Csor.00g255170 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g255170
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Calcium-binding EF hand family protein
Location	Csor_Chr06: 8745128 .. 8748773 (+)
RNA-Seq Expression	Csor.00g255170
Synteny	Csor.00g255170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAACTTGCATTCCGGGAAAGGAAGGTCGCTTTATTCCAAGTTTCCTTCCGAACAGGAAAAGGAAATGTGTGGCAGAAGCGGTGTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGATACGAAACCTCAGGAAATGATAAATTTCGTTATGGTTGCTACTAAGGCGGGCATCTCGATCTTCCTTTACTCGAAGAACTGATTTCAATCACAGTTGGGGGCTGCTTTACGAGGTCTGTGATCTTCAATCACCGTCGCTGCCGTCTGTCTAGTATGGGACAAATCTTGGGGAGATTTGGAGGTGAATTGACCTAACCTCACTTTTCAAATCCTTCGGTTTTGAATTCGTTTTCAGTTTTCTGTTTGGATCCGTCGATAAATTGATTAACGGAACAAGCGAAATGGCGAATGCGTAGTCACAGAGTAGATTATACCGATTTATTCTTTAAAAAGAGATCGATCTTATTAGTGATATGCGATTAACCTACAATTCTTCCTCGTTACTGATATTGTCTTAGACTTCAACCGATGAACTTATCGGTTTTGTTTCTTGTTTGGAGTGTTAGATTAGCTGATTTGTGCTGTCTCTGTGGATTTGATACCGTGTCTGCTTGCAATTGAGGGAGACAGACAGGATTTTTTATAAGATTAGAGACGGAGCGATGATTAATTGAAATATTTTTAAGCTTTTGTCCTTTCTGTTGCAGGAGAAGAATGGAGGAAGAAGAAGTTGAAGACGATATCAGACAGGATATTCGAGAAGATAAAAAAAAACAAATCAGCTGAGGAGGAGCTGTCATTTGAAGAATTATATATTGCCACGTTACTTGTGTTCAAGTAAGAAGCTCTATTATTTACTTCACATTTTTCCTGCTCCAATTTTTTTGTTGCTCATTCGTTTGTTTATTTATTTATTTACAACTTGGTGTGGGATATCACTCTTTATATTGTGTTCATGATCCATTGCTTTGTGAGAGAATTTGCAAAACCCATGACTGACGGACAGTAAGAATTGTAAGTTGGTTTGGCAAATTTCCGTTCCTTATTTCTTGGTCCTCTAACTAAGAGAATAGAAATGTGTTTGGTAATAATTTCTTGTTCTTCCATATTGTAAATTTTTAGACAAAATTATCACATAAAAACGATTTGTTTTGAATGCTAGGGAAGATGCTGAAGAGGGTGAATTGTGATTTGGGCTAGGGAAGACTCTGAAGAGGGTGGATTGTGAGATCCCATGTCGATTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGCCGCGATTTAAAACTTTGAGAGGAAGCCCGGGAGGAAAACCTAAAGAGGACACTATCTCTAGTAGTGGATTTGGGCTAGGGAAGACGCTGAAGAGGGTGGATTGTGAGATCCCATGTCGATTGGGGAGAAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTTTCCCTTAGCATACGAGTTTTAAAACCTTGAGAGGAAGCCCAGTAGGGAAAACCTAAAAAGGACACTATCTCTAGTAGTGGATTTGGGCTAGGGAAGACGCTGAAGAGGGTGGATTGTGAGATCCCACGTCGATTGGAAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAACCTTTCCCCTAGCATACGGGTTTTAAAACCTTGAGGGGAAGCCCATGAGGGAAAACCTAAAGATGACACTATCTCTAGTAGTGGATTTGGGCTCGTAGATATAATGTTTATTATACATTTTACGAGTCAAAATAATAATCTGACGTTTTTTATTTGTTCTTTTTGAAAAAATTGAGAAAAACTTGATCTTGTTGAAGAAATGAGAAACAGAAACACTTATCAATTGTCAATGTTCTTCAAAATTTGGTAATAGAAAACAGGAAACTAGAAAAATAAATGTGATTGAACAAGCCCTGAATTTTCAAACTGGGCTTGAACTTTTCATCCTTGGAGATATCTCTTGAACATCTCAAGCTTTTGGTGATCTGATGAGGCATCTGTGAACTTGGCTTAACCTGAATAAAAACTTATGATGCAGTGATATTAATAAGCTGTTCTCTGGCACACATCTTGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAGCGGTACTCTGTTTATACAATTTATTACTCTGTTTATACAATTTATTACAAAGCTTTAACGATATGAAAAAGTGGCATCTGTTGATGATTGGGAAAATCTAAACTCGTTGGATATTAATGCCTAACCTTGTTCACTTTAGGTCTAATGCTCAGTAATTCTTGTTCTTTACTTGGTGCTAATGAACTTGGCTGAAGTATGGCTATCAACTTGCATGTGGTGCTGCTTGTTTTATTTTCCTATTCCTATTTTTGTCATGTTCGTCAATAATTTGTGGCTTTATTGAATTGTAGTAGCTTCCCTGCTCTTCCTGTTGCCATGTTCTTCAAAAAAAGTGGCCACTTTTGTTAACAATTTTGTTTTTATGCTTGTTTTCTTTCGGTTTCTTTACTGTGTTTTTCATCTTCCTTAGAGAAACTAGTCAAATTCCAAAACGAAAAGTGGGTTCTCTAAAACTACTTTTTTTCGGCCTGATTATTTGATTTGTTGGTGTTGAGTTTTTGAAAAGTAAGCTTATAGATCTGTAACCGCCCAAGCCCAAGCCTAAACCCACTGCCAATAGATATTGTCTGTTTTGGCCCCTTACGGTTTTTAAAATGCATTTGCTAGGGAGGAGTTTTCACACCCTTATAAAGAATGCTTCGTTCCCCTCTCCAACCAATGTGGAATCTCACGAGATCTTTACTTCTTTACTTCTTTTGTGTCTTTTTTCTTTTTAATTTTCAAAATCCAAGTCAAGTTTTGAAAATTGAAAATAGTAGTGTTTTTAAAACCATGTTTTTGTTTTTAGAATTAGACTAACAATTCAAATGTATCTTTTAAAAAGGGTTAAAATCATCGTAAATAGATAAGGAAACAAACATAAATTTTATAAACCAAATAGTTATAGAATAGAACTTTAGTTTTAAGAACGTAAGTAAGTAGATAGCAAAAAATACGGATGTGGAAGTAATGTTTATAAGCTTAATTCTAAAAAAAACCAAATGTTATGAACTTGCCAACAACTAATATATGTAAACACACTTCAAATTTCTGTGTTCATATACCTGCTGATCAACTTAAGCATGACAACTTCAAATTTCTGTGTTCATATACCTGCTGATCAACTTAAGCATGCCAACTTCAAATTTTTGTGTTCATATACCTGCTGATCAACTTAAGCATGCCAACTTCAAATTTCTGTGTTCATATACCTGCTGATCAACTTAAGCATGCTTGTGGCTCGTTGTATTATATCAGGTACACGATACGAACAAGAACACAAAAATCGACAAAGGAGAATTTTTTGGTTTTATGGAGGAGTTGACATCTGAAACGTTCAAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACGATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCATCCGCTTCTTAAATGA

mRNA sequence

ATGGATAACTTGCATTCCGGGAAAGGAAGGTCGCTTTATTCCAAGTTTCCTTCCGAACAGGAAAAGGAAATGTGTGGCAGAAGCGGCGGGCATCTCGATCTTCCTTTACTCGAAGAACTGATTTCAATCACAGTTGGGGGCTGCTTTACGAGGTCTGTGATCTTCAATCACCGTCGCTGCCGTCTGTCTAGTATGGGACAAATCTTGGGGAGATTTGGAGGAGAAGAATGGAGGAAGAAGAAGTTGAAGACGATATCAGACAGGATATTCGAGAAGATAAAAAAAAACAAATCAGCTGAGGAGGAGCTGTCATTTGAAGAATTATATATTGCCACGTTACTTGTGTTCAATGATATTAATAAGCTGTTCTCTGGCACACATCTTGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAGCGGTACACGATACGAACAAGAACACAAAAATCGACAAAGGAGAATTTTTTGGTTTTATGGAGGAGTTGACATCTGAAACGTTCAAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACGATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCATCCGCTTCTTAAATGA

Coding sequence (CDS)

ATGGATAACTTGCATTCCGGGAAAGGAAGGTCGCTTTATTCCAAGTTTCCTTCCGAACAGGAAAAGGAAATGTGTGGCAGAAGCGGCGGGCATCTCGATCTTCCTTTACTCGAAGAACTGATTTCAATCACAGTTGGGGGCTGCTTTACGAGGTCTGTGATCTTCAATCACCGTCGCTGCCGTCTGTCTAGTATGGGACAAATCTTGGGGAGATTTGGAGGAGAAGAATGGAGGAAGAAGAAGTTGAAGACGATATCAGACAGGATATTCGAGAAGATAAAAAAAAACAAATCAGCTGAGGAGGAGCTGTCATTTGAAGAATTATATATTGCCACGTTACTTGTGTTCAATGATATTAATAAGCTGTTCTCTGGCACACATCTTGATCCGCCTTCAAGGGAACATTTCAAACAACTCATAGCGGTACACGATACGAACAAGAACACAAAAATCGACAAAGGAGAATTTTTTGGTTTTATGGAGGAGTTGACATCTGAAACGTTCAAATCAGTGAGCCAGAAATTAGTCCTCACTTTGGTGATTGCACCAACGATCGCAGTGTTCACAAAGAAACGTACTGAAGGAGTTCCAGGCGTTGGAAAACTGGTGCAAAAACTCCCCTCTTCAGCATATGCTTCCATTATCACTCTTGCTGCTGTGCTGTTTCAGAGCTCTCAGCATCCGCTTCTTAAATGA

Protein sequence

MDNLHSGKGRSLYSKFPSEQEKEMCGRSGGHLDLPLLEELISITVGGCFTRSVIFNHRRCRLSSMGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK

Homology

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BLAST of Csor.00g255170 vs. NCBI nr
Match: KAG6597219.1 (hypothetical protein SDJN03_10399, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453 bits (1165), Expect = 1.80e-160
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MDNLHSGKGRSLYSKFPSEQEKEMCGRSGGHLDLPLLEELISITVGGCFTRSVIFNHRRC 60
           MDNLHSGKGRSLYSKFPSEQEKEMCGRSGGHLDLPLLEELISITVGGCFTRSVIFNHRRC
Sbjct: 1   MDNLHSGKGRSLYSKFPSEQEKEMCGRSGGHLDLPLLEELISITVGGCFTRSVIFNHRRC 60

Query: 61  RLSSMGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDIN 120
           RLSSMGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDIN
Sbjct: 61  RLSSMGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDIN 120

Query: 121 KLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLV 180
           KLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLV
Sbjct: 121 KLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLV 180

Query: 181 IAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231
           IAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK
Sbjct: 181 IAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231

[Close]

BLAST of Csor.00g255170 vs. NCBI nr
Match: KAG7028690.1 (hypothetical protein SDJN02_09871, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363 bits (933), Expect = 3.31e-125
Identity = 203/244 (83.20%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 1   MDNLHSGKGRSLYSKFPSEQEKEM-CGRSGGHLDLPLLEELISITVGGCFTRSVIFNH-- 60
           MDNLHSGKGRSLYSKFPSEQEKEM   RS                    FTR   FNH  
Sbjct: 1   MDNLHSGKGRSLYSKFPSEQEKEMRASRSS-------------------FTRRTDFNHGW 60

Query: 61  ----RRCRL------SSMGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEE 120
                 C L      SSMGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEE
Sbjct: 61  GLLYEVCDLQSPSLPSSMGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEE 120

Query: 121 LYIATLLVFNDINKLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSET 180
           LYIATLLVFNDINKLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSET
Sbjct: 121 LYIATLLVFNDINKLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSET 180

Query: 181 FKSVSQKLVLTLVIAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQH 231
           FKSVSQKLVLTLVIAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQH
Sbjct: 181 FKSVSQKLVLTLVIAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQH 225

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BLAST of Csor.00g255170 vs. NCBI nr
Match: XP_022950463.1 (uncharacterized protein LOC111453554 [Cucurbita moschata])

HSP 1 Score: 322 bits (825), Expect = 1.22e-109
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 65  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 124
           MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS
Sbjct: 1   MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 60

Query: 125 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 184
           GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT
Sbjct: 61  GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 120

Query: 185 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231
           IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK
Sbjct: 121 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 167

[Close]

BLAST of Csor.00g255170 vs. NCBI nr
Match: XP_023540969.1 (uncharacterized protein LOC111801195 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276 bits (706), Expect = 1.55e-91
Identity = 148/167 (88.62%), Postives = 153/167 (91.62%), Query Frame = 0


Query: 65  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 124
           MGQILGRFGG+EWR KKLKTISDRIF+KIKK  S +EELSFEELYIATLLVFNDINKL S
Sbjct: 1   MGQILGRFGGKEWRIKKLKTISDRIFDKIKKQ-SDKEELSFEELYIATLLVFNDINKLLS 60

Query: 125 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 184
           G+H DPPSREHFKQLI  HD NKN KID  EFFGFM ELTSETF+SVSQKLVLTLVIAPT
Sbjct: 61  GSHHDPPSREHFKQLIKEHDRNKNEKIDNEEFFGFMMELTSETFQSVSQKLVLTLVIAPT 120

Query: 185 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231
           IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQ PLLK
Sbjct: 121 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQQPLLK 166

[Close]

BLAST of Csor.00g255170 vs. NCBI nr
Match: XP_022974167.1 (uncharacterized protein LOC111472754 [Cucurbita maxima] >XP_022974169.1 uncharacterized protein LOC111472754 [Cucurbita maxima])

HSP 1 Score: 270 bits (690), Expect = 4.21e-89
Identity = 143/167 (85.63%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 65  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 124
           MGQ+LGRFGG++WR KKLK IS+RIF+KIKK  S +EELSFEELYIATLLVFNDINKL S
Sbjct: 1   MGQVLGRFGGKDWRIKKLKMISNRIFDKIKKQ-SDKEELSFEELYIATLLVFNDINKLLS 60

Query: 125 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 184
           G+H DPPSREHFKQLI  HD+NKN KID  EFFGFM ELTSETFKSVSQKLVLTLVIAPT
Sbjct: 61  GSHHDPPSREHFKQLITAHDSNKNEKIDNEEFFGFMMELTSETFKSVSQKLVLTLVIAPT 120

Query: 185 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231
           IAVFTKKRTEG PGVGKLVQKLPSSAYASIITLAAVLFQSS  PLLK
Sbjct: 121 IAVFTKKRTEGFPGVGKLVQKLPSSAYASIITLAAVLFQSSHQPLLK 166

[Close]

BLAST of Csor.00g255170 vs. ExPASy TrEMBL
Match: A0A6J1GEY5 (uncharacterized protein LOC111453554 OS=Cucurbita moschata OX=3662 GN=LOC111453554 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 5.89e-110
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 65  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 124
           MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS
Sbjct: 1   MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 60

Query: 125 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 184
           GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT
Sbjct: 61  GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 120

Query: 185 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231
           IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK
Sbjct: 121 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 167

[Close]

BLAST of Csor.00g255170 vs. ExPASy TrEMBL
Match: A0A6J1IGT6 (uncharacterized protein LOC111472754 OS=Cucurbita maxima OX=3661 GN=LOC111472754 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 2.04e-89
Identity = 143/167 (85.63%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 65  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 124
           MGQ+LGRFGG++WR KKLK IS+RIF+KIKK  S +EELSFEELYIATLLVFNDINKL S
Sbjct: 1   MGQVLGRFGGKDWRIKKLKMISNRIFDKIKKQ-SDKEELSFEELYIATLLVFNDINKLLS 60

Query: 125 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 184
           G+H DPPSREHFKQLI  HD+NKN KID  EFFGFM ELTSETFKSVSQKLVLTLVIAPT
Sbjct: 61  GSHHDPPSREHFKQLITAHDSNKNEKIDNEEFFGFMMELTSETFKSVSQKLVLTLVIAPT 120

Query: 185 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231
           IAVFTKKRTEG PGVGKLVQKLPSSAYASIITLAAVLFQSS  PLLK
Sbjct: 121 IAVFTKKRTEGFPGVGKLVQKLPSSAYASIITLAAVLFQSSHQPLLK 166

[Close]

BLAST of Csor.00g255170 vs. ExPASy TrEMBL
Match: A0A6J1D109 (uncharacterized protein LOC111016024 OS=Momordica charantia OX=3673 GN=LOC111016024 PE=4 SV=1)

HSP 1 Score: 203 bits (516), Expect = 2.90e-62
Identity = 118/213 (55.40%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 13  YSKFPSEQEKEMCGRSGGHLDLPLLEELISITVGGCFTRSVIFNHRRCRLSSMGQILGRF 72
           Y  F +++ +  C   GG+ DLPL   L   TV  CF   VIF++RR   S MGQIL + 
Sbjct: 8   YKIFANDKFRYRCCY-GGYPDLPLPGAL---TV--CFAGPVIFSYRRSLPSIMGQILDKI 67

Query: 73  GGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFSGTHLDPPS 132
           GG++WR  +++ ISD+IF KIK N S +  LSFE+LYIATLLV+N+INK   G H DPPS
Sbjct: 68  GGKQWRDAQMRKISDKIFNKIK-NHSDKVNLSFEDLYIATLLVYNEINKRLPGPHHDPPS 127

Query: 133 REHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPTIAVFTKKR 192
           +E  ++LI   D N + +ID+ EF  F+  LTS+T  +VSQ LVLTLV+APT+AV TKK 
Sbjct: 128 KERVRELIKESDLNMDQEIDREEFMKFILLLTSDTVITVSQGLVLTLVVAPTVAVVTKKS 187

Query: 193 TEGVPGVGKLVQKLPSSAYASIITLAAVLFQSS 225
           TEGVPGVGKLVQKLP+S YAS+ITLAA+ FQ++
Sbjct: 188 TEGVPGVGKLVQKLPASVYASLITLAALSFQNA 213

[Close]

BLAST of Csor.00g255170 vs. ExPASy TrEMBL
Match: A0A6J1ITL1 (uncharacterized protein LOC111479803 OS=Cucurbita maxima OX=3661 GN=LOC111479803 PE=4 SV=1)

HSP 1 Score: 193 bits (490), Expect = 4.60e-59
Identity = 100/167 (59.88%), Postives = 131/167 (78.44%), Query Frame = 0


Query: 65  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 124
           M + LGRFGG+EWR ++L+ ISDRIF+ I   K   ++LSFE+LYIATLLV+NDINK   
Sbjct: 1   MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKK---DKLSFEDLYIATLLVYNDINKRLP 60

Query: 125 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 184
            +HLDPP+ E F+QL+  +D N++ KI + EF GF+  LTS+ F S+S +L+LTLVIAPT
Sbjct: 61  ISHLDPPTEERFRQLMKENDWNEDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPT 120

Query: 185 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231
           +AV TK+ TEG+P VG LVQKLPSSAYA ++TLAA +FQ+SQ P+LK
Sbjct: 121 VAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK 164

[Close]

BLAST of Csor.00g255170 vs. ExPASy TrEMBL
Match: A0A6J1EC16 (uncharacterized protein LOC111431834 OS=Cucurbita moschata OX=3662 GN=LOC111431834 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 6.53e-59
Identity = 99/167 (59.28%), Postives = 131/167 (78.44%), Query Frame = 0


Query: 65  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 124
           M + LGRFGG+EWR ++L+ ISDRIF+ I   K   ++LSFE+LYIATLLV+NDINK   
Sbjct: 1   MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKK---DKLSFEDLYIATLLVYNDINKRLP 60

Query: 125 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 184
            +HLDPP+ E F++LI  +D N++ KI + EF GF+  LTS+ F S+S +L+LTLVIAPT
Sbjct: 61  ISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPT 120

Query: 185 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQSSQHPLLK 231
           +AV TK+ TEG+P +G LVQKLPSSAYA ++TLAA +FQ+SQ P+LK
Sbjct: 121 VAVVTKRSTEGIPVIGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK 164

[Close]

