Csor.00g255120 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g255120
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Cyclin
Location	Csor_Chr06: 8785362 .. 8786513 (+)
RNA-Seq Expression	Csor.00g255120
Synteny	Csor.00g255120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGCTAGAGGACCCGACTGTGATGCCGAAACTGATCAATTTTCTCTCTTGTCTTCTTCAAAGAGTGGCTGAATCCAACGATCAAAACCTCTCTGTTCATCTTCAACATCACAAAATCTCAGCCTTCCATGGCTTAACTCGTCCCGCCATTTCAATCCAAAGCTACTTGGATAGGATCTTTAAGTACGCCAATTGCAGTCCCTGTTGCTTCGTCGTTGCCTACATTTATCTCGATCGCTTTGTTCAAAGGCAGCCCTCGCTGCCCATCAATTCCTTCAATGTTCATCGCTTGCTCATCACTAGCGTTCTTGTTTCTGCTAAATTTATGGATGATACGTGAGTTTCTTAATCGTCTTGAAAATGTGGGATTTGATTTGGGTTTGTTTTCGTTTTTTTTACCTTTTCAAGTATGCCTGCAAGGTTACTGATGAAATGCCTCAATGAGTTCTGTTTTTTTAATGTCGGATAGGGGTTTTGAGACGTCGATTTGGCTTGCTAATTATGTTTTTTTAAACTGAAATTGTGGTTTTTGATTGACGAAAACTTGATGTTTTTAAAGATTCTTTCATCTCAAATTTCTATGATCTTTATATGGGTTTGTTTTGATGAATCTGATGCTATGAGCAACTTGTTTGTTTTTTGGGAATCTTCTTGTCATTGTTCATCATTTCATCATATACTCGCCGAATCTCTCATTCTCAACAGCTATGCAGCCAACAAAAAAGCATAGTGAACCAACCATGAATTTACTTTACAAATTTGCTTCCATAAACAGCATTTTCCCCAAAAACATCAAAAAGGGGCTTTGAATTTGGGCAATTTGAGTTGAAATGTGGGCAATTTGTTATGCTTATTCAGGTACTATAACAATGCATATTATGCAAAAGTGGGAGGGATCAGCACAGCGGAAATAAACTTTCTTGAAGTGGATTTCTTGTTTGGTTTGGGCTTTCACTTGAATGTCACTCCCAACACTTTCCATTCTTATTACTCATATCTTCAAAGACAAATGCTTCTGCTTCAACCTCCTCTCAGTAGCGCTTCTGCAAAATCAGAGCTGATTCTTACAGCCAGAGCTCTGAAACCCCACTTTTGTTTTGATGAAGATGAAGCTTCCCATAAGAAGCAACAGCTTGCAGCTGTTTGA

mRNA sequence

ATGGCGGAGCTAGAGGACCCGACTGTGATGCCGAAACTGATCAATTTTCTCTCTTGTCTTCTTCAAAGAGTