCCAGCATACCGGTGATTAATTGTTATTTTATCATTTGAAAGTCCTTATCATTGCTCTTAGAAAGCTGAACAATGTTAATATTCTTGTTTGTTGACTTGGTAGTTTATAGTACTTTAAAACGATTGGTACCCATTTTCTCTGTTGAGCCATATTTTAAACTTCTTCCCGGTTTAATTTCCTAGTGCAAATCCCTGTTGTGGCTCTAAATGACGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAAGCTGTCAATAAAGAGAGAAGGAAACTGAAATTGAACTCCCTTCCTTTCTCATTAACATGCCTACTCCACAAGAATTACATCTTGGCTGACCCTACTGCGGAGGAGGAGTCTGTCATGGAAACTATTGTAACCGTGGTCTTGGATTCATCTGGTCAACTAGTGTCCTTCTACAAACCGGGTGGATCTGTGCTTGCCTATACATCAGCTGTTCAGGTTGGTCTCTCTTTCTCTGACATGTTTATTAATGGAATCCAATTCGTTAGAGAATGGATTAGTTCCCTGGATTTCTTCATTCTTCACATTTTTTGTTTGCAAAGTTTGGTCAAGCTAGTTGGATTTTCAATATGATGTTGGATTATAAAAATAATAATGTTTGATTTTTTAAAAAACATTATTGAAAATTCTAAAAATGTTTAAGAACACCTTATCACAGTAGAGGAAACAAGCTTTTAATTTACTCAATAAATAATGAATTGACTTGATGATTTGTATTATCATCATTACCATCTTTACTTTTCAAGAAACACTTTGATTTGTGAAAAAGTTATAATATCATCCAAGCCCAAAAGCTTCTCTGGTTTGCTTATCTTGCCTTAGGATGCATATTCTTTATAAGTAAGATATTTTGGAAGTGATTTTGTAAGGAACTCGAAAAATAATTAATTGACTTGATGGTTATATTAATATTAATTATCGTCATCATTGTTTGTAATATCATCCAATTCCAAAAGTTTATCTTGGTTTAGTACGCATCTTTATGTAAACTGATATTTTTACTCTAGAATACGAACATCTTTGAGAGTGATTTTGAAATGGTTAAACTTATTTTTATCAAATTCAAAATCACTCAAAAACATGATTTAAATTTTTTACGATAAGAAAATTGTGTTCAAAAGTGTAAAATTAAACATTAAATGGATTTTGAATGATTAAAGTCATCTTGATGAAAATGATTTTAACTGTTTCAAAATACTTTAATTGGTATATCATGATTTACGTGCTCTAATCCGTATGGGGATGGCGTGCTTGCAGGATTGTGTTGCACTGACGAGACAAAGATCAAAAGAACTACAGATGATTTTGGATGAAGCAATTTCTGGTATGGAAATTGACTAAGTTTTAGGGAGGCCTTCTATATTTTTTTTTTCCTGGTTTAATGAATGAAAAGCTGAATGGTTTGTAGGCTTCCAATTATATACTTAGTTTGGTTGTCTAAAGAATTTTGGTGATGATATTTGTTTTCCCTGGAGATCGTTTTTCTTAGAATTTGGTCTCAGGAATCAATTTTGGTGCAGGGGTCGGATTTCTACATTCAAATATCTCTCTATTACTAATTGAACTTCATTTCTCGCTTTTTATTTGCATCAACTTGATAACAATGGAATGGAACCTGACTGATAGGCAAATAGAAGTTTACATTATGATAGAAAACATAGGGATGCCATATGCTCTGCCAAAAATTGTCTACTTTTTCTTGTTCTATTGCATGTATGTGAGACTCTAATGATATATTCAATATATCTTACTAGAAACAAGTTCAAGAAAGAAAGGTGCGTATATATTCTATTTTTCTGATGGTTTATATATATATATATATATATATATATATATCTATATAGAATGAAGGCCCGTACGAGACGCGACGTTAGCACTCCCAAAAAAAAAGAATTGACTGATCAAACGCAGGCGGACTGCTCTACATTCAACCACGCCACTTGATTGGACCTCTTGTATGGCTGGCCGAGGAGGGATTTGAACCCCCGACACTGTGGTTCGTAGCCACGTGCTCTTTTGATTTCTTTGACTATTTGCCTTTCTCTTTCGCTTCCCCTTTTTCAGACGCTGATACCTTAACCTTTGACCTGGCTGTTACGGATTCGACCACGGAAGTCCAGAAATGA

mRNA sequence

ATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGAAGACTCTTTCCAATTCAGTTTTTTGAGCGTCATCTCGCTGAATCAATACGTCCTGATGGAAGAGCACTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAACGGATCAGCCCTGGCTAAGGTTGGTTCTACGACAATGTTGGCTGCTATTAAAATGGAGGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGCATAGCTGTCGAATTCCACATGCCCCCCATATGCTCTCCAATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGCGTGGATGGCATACTTGGATATTTACTGTTTGGATGCCGACGGATCTCTATTCGATGCTGCACTTCTTTCTCTAGCTGCTGCATTTTCTCACTTGCAAATCCCTGTTGTGGCTCTAAATGACGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAAGCTGTCAATAAAGAGAGAAGGAAACTGAAATTGAACTCCCTTCCTTTCTCATTAACATGCCTACTCCACAAGAATTACATCTTGGCTGACCCTACTGCGGAGGAGGAGTCTGTCATGGAAACTATTGTAACCGTGGTCTTGGATTCATCTGGTCAACTAGTGTCCTTCTACAAACCGGGTGGATCTGTGCTTGCCTATACATCAGCTGTTCAGGATTGTGTTGCACTGACGAGACAAAGATCAAAAGAACTACAGATGATTTTGGATGAAGCAATTTCTGACGCTGATACCTTAACCTTTGACCTGGCTGTTACGGATTCGACCACGGAAGTCCAGAAATGA

Coding sequence (CDS)

ATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGAAGACTCTTTCCAATTCAGTTTTTTGAGCGTCATCTCGCTGAATCAATACGTCCTGATGGAAGAGCACTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAACGGATCAGCCCTGGCTAAGGTTGGTTCTACGACAATGTTGGCTGCTATTAAAATGGAGGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGCATAGCTGTCGAATTCCACATGCCCCCCATATGCTCTCCAATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGCGTGGATGGCATACTTGGATATTTACTGTTTGGATGCCGACGGATCTCTATTCGATGCTGCACTTCTTTCTCTAGCTGCTGCATTTTCTCACTTGCAAATCCCTGTTGTGGCTCTAAATGACGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAAGCTGTCAATAAAGAGAGAAGGAAACTGAAATTGAACTCCCTTCCTTTCTCATTAACATGCCTACTCCACAAGAATTACATCTTGGCTGACCCTACTGCGGAGGAGGAGTCTGTCATGGAAACTATTGTAACCGTGGTCTTGGATTCATCTGGTCAACTAGTGTCCTTCTACAAACCGGGTGGATCTGTGCTTGCCTATACATCAGCTGTTCAGGATTGTGTTGCACTGACGAGACAAAGATCAAAAGAACTACAGATGATTTTGGATGAAGCAATTTCTGACGCTGATACCTTAACCTTTGACCTGGCTGTTACGGATTCGACCACGGAAGTCCAGAAATGA

Protein sequence

MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISDADTLTFDLAVTDSTTEVQK

Homology

[Close]

BLAST of Csor.00g255860 vs. ExPASy Swiss-Prot
Match: Q96B26 (Exosome complex component RRP43 OS=Homo sapiens OX=9606 GN=EXOSC8 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.9e-46
Identity = 98/280 (35.00%), Postives = 164/280 (58.57%), Query Frame = 0


Query: 20  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKM 79
           F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K 
Sbjct: 5   FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64

Query: 80  EVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLREL 139
           E   PS ++PD+G +     +PP+CS   R G P E A V S+ ++D I +S +I   +L
Sbjct: 65  EFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124

Query: 140 SLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQIPVVALNDDGKVVFVSEEEG 199
            +  GK  W+ Y D+ CLD DG++ DA   +L AA  ++Q+P V +N++  +        
Sbjct: 125 CISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALA------- 184

Query: 200 GENFEKEAVNKERRKLKLNSLPFSLT-CLLHKNYILADPTAEEESVMETIVTVVLDSSGQ 259
                 E   K++  L + + P + +  +     ++ DPT EEE +    +T+V+D  G+
Sbjct: 185 ------EVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEEGK 244

Query: 260 LVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAI 299
           L   +KPGGS L   + +QDC++    R KE++ ++DE I
Sbjct: 245 LCCLHKPGGSGLT-GAKLQDCMSRAVTRHKEVKKLMDEVI 270

[Close]

BLAST of Csor.00g255860 vs. ExPASy Swiss-Prot
Match: Q9D753 (Exosome complex component RRP43 OS=Mus musculus OX=10090 GN=Exosc8 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-45
Identity = 101/279 (36.20%), Postives = 162/279 (58.06%), Query Frame = 0


Query: 20  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKM 79
           F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K 
Sbjct: 5   FKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVICGVKA 64

Query: 80  EVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLREL 139
           E   P +++PD G +     +PP+CS   R G P E A V S+ ++D + +S +I   +L
Sbjct: 65  EFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDL 124

Query: 140 SLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQIPVVALNDDGKVVFVSEEEG 199
            +  GK AW+ Y D+ CLD DG++ DA   +L AA  ++Q+P V +N++  +  V     
Sbjct: 125 CISPGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEV----- 184

Query: 200 GENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQL 259
             N +K    K    ++ N +  S   +     ++ DPT EEE +    +TVV D  G+L
Sbjct: 185 --NLKK----KSYLNVRTNPVATSF-AVFDDTLLIVDPTGEEEHLSTGTLTVVTDEDGKL 244

Query: 260 VSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAI 299
              +KPGGS L   + +QDC++    R KE+  +LDE I
Sbjct: 245 CCLHKPGGSGLT-GAKLQDCMSRAVTRHKEVSKLLDEVI 270

[Close]

BLAST of Csor.00g255860 vs. ExPASy Swiss-Prot
Match: Q2KHU3 (Exosome complex component RRP43 OS=Bos taurus OX=9913 GN=EXOSC8 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.0e-43
Identity = 98/277 (35.38%), Postives = 161/277 (58.12%), Query Frame = 0


Query: 20  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKM 79
           F+ + P++++ R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  IK 
Sbjct: 5   FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSIGTADGSALVKLGNTTVICGIKA 64

Query: 80  EVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLREL 139
           E   P  ++PD+G +     + P+CS   R G P E A V S+ ++D I +S +I   +L
Sbjct: 65  EFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124

Query: 140 SLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQIPVVALNDDGKVVFVSEEEG 199
            +  GK AW+ Y D+ CL+ DG++ DA   +L AA  ++Q+P V +N++  +  V+ +  
Sbjct: 125 CISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLK-- 184

Query: 200 GENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQL 259
               +K  +N     +  +   F  T L      + DPT EEE +    +TVV+D  G+L
Sbjct: 185 ----KKSCLNIRTHPVATSFAVFDDTLL------IVDPTEEEEHLATGTLTVVMDEEGRL 244

Query: 260 VSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDE 297
              +KPGGS L   + +QDC++    R KE++ ++DE
Sbjct: 245 CCLHKPGGSGLT-GAKLQDCMSRAVTRHKEVKKLMDE 268

[Close]

BLAST of Csor.00g255860 vs. ExPASy Swiss-Prot
Match: Q10205 (Exosome complex component rrp43 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp43 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.8e-33
Identity = 83/267 (31.09%), Postives = 145/267 (54.31%), Query Frame = 0


Query: 20  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKM 79
           F+++ P Q+    L + +R DGR++ + R+  I    +S+ANGSA+ + G    +  IK 
Sbjct: 17  FKKITPEQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIKA 76

Query: 80  EVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLREL 139
           E+  P   SP+EG I     + P+CS   +PG P++ A V+S++L  T+  S +I+L+ L
Sbjct: 77  EIAEPFENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQSL 136

Query: 140 SLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQIPVVALNDDGKVVFVSEEEG 199
            + + KAAW+ Y DI CL+ DGS FD A  +L AA   +++P    ++D + V       
Sbjct: 137 CIFEKKAAWVLYADIICLNYDGSAFDYAWAALFAALKTVKLPTAVWDEDLERVI------ 196

Query: 200 GENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQL 259
                    +   R ++L++   S +  +  + +LADPT EEE +    +T++L+SS  +
Sbjct: 197 -------CASTLTRPVQLSTEVRSFSWSVFDDKLLADPTDEEEDLSTEFLTIMLNSSKNI 256

Query: 260 VSFYKPGGSVLAYTSAVQDCVALTRQR 287
           V   K GG+ +     ++ C+ + R +
Sbjct: 257 VKIIKLGGTHI-QPLLLKKCIEVARSK 269

[Close]

BLAST of Csor.00g255860 vs. ExPASy Swiss-Prot
Match: Q8TYC2 (Exosome complex component Rrp42 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=rrp42 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.1e-32
Identity = 83/255 (32.55%), Postives = 140/255 (54.90%), Query Frame = 0


Query: 38  RPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVE 97
           R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +AV 
Sbjct: 23  RIDGRDFEEFRPIEVRAGVISKANGSALVRLGNTQLVVGVKLEVGRPYPDSPNEGALAVN 82

Query: 98  FHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCL 157
             + P+  P   PG P E A  +S+ +   I  S MIDL EL + +G+  W+ ++DI+ L
Sbjct: 83  AELVPLADPSFEPGPPDENAIELSRVVDRGIRESEMIDLEELCIEEGEHCWVTFVDIHVL 142

Query: 158 DADGSLFDAALLSLAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKL 217
           D DG+LFDA+++   +A S  ++P   + DD               E E + ++   L +
Sbjct: 143 DHDGNLFDASMIGSVSALSITEVPKAEVVDD---------------EVEVMEEDTEPLAI 202

Query: 218 NSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS-AV 277
           N  P S+T      Y+L DP  EEE +M+T +TV +  SG++ +  K  G +  +    +
Sbjct: 203 NDFPISVTIAKVGEYLLVDPCLEEEVIMDTRLTVTVTESGEVCAVQK--GELGDFPEHLL 260

Query: 278 QDCVALTRQRSKELQ 292
           +D + L  ++++E++
Sbjct: 263 EDAIDLATKKAEEVR 260

[Close]

BLAST of Csor.00g255860 vs. NCBI nr
Match: KAG6603214.1 (Exosome complex component RRP43, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 607 bits (1565), Expect = 1.71e-218
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISD 300
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISD
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISD 300

Query: 301 ADTLTFDLAVTDSTTEVQK 319
           ADTLTFDLAVTDSTTEVQK
Sbjct: 301 ADTLTFDLAVTDSTTEVQK 319

[Close]

BLAST of Csor.00g255860 vs. NCBI nr
Match: KAG7033523.1 (Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 568 bits (1465), Expect = 1.70e-203
Identity = 297/299 (99.33%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAV+FHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299

[Close]

BLAST of Csor.00g255860 vs. NCBI nr
Match: XP_023544252.1 (exosome complex component RRP43 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567 bits (1462), Expect = 4.88e-203
Identity = 296/299 (99.00%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAV+FHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           PVVALNDDGKVVFVSEEEGGENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299

[Close]

BLAST of Csor.00g255860 vs. NCBI nr
Match: XP_022928740.1 (exosome complex component RRP43 [Cucurbita moschata])

HSP 1 Score: 565 bits (1457), Expect = 2.82e-202
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAV+FHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           P VALNDDGKVVFVSEEEGGENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAE
Sbjct: 181 PFVALNDDGKVVFVSEEEGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299

[Close]

BLAST of Csor.00g255860 vs. NCBI nr
Match: XP_022967860.1 (exosome complex component RRP43 [Cucurbita maxima])

HSP 1 Score: 563 bits (1450), Expect = 3.29e-201
Identity = 294/299 (98.33%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAV+FHMP ICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPSICSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           PVVALNDDGKVVFVSEE+GGENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEKGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299

[Close]

BLAST of Csor.00g255860 vs. ExPASy TrEMBL
Match: A0A6J1ESF5 (exosome complex component RRP43 OS=Cucurbita moschata OX=3662 GN=LOC111435558 PE=4 SV=1)

HSP 1 Score: 565 bits (1457), Expect = 1.37e-202
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAV+FHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           P VALNDDGKVVFVSEEEGGENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAE
Sbjct: 181 PFVALNDDGKVVFVSEEEGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299

[Close]

BLAST of Csor.00g255860 vs. ExPASy TrEMBL
Match: A0A6J1HVL5 (exosome complex component RRP43 OS=Cucurbita maxima OX=3661 GN=LOC111467240 PE=4 SV=1)

HSP 1 Score: 563 bits (1450), Expect = 1.59e-201
Identity = 294/299 (98.33%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAV+FHMP ICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPSICSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           PVVALNDDGKVVFVSEE+GGENFEKEAVNKE+RKLKLNSLPFSLTCLLHKNYILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEKGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299

[Close]

BLAST of Csor.00g255860 vs. ExPASy TrEMBL
Match: A0A1S3CEE1 (exosome complex component RRP43 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499535 PE=4 SV=1)

HSP 1 Score: 554 bits (1428), Expect = 3.59e-198
Identity = 284/299 (94.98%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAK+GSTTMLAAIKMEVMTPS+ESPDEGCIA++FHMPP+CSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           PVVALNDDG+VVFVSEEEGGENFEKE VNKE+RKLKLNS+PFSLTCLLHK YILADPTAE
Sbjct: 181 PVVALNDDGRVVFVSEEEGGENFEKEPVNKEKRKLKLNSVPFSLTCLLHKKYILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAIS
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAIS 299

[Close]

BLAST of Csor.00g255860 vs. ExPASy TrEMBL
Match: A0A1S3CD66 (exosome complex component RRP43 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499535 PE=4 SV=1)

HSP 1 Score: 554 bits (1428), Expect = 5.58e-198
Identity = 284/299 (94.98%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 13  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALGKARDTTIALGPVSSA 72

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAK+GSTTMLAAIKMEVMTPS+ESPDEGCIA++FHMPP+CSPIVRPGRPAEAAPVI
Sbjct: 73  NGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVI 132

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 133 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 192

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           PVVALNDDG+VVFVSEEEGGENFEKE VNKE+RKLKLNS+PFSLTCLLHK YILADPTAE
Sbjct: 193 PVVALNDDGRVVFVSEEEGGENFEKEPVNKEKRKLKLNSVPFSLTCLLHKKYILADPTAE 252

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAIS
Sbjct: 253 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAIS 311

[Close]

BLAST of Csor.00g255860 vs. ExPASy TrEMBL
Match: A0A6J1DFM7 (exosome complex component RRP43 OS=Momordica charantia OX=3673 GN=LOC111020008 PE=4 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 1.40e-195
Identity = 281/299 (93.98%), Postives = 294/299 (98.33%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERH AESIRPDGRALGKARDTTIALGPVSSA
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHFAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           NGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA++FHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS AAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240
           PVVALNDDGKVVFVSEEEGGENFEKE VNKE+RKLKL+S+PFSLTC+LHKN+ILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLSSIPFSLTCILHKNHILADPTAE 240

