Csor.00g255300 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g255300
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA repair protein RAD51 homolog 3 isoform X3
Location	Csor_Chr06: 8671992 .. 8676090 (-)
RNA-Seq Expression	Csor.00g255300
Synteny	Csor.00g255300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGGTATCATCACTTTCCTTTTCTTTTGATTGAACTTCCTGTTCAACATCTGTTTTCGCTTTAAATTCTTAGGTTTTCCGTTTTCTTTGGATTTTTATTCATATGTCATCGTTCTGTGTGTATTCTTGTTTTTTTTACCACTGGTGTAATATAATCCGACGCACGAGTTTGTTTAAAGGAGGTTGAAATTAGCCATTTCGGATCATTCGACCACTAGGATGAATTTCATTGCTGGAAAGTTTAACGTTTCAAGGAAATTTTATAAGAGAAAAAACATTCGGAAATCTCGAAGAGAACGAGAAATAGGAAACGACTCTTCGAGCCTTGAATTGTTGTAATGAATGAATATATTGTGATAATCAATCCGTAATCTCCTGAGTAGATCTTTTGACTTATGACTGTTGTTAATTTGAATTTCTGTGGCATAAATATAAAAAAGACTCAATGGATTAGATTAGATTTATGTTGAATTTTGGACCTCAAGGAATTTTATGACTCCGTATGTTCCTGTTGGAATTTATTAAACAGTTTTAATGACCAGAACTAGCTGCAGCATTGGTTCATTCTTCCTTTTGCTATATTTCAAGGCTAGATAATTTGAAATGTTTTCATGCTTGCATGCATACATCTTGTTATTATTGGTCCTTCAATTTGAACCACCTTCTCTGGCAGTGATTTAGAATTTGAACCACCTTCTCTGGCAGTGATTTAGAATTTGAACCACCTTCTCTGGCAGTTATTTGCGGTAATAGTTTTTCTTGAGAAGTAGCTTGTCTCAGGGTTTTCTTTTCTTGTTATCACGAAATGATAAATCTTGTGTATTTCTCTTAATTTCATCTATTTACTTATTTTCACCCTTTTCTGTTCAATTTCATCGGTCCTGTTACTTTAGTTTTCACTTTCATTGTCTGTGAATGTTGAGGGTTGCTAACAAGCCGTCTCATGTGATTCAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATTTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTACAGTTTCCTCTTTGCGTAGCTTATTTTTTGAAAGCAACAGTAAGAAGAAAACTGTGAACTGTGTGACTTATGAAATAAAAAATAAGGTGCACGTGATTTGTTTTTAATGTCATCCCTTTGTTGGATCTGGAAGTTTCTTCATTAAAGATGAGTACTTCATAGTTTGCTCAAAATAGATGTAGTTATCTAAATGAATAGACAAAATTGGCTCTTTTCTTTCTTTTTTTCTTCATTTTGAATGACAATTTTTTCAAATGTATGTTCCTTTTTATGAAGTTTCAACTGTGTTTTAGATAAAAAAAAAATAAAACTGCTACTGTTAACTTATTCACAGAGTGGTTTACTTCCATTAATTGGTTATGATGTATTTGTGTGTATCATATTTCTTCTGCCAAGCAATTTCTTCCTTATTGAATCATCTCATTGGTTGCAATCTTCTCATAGATCAAAAATACTTTATCAAAAGTGCAGATATCTTATGATATACCTTGATTGGTTCATTTACTGTCGCATAGTTGTTTAATAGATTAATGTACTATCAGTCAATTGGTTGGTGGTTATCCTTTTTTTTTGGTCTGTTTAAAATACTTCCACAACTAATTACTTCATTATTTTCTAATTATTATTAATATATCGTGGAACCAGCTCTGATCAATCCATGTAATTTCAAATATCTATTTTGGAATTCTTATCTAGGACAGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTTAGTGATTGTTATTCTCTCTGGTCAGTTGCATTATTACGTGTAATGAATACATTATATTCTCCCCTTTATTTTCTGAAGAAACATGCACGTTAGAATGGAATGTCAATTCATGTTCTCGATTGAAATATCTTAATCTCGCCCTTTTTTGTTTGAATGTCAACTCATGTTTTATTATTATGCTTTTAGTAGAGATATAATCATTTTATTTATTTATTTTTGCCAGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGTATGGATTTTTGTTGTATGTTTCTCTCCCAGTGTGAAAATTATTCTTTGTCATACAGAAATAAAATGACATAATGTTTATTTTGCATCGAGTAACAGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGGTAGGTTTCCATTCCAGATTTTGCTTCCAATGCTTTTGAAATTTTTTCTAGCAATCTATATTTGCAATCTAGTTAGGAACATGGCTTTCCTTGATGTTTAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTAGGTAGAATTTTCTTTAACTCTTTAAACTATTATCACTGTCTAGGAAAAGAATTCAGATACGTGTAGTTCTCTTGTCGTTCGAGTTTCTTGTATTACATTGCTTAATCGTTAATGATGCTGCTTGGAAGCTTTCTTCTTTTGTCTCAAGTAAATTGTTGTTTTTCTTGATTTGGATATTTCTAACCAAAAAGTTATCTGAATTACAATTTTTTTTCCTAGATCTTCTTTGTTGGCCTTCAGTTCAAGTATTTTGATAATTACTGATTATTTCTTTGCAGGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTAAGAATCAGTTATCTCATTATAATGTTTCAAACTAACATATATGGTAGAGTGTCAACTTAAATTGACATAAGTAGTGATTTACAAAGTTGAATGTGTCTCAACTTTATTAGCAAGCATGGACACTTTAAACTAGCACATTGAATAAGTTATATATATATATATACACACACACACAGACAATTTGACTCGTGGGAATAACAAAAATCAGTGTATTTGATTAATAAACTTCGAATTGCTCGATATCATGTCACATTTAGAACGTTTTGAAATATTTTGAATTCTCAATACATTTTTTCTAATACAAGATTCAGCATGATACAAGTAAATCATTTAAATGGATGAGAAATCCATATCTTTGAAGAAGATATTTTTCTTCCTATGCCCCTTTCATATCATGTCAATATCCTGAATTTGCATCTATACTCAACCAATGCTGAGAGAAACACACATATGCTTGGTTATGTCACTTTACCGTTTTTATTTTACGTATCATTTTCCTCCTAATTTCTTGTTTCATTCATGCTAGTAGTGACTAATTTGTTCTATTGTTTTTCTCCTCTTTTCTCCAACTCTTCGGCAGGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTATGTCATTTTTAAGTCTCCTCTTACCTTCCACTGTTAAAAATCATTGTTGATCTGTCACTTGTTGCACCCCCTTGGATGTCTTTAAGCATTCTGATTCCATTGAGTTGATTAGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAA

mRNA sequence

ATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATTTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAA

Coding sequence (CDS)

ATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATTTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAA

Protein sequence

MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI

Homology

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BLAST of Csor.00g255300 vs. ExPASy Swiss-Prot
Match: Q8GXF0 (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=RAD51C PE=1 SV=2)

HSP 1 Score: 508.4 bits (1308), Expect = 6.2e-143
Identity = 254/346 (73.41%), Postives = 305/346 (88.15%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR+  I+  EAFE+LK A+      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSC--- 81

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
             +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLDN+LGGGI+  +VTEIGGVPGIGKT
Sbjct: 82  -CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           Q+GIQL+VNVQIP   GGLGGKA+YIDTEGSFMVERA+QIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
            +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KFI+E+KDVKV+IVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTKF+EGSFQL LALGDSWSHSCTNR+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRV 321

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS+SS+KR KM+
Sbjct: 322 ILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363

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BLAST of Csor.00g255300 vs. ExPASy Swiss-Prot
Match: Q8R2J9 (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus OX=10029 GN=RAD51C PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.7e-71
Identity = 149/349 (42.69%), Postives = 225/349 (64.47%), Query Frame = 0


Query: 2   EVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDR 61
           E+   P+S T+R KL++AG+ T   +  V PS+L++E+ IS  EA E L+     S  D+
Sbjct: 4   ELVSFPLSPTVRVKLVAAGFQTAEDVLGVKPSELSKEVGISKEEALETLQIVRRESLTDK 63

Query: 62  PDGSGAIVNGAE-TAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 121
           P  +GA V G + TA ++L +E     I T C+ LDN+LGGGI   + TE+ GVPG+GKT
Sbjct: 64  PRCAGASVAGKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKT 123

Query: 122 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 181
           QL +QLAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +  + +       
Sbjct: 124 QLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHL--HLIAGTHKDE 183

Query: 182 PHQVQIQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQ 241
            HQ  ++    ++IL +I+YFR   YTE +A V  L  F++ H  V+++I+D +   FR 
Sbjct: 184 EHQKALEGFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRH 243

Query: 242 NFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCT 301
           + DDL+LRTRLL+ +A +++ LA     AV+L NQ+TTK  +    L  ALG+SW H+ T
Sbjct: 244 DLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAAT 303

Query: 302 NRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS--TSSNKRTK 345
            R+I +W   +R+A L KSPS + ++ P+ +T +G R++  T+S+ +T+
Sbjct: 304 IRLIFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAAVTASSSQTE 350

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BLAST of Csor.00g255300 vs. ExPASy Swiss-Prot
Match: Q924H5 (DNA repair protein RAD51 homolog 3 OS=Mus musculus OX=10090 GN=Rad51c PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.2e-69
Identity = 143/344 (41.57%), Postives = 223/344 (64.83%), Query Frame = 0


Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDRPDGSG 66
           P+S  +RGKL++AG+ T   +  V PS+L++E+ IS  EA E L+        ++P  +G
Sbjct: 9   PLSPAVRGKLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILRRECLTNKPRCAG 68

Query: 67  -AIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQ 126
            ++ N   TA ++L +E     I T C+ LDN+LGGGI   + TE+ GVPG+GKTQL +Q
Sbjct: 69  TSVANEKCTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQ 128

Query: 127 LAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQ 186
           LAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +  + +        HQ  
Sbjct: 129 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHL--HLIAGTHTEEEHQKA 188

Query: 187 IQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDL 246
           ++    ++IL +I+YFR   YTE +A V  L  F+++H  V+++I+D + F FR + +DL
Sbjct: 189 LKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLEDL 248

Query: 247 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRIIL 306
           +LRTRLL+ +A +++ LA     AV+L NQ+TTK  +    L  ALG+SW H+ T R+I 
Sbjct: 249 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAATIRLIF 308

Query: 307 YWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS--TSSNKRTK 345
           +W   +R+A L KSPS + ++ P+ +T +G R++  T+++ +T+
Sbjct: 309 HWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAVVTAASSQTE 350

[Close]

BLAST of Csor.00g255300 vs. ExPASy Swiss-Prot
Match: O43502 (DNA repair protein RAD51 homolog 3 OS=Homo sapiens OX=9606 GN=RAD51C PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.6e-66
Identity = 140/334 (41.92%), Postives = 208/334 (62.28%), Query Frame = 0


Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDRPDGSG 66
           P+S  +R KL+SAG+ T   L  V PS+L++E+ IS  EA E L+        ++P  +G
Sbjct: 18  PLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPRYAG 77

Query: 67  AIVNGAE-TAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQ 126
              +  + TA ++L +E     I T C+ LD++LGGG+   + TEI G PG+GKTQL +Q
Sbjct: 78  TSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQ 137

Query: 127 LAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQ 186
           LAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +    +  K     H+  
Sbjct: 138 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHL--QLIAEKHKGEEHRKA 197

Query: 187 IQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDL 246
           ++     +IL +I+YFR   YTE +A V  L  F++EH  V+++IVD + F FR + DDL
Sbjct: 198 LEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDL 257

Query: 247 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRIIL 306
           +LRTRLL+ +A +++ LA     AV+L NQ+TTK       L  ALG+SW H+ T R+I 
Sbjct: 258 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLIF 317

Query: 307 YWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 337
           +W+  +R A L KSPS +  +  + +  +G R++
Sbjct: 318 HWDRKQRLATLYKSPSQKECTVLFQIKPQGFRDT 349

[Close]

BLAST of Csor.00g255300 vs. ExPASy Swiss-Prot
Match: Q54PJ7 (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum OX=44689 GN=rad51c PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.5e-51
Identity = 107/250 (42.80%), Postives = 160/250 (64.00%), Query Frame = 0


Query: 88  ITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLGGKAVYID 147
           I T C+++D +L GG    ++TEI GVPGIGKT +  QL VN  IP   GG+ GKA+YID
Sbjct: 64  IITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYID 123

Query: 148 TEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQI 207
           TEGS+  +R  ++A   +  +    VL+K   T        + +L +I+Y+RV  Y E I
Sbjct: 124 TEGSYSCQRVREMATHLVNHLE--CVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEII 183

Query: 208 ALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAV 267
           +L++ L  F+ ++KDVK+I+VDS+T+ FR +F D+ LRTR L  +A  LM +A ++N AV
Sbjct: 184 SLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGLRTRSLLSLAQNLMNIATRYNLAV 243