BLAST of Csor.00g255170 vs. TAIR 10
Match: AT1G64850.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-40
Identity = 80/160 (50.00%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 65  MGQILGRFGGEEWRKKKLKTISDRIFEKIKKNKSAEEELSFEELYIATLLVFNDINKLFS 124
           MGQ+  +  G+EWR K+++ I DR+F++ K  ++    L+FEELYIA LLV+NDINK   
Sbjct: 1   MGQVFNKLRGKEWRHKQVQAICDRVFDRFKM-QTGRANLTFEELYIAVLLVYNDINKRLP 60

Query: 125 GTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEELTSETFKSVSQKLVLTLVIAPT 184
           G H DPPS++    ++   D N + ++D+ EF  F+E++T+ETF  VSQ L++ L++APT
Sbjct: 61  GPHFDPPSKDLVNSIMTDCDINLDGELDREEFVKFIEQITAETFNVVSQGLIIALIVAPT 120

Query: 185 IAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVLFQS 225
           +A+ TKK TEGVPGVGK+VQKLP+S YAS++TLA +   S
Sbjct: 121 VAIATKKATEGVPGVGKVVQKLPTSIYASLVTLAVMWVNS 159

[Close]

BLAST of Csor.00g255170 vs. TAIR 10
Match: AT4G37445.1 (BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 6.3e-06
Identity = 29/118 (24.58%), Postives = 59/118 (50.00%), Query Frame = 0


Query: 104 SFEELYIATLLVFNDINKLFSGTHLDPPSREHFKQLIAVHDTNKNTKIDKGEFFGFMEEL 163
           +F++ ++A L +FN+ N    G H D P+ +  K   A     K+ +  K  F  FM + 
Sbjct: 36  NFDDFHVAVLDIFNNFNSALPGRHFDFPTPDQIKVCFARWKEAKDEEEKKKLFIEFMSKS 95

Query: 164 TSETFKSVSQKLVLTLVIAPTIAVFTKKRTEGVPGVGKLVQKLPSSAYASIITLAAVL 222
              +   +    ++T +++P  A+  K+  E VP + KL++ +P   +   +T+ A++
Sbjct: 96  VKPS--KLDDVTMITGIVSPPAAMAAKRAGENVPQL-KLIKLIPDVIFVPTVTILAIV 150

The following BLAST results are available for this feature:

BLAST of Csor.00g255170 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g255170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597219.1	1.80e-160	100.00	hypothetical protein SDJN03_10399, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7028690.1	3.31e-125	83.20	hypothetical protein SDJN02_09871, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022950463.1	1.22e-109	100.00	uncharacterized protein LOC111453554 [Cucurbita moschata]	[more]
XP_023540969.1	1.55e-91	88.62	uncharacterized protein LOC111801195 [Cucurbita pepo subsp. pepo]	[more]
XP_022974167.1	4.21e-89	85.63	uncharacterized protein LOC111472754 [Cucurbita maxima] >XP_022974169.1 uncharac...	[more]

BLAST of Csor.00g255170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEY5	5.89e-110	100.00	uncharacterized protein LOC111453554 OS=Cucurbita moschata OX=3662 GN=LOC1114535...	[more]
A0A6J1IGT6	2.04e-89	85.63	uncharacterized protein LOC111472754 OS=Cucurbita maxima OX=3661 GN=LOC111472754...	[more]
A0A6J1D109	2.90e-62	55.40	uncharacterized protein LOC111016024 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1ITL1	4.60e-59	59.88	uncharacterized protein LOC111479803 OS=Cucurbita maxima OX=3661 GN=LOC111479803...	[more]
A0A6J1EC16	6.53e-59	59.28	uncharacterized protein LOC111431834 OS=Cucurbita moschata OX=3662 GN=LOC1114318...	[more]

BLAST of Csor.00g255170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64850.1	1.0e-40	50.00	Calcium-binding EF hand family protein	[more]
AT4G37445.1	6.3e-06	24.58	BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family prote...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 13..185 e-value: 2.3E-6 score: 29.2
None	No IPR available	PANTHER	PTHR11639:SF133	CALCIUM-BINDING EF HAND PROTEIN	coord: 69..227
None	No IPR available	PANTHER	PTHR11639	S100 CALCIUM-BINDING PROTEIN	coord: 69..227
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 131..166 score: 10.914899
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 88..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g255170.m01	Csor.00g255170.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0048306	calcium-dependent protein binding
molecular_function	GO:0005509	calcium ion binding