Query: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAIS 299
           EES+METIVTVVLD SGQLVSFYKPGGSVLA+TSAVQDCVALTRQR KELQ+ILDEAIS
Sbjct: 241 EESIMETIVTVVLDLSGQLVSFYKPGGSVLAFTSAVQDCVALTRQRVKELQVILDEAIS 299

[Close]

BLAST of Csor.00g255860 vs. TAIR 10
Match: AT1G60080.1 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-124
Identity = 224/299 (74.92%), Postives = 266/299 (88.96%), Query Frame = 0


Query: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60
           MG+P+AA  DLS+EMEVDAFRR+FP++FFERHL+ES+RPDGR LGKARDT + LG VS+A
Sbjct: 1   MGIPDAAQ-DLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTA 60

Query: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVEFHMPPICSPIVRPGRPAEAAPVI 120
           +GSALAK+GSTTMLAAI+MEVMTPS +SPDEGCIA+EFHMPPICSP VRPGRPAEAAPVI
Sbjct: 61  DGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVI 120

Query: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQI 180
           SK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+  AAFS+LQI
Sbjct: 121 SKRLSDTILSSGMIDLKELCLVSGKAAWMGYLDIYCLDADGALFDAALLAAVAAFSNLQI 180

Query: 181 PVVALNDDGKVVFVSEEEGGEN---FEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADP 240
           P+VALND+G++V V+ E+  +N    EKEAVNKE+RKL L ++PFSLTC+LHKNYILADP
Sbjct: 181 PIVALNDNGRIVAVTGEKDQDNALITEKEAVNKEKRKLTLKNIPFSLTCILHKNYILADP 240

Query: 241 TAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDE 297
           T EEES+M+T+VTVVLDSS Q+VSFYK GG+ LAY+SA++ CV L R+R+KEL+ IL E
Sbjct: 241 TTEEESIMDTLVTVVLDSSDQMVSFYKSGGAALAYSSAIKSCVELARKRAKELKQILGE 298

[Close]

BLAST of Csor.00g255860 vs. TAIR 10
Match: AT3G07750.1 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-22
Identity = 82/280 (29.29%), Postives = 137/280 (48.93%), Query Frame = 0


Query: 28  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIE 87
           F +  +A+ +R DGR     R   +  G +  ANGSA  ++G T ++A++K E+  PS  
Sbjct: 10  FIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPSSL 69

Query: 88  SPDEGCIAVEFHMPPICSPIV--RPGR--PAEAAPVISKQLSDTISSSGM-IDLRELSLV 147
            PD+G +AV     P   P    R G    +E A  + + L    S +G  I+L  L + 
Sbjct: 70  QPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAGINLSSLLIK 129

Query: 148 KGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQIPVVALNDDGKVVFVSEEEGGEN 207
           +GK  W  Y+D   + +DG+L DA   ++ AA ++  IP        KV   +E    E 
Sbjct: 130 EGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIP--------KVNVSAEVADDEQ 189

Query: 208 FEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSF 267
            E +  ++E  +   +S+P  +T      + + D TAEEES M + V++ ++ +G +   
Sbjct: 190 PEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRTGHICGL 249

Query: 268 YKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISDAD 303
            K  GS L   S + D +++ +  ++ L   LD  IS A+
Sbjct: 250 TKRSGSGLD-PSVILDMISVAKHVTETLMSKLDSEISAAE 280

[Close]

BLAST of Csor.00g255860 vs. TAIR 10
Match: AT3G07750.2 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-22
Identity = 82/280 (29.29%), Postives = 137/280 (48.93%), Query Frame = 0


Query: 28  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKVGSTTMLAAIKMEVMTPSIE 87
           F +  +A+ +R DGR     R   +  G +  ANGSA  ++G T ++A++K E+  PS  
Sbjct: 10  FIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPSSL 69

Query: 88  SPDEGCIAVEFHMPPICSPIV--RPGR--PAEAAPVISKQLSDTISSSGM-IDLRELSLV 147
            PD+G +AV     P   P    R G    +E A  + + L    S +G  I+L  L + 
Sbjct: 70  QPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAGINLSSLLIK 129