Query: 268 VLLNQVTTKFAEGSFQLTLA--LGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAP 327
           V++NQVTTK +    +  L   LG+SW+H CT R++L+W   +R+ +L KSPS +S   P
Sbjct: 244 VVMNQVTTKISPNQKESILVPYLGESWTHICTYRMVLFWKQKQRFCHLYKSPSFKSCFTP 303

Query: 328 YSVTCRGIRN 336
           + +   GIR+
Sbjct: 304 FDIVEYGIRD 311

[Close]

BLAST of Csor.00g255300 vs. NCBI nr
Match: XP_022944720.1 (DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita moschata] >KAG6597206.1 DNA repair protein RAD51-like 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 671 bits (1730), Expect = 9.85e-243
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Csor.00g255300 vs. NCBI nr
Match: KAG7028675.1 (DNA repair protein RAD51-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 667 bits (1722), Expect = 1.63e-241
Identity = 345/346 (99.71%), Postives = 345/346 (99.71%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLK ASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKSASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Csor.00g255300 vs. NCBI nr
Match: XP_023540197.1 (DNA repair protein RAD51 homolog 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 665 bits (1715), Expect = 1.91e-240
Identity = 342/346 (98.84%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLAS SPSDLARELEISNNEAFE+LKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASASPSDLARELEISNNEAFEILKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDM+DYSVLVKKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMSDYSVLVKKNAM 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Csor.00g255300 vs. NCBI nr
Match: XP_022974137.1 (DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita maxima])

HSP 1 Score: 664 bits (1714), Expect = 2.71e-240
Identity = 342/346 (98.84%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFE+LKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGL GKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKF EGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Csor.00g255300 vs. NCBI nr
Match: XP_022944702.1 (DNA repair protein RAD51 homolog 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 664 bits (1714), Expect = 3.26e-240
Identity = 346/351 (98.58%), Postives = 346/351 (98.58%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLG-----IQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV 180
           QLG     IQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV
Sbjct: 121 QLGYGFLLIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV 180

Query: 181 KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF 240
           KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF
Sbjct: 181 KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF 240

Query: 241 RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS 300
           RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS
Sbjct: 241 RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS 300

Query: 301 CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 351

[Close]

BLAST of Csor.00g255300 vs. ExPASy TrEMBL
Match: A0A6J1FYV8 (DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449081 PE=4 SV=1)

HSP 1 Score: 671 bits (1730), Expect = 4.77e-243
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Csor.00g255300 vs. ExPASy TrEMBL
Match: A0A6J1I9G2 (DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111472731 PE=4 SV=1)

HSP 1 Score: 664 bits (1714), Expect = 1.31e-240
Identity = 342/346 (98.84%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFE+LKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGL GKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKF EGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 346

[Close]

BLAST of Csor.00g255300 vs. ExPASy TrEMBL
Match: A0A6J1FWA6 (DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449081 PE=4 SV=1)

HSP 1 Score: 664 bits (1714), Expect = 1.58e-240
Identity = 346/351 (98.58%), Postives = 346/351 (98.58%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLG-----IQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV 180
           QLG     IQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV
Sbjct: 121 QLGYGFLLIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV 180

Query: 181 KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF 240
           KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF
Sbjct: 181 KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF 240

Query: 241 RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS 300
           RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS
Sbjct: 241 RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS 300

Query: 301 CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 351

[Close]

BLAST of Csor.00g255300 vs. ExPASy TrEMBL
Match: A0A6J1FYW7 (DNA repair protein RAD51 homolog 3 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111449081 PE=4 SV=1)

HSP 1 Score: 661 bits (1706), Expect = 2.01e-239
Identity = 344/346 (99.42%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGGLGGKAVYI  EGSFMVERAVQIAEACIEDMTDYSVLVKKNAT
Sbjct: 121 QLGIQLAVNVQIPGAFGGLGGKAVYI--EGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD
Sbjct: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 344

[Close]

BLAST of Csor.00g255300 vs. ExPASy TrEMBL
Match: A0A6J1IGP1 (DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472731 PE=4 SV=1)

HSP 1 Score: 658 bits (1698), Expect = 4.34e-238
Identity = 342/351 (97.44%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFE+LKFASHGSRLD
Sbjct: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEILKFASHGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT
Sbjct: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120

Query: 121 QLG-----IQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV 180
           QLG     IQLAVNVQIPGAFGGL GKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV
Sbjct: 121 QLGYGFLLIQLAVNVQIPGAFGGLDGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLV 180

Query: 181 KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF 240
           KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF
Sbjct: 181 KKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHF 240

Query: 241 RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHS 300
           RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKF EGSFQLTLALGDSWSHS
Sbjct: 241 RQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFTEGSFQLTLALGDSWSHS 300

Query: 301 CTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 346
           CTNRIILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKMI
Sbjct: 301 CTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMI 351

[Close]

BLAST of Csor.00g255300 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 508.4 bits (1308), Expect = 4.4e-144
Identity = 254/346 (73.41%), Postives = 305/346 (88.15%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR+  I+  EAFE+LK A+      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSC--- 81

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
             +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLDN+LGGGI+  +VTEIGGVPGIGKT
Sbjct: 82  -CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           Q+GIQL+VNVQIP   GGLGGKA+YIDTEGSFMVERA+QIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
            +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KFI+E+KDVKV+IVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTKF+EGSFQL LALGDSWSHSCTNR+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRV 321

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS+SS+KR KM+
Sbjct: 322 ILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363

[Close]

BLAST of Csor.00g255300 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 494.2 bits (1271), Expect = 8.5e-140
Identity = 254/370 (68.65%), Postives = 304/370 (82.16%), Query Frame = 0


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLAR----------------------- 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR                       
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARGKFLLYPNLRRLESVARFSLIST 81

Query: 61  -ELEISNNEAFEVLKFASHGSRLDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLD 120
               I+  EAFE+LK A+        +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLD
Sbjct: 82  DNANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLD 141

Query: 121 NLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVER 180
           N+LGGGI+  +VTEIGGVPGIGKTQ+GIQL+VNVQIP   GGLGGKA+YIDTEGSFMVER
Sbjct: 142 NILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 201

Query: 181 AVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKF 240
           A+QIAEAC+EDM +Y+  + K+   +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KF
Sbjct: 202 ALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKF 261

Query: 241 ITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTK 300
           I+E+KDVKV+IVDS+TFHFRQ++DDLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTK
Sbjct: 262 ISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTK 321

Query: 301 FAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 347
           F+EGSFQL LALGDSWSHSCTNR+ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS
Sbjct: 322 FSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNS 381

[Close]

BLAST of Csor.00g255300 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 125.9 bits (315), Expect = 6.1e-29
Identity = 98/277 (35.38%), Postives = 142/277 (51.26%), Query Frame = 0


Query: 68  IVN-GAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQL 127
           IVN G  T  D L K + + +ITT C  LD+LLGGGI +S +TE  G    GKTQL   L
Sbjct: 87  IVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTL 146

Query: 128 AVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQI 187
            V  Q+P    G  GK  YIDTEG+F  +R V IAE                    +  +
Sbjct: 147 CVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGM 206

Query: 188 QPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNF---DDLA 247
            P  +L+NI Y R  +Y  Q  L+  L   ++E +  +++IVDS+   FR +F    +LA
Sbjct: 207 DPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRILIVDSIIALFRVDFTGRGELA 266

Query: 248 LRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSF---QLTLALGDSWSHSCTNRI 307
            R + L++M  +L+K+A++FN AV + NQV      G F       A G   +H+ T R+
Sbjct: 267 DRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRL 326

Query: 308 IL-YWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 337
           +     GD R   +  +P+L  A A + +T  GI ++
Sbjct: 327 LFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGIADA 342

[Close]

BLAST of Csor.00g255300 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-22
Identity = 96/328 (29.27%), Postives = 153/328 (46.65%), Query Frame = 0


Query: 15  KLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDRPDGSGAIVNGAET 74
           KL  AG  T+  +A     DL +   IS+ +  ++++ AS             +  G  +
Sbjct: 43  KLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVEAASK-----------LVPLGFTS 102

Query: 75  AWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPG 134
           A  +  + Q + +IT+   +LD +L GGI +  +TE+ G    GKTQL   L V  Q+P 
Sbjct: 103 ASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPM 162

Query: 135 AFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILEN 194
             GG  GKA+YID EG+F  +R +QIA+                    +  +   D+LEN
Sbjct: 163 DQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------------RFGLNGADVLEN 222

Query: 195 IFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD---DLALRTRLLSE 254
           + Y R  +   Q  L+      + E +   ++IVDS T  +R +F    +L+ R   L++
Sbjct: 223 VAYARAYNTDHQSRLLLEAASMMIETR-FALLIVDSATALYRTDFSGRGELSARQMHLAK 282