Query: 148 KGKAAWMAYLDIYCLDADGSLFDAALLSLAAAFSHLQIPVVALNDDGKVVFVSEEEGGEN 207
           +GK  W  Y+D   + +DG+L DA   ++ AA ++  IP        KV   +E    E 
Sbjct: 130 EGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIP--------KVNVSAEVADDEQ 189

Query: 208 FEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAEEESVMETIVTVVLDSSGQLVSF 267
            E +  ++E  +   +S+P  +T      + + D TAEEES M + V++ ++ +G +   
Sbjct: 190 PEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRTGHICGL 249

Query: 268 YKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISDAD 303
            K  GS L   S + D +++ +  ++ L   LD  IS A+
Sbjct: 250 TKRSGSGLD-PSVILDMISVAKHVTETLMSKLDSEISAAE 280

The following BLAST results are available for this feature:

BLAST of Csor.00g255860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96B26	4.9e-46	35.00	Exosome complex component RRP43 OS=Homo sapiens OX=9606 GN=EXOSC8 PE=1 SV=1	[more]
Q9D753	1.1e-45	36.20	Exosome complex component RRP43 OS=Mus musculus OX=10090 GN=Exosc8 PE=1 SV=1	[more]
Q2KHU3	3.0e-43	35.38	Exosome complex component RRP43 OS=Bos taurus OX=9913 GN=EXOSC8 PE=2 SV=1	[more]
Q10205	2.8e-33	31.09	Exosome complex component rrp43 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q8TYC2	3.1e-32	32.55	Exosome complex component Rrp42 OS=Methanopyrus kandleri (strain AV19 / DSM 6324...	[more]

BLAST of Csor.00g255860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603214.1	1.71e-218	100.00	Exosome complex component RRP43, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7033523.1	1.70e-203	99.33	Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023544252.1	4.88e-203	99.00	exosome complex component RRP43 [Cucurbita pepo subsp. pepo]	[more]
XP_022928740.1	2.82e-202	98.66	exosome complex component RRP43 [Cucurbita moschata]	[more]
XP_022967860.1	3.29e-201	98.33	exosome complex component RRP43 [Cucurbita maxima]	[more]

BLAST of Csor.00g255860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESF5	1.37e-202	98.66	exosome complex component RRP43 OS=Cucurbita moschata OX=3662 GN=LOC111435558 PE...	[more]
A0A6J1HVL5	1.59e-201	98.33	exosome complex component RRP43 OS=Cucurbita maxima OX=3661 GN=LOC111467240 PE=4...	[more]
A0A1S3CEE1	3.59e-198	94.98	exosome complex component RRP43 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034995...	[more]
A0A1S3CD66	5.58e-198	94.98	exosome complex component RRP43 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034995...	[more]
A0A6J1DFM7	1.40e-195	93.98	exosome complex component RRP43 OS=Momordica charantia OX=3673 GN=LOC111020008 P...	[more]

BLAST of Csor.00g255860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60080.1	1.2e-124	74.92	3'-5'-exoribonuclease family protein	[more]
AT3G07750.1	3.9e-22	29.29	3'-5'-exoribonuclease family protein	[more]
AT3G07750.2	3.9e-22	29.29	3'-5'-exoribonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 48..181 e-value: 1.3E-21 score: 77.5
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 221..268 e-value: 1.8E-4 score: 21.4
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 16..303 e-value: 1.4E-82 score: 279.3
None	No IPR available	PANTHER	PTHR11097	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	coord: 14..301
None	No IPR available	PANTHER	PTHR11097:SF28	SUBFAMILY NOT NAMED	coord: 14..301
None	No IPR available	CDD	cd11369	RNase_PH_RRP43	coord: 21..294 e-value: 6.07738E-115 score: 331.059
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 18..243
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 215..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g255860.m01	Csor.00g255860.m01	mRNA