Query: 255 MALKLMKLAKKFNSAVVLLNQVTTKFAEGSF-----QLTLALGDSWSHSCTNRIIL-YWN 314
               L KLA +F  AVV+ NQV  +  +GS      Q     G+  +H+ T R+ L    
Sbjct: 283 FLRSLQKLADEFGVAVVITNQVVAQ-VDGSALFAGPQFKPIGGNIMAHATTTRLALRKGR 337

Query: 315 GDERYAYLEKSPSLRSASAPYSVTCRGI 334
            +ER   +  SP L  A A + ++  G+
Sbjct: 343 AEERICKVISSPCLPEAEARFQISTEGV 337

[Close]

BLAST of Csor.00g255300 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-19
Identity = 68/212 (32.08%), Postives = 108/212 (50.94%), Query Frame = 0


Query: 70  NGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVN 129
           NG     ++L +     ++TT C  LD  L GGI+   +TEI    G GKTQL +QL++ 
Sbjct: 3   NGKIKPENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLC 62

Query: 130 VQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPK 189
            Q+P + GGL G ++Y+ +E  F   R  Q++       ++ S+    N  P        
Sbjct: 63  TQLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTF--HQSNPSIYANYNDNP-------- 122

Query: 190 DILENIFYFRVCSYTEQIALVNYLDKFITEHK---DVKVIIVDSVTFHFRQNFD----DL 249
              +++F   V S      ++  +D F+   K    +K+I++DSV   FR  FD    DL
Sbjct: 123 --CDHVFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDL 182

Query: 250 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVT 275
             R+ L  +++ KL +LA KF+ A+V+ NQVT
Sbjct: 183 KKRSSLFFKISGKLKQLASKFDLAIVITNQVT 202

The following BLAST results are available for this feature:

BLAST of Csor.00g255300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXF0	6.2e-143	73.41	DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=RAD51C PE=...	[more]
Q8R2J9	1.7e-71	42.69	DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus OX=10029 GN=RAD51C PE=2...	[more]
Q924H5	1.2e-69	41.57	DNA repair protein RAD51 homolog 3 OS=Mus musculus OX=10090 GN=Rad51c PE=2 SV=1	[more]
O43502	3.6e-66	41.92	DNA repair protein RAD51 homolog 3 OS=Homo sapiens OX=9606 GN=RAD51C PE=1 SV=1	[more]
Q54PJ7	1.5e-51	42.80	DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum OX=44689 GN=rad51...	[more]

BLAST of Csor.00g255300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944720.1	9.85e-243	100.00	DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita moschata] >KAG6597206.1...	[more]
KAG7028675.1	1.63e-241	99.71	DNA repair protein RAD51-like 3, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_023540197.1	1.91e-240	98.84	DNA repair protein RAD51 homolog 3 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022974137.1	2.71e-240	98.84	DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita maxima]	[more]
XP_022944702.1	3.26e-240	98.58	DNA repair protein RAD51 homolog 3 isoform X1 [Cucurbita moschata]	[more]

BLAST of Csor.00g255300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYV8	4.77e-243	100.00	DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I9G2	1.31e-240	98.84	DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FWA6	1.58e-240	98.58	DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1FYW7	2.01e-239	99.42	DNA repair protein RAD51 homolog 3 isoform X4 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1IGP1	4.34e-238	97.44	DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Csor.00g255300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45280.1	4.4e-144	73.41	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	8.5e-140	68.65	RAS associated with diabetes protein 51C	[more]
AT3G22880.1	6.1e-29	35.38	DNA repair (Rad51) family protein	[more]
AT5G20850.1	1.1e-22	29.27	RAS associated with diabetes protein 51	[more]
AT5G57450.1	2.0e-19	32.08	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.150.20		coord: 11..55 e-value: 2.4E-5 score: 26.4
None	No IPR available	PANTHER	PTHR46239	DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C	coord: 1..343
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 68..337 e-value: 4.9E-77 score: 260.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 86..334
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 1..339 e-value: 6.5E-93 score: 309.2
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 71..335 e-value: 9.8E-47 score: 159.4
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 84..273 score: 56.178841
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 88..334 e-value: 1.65289E-96 score: 284.091
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	47794	Rad51 N-terminal domain-like	coord: 6..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g255300.m01	Csor.00g255300.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007143	female meiotic nuclear division
biological_process	GO:0007140	male meiotic nuclear division
biological_process	GO:0000707	meiotic DNA recombinase assembly
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0016444	somatic cell DNA recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex
cellular_component	GO:0033065	Rad51C-XRCC3 complex
cellular_component	GO:0005657	replication fork
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0008821	crossover junction endodeoxyribonuclease activity
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000166	nucleotide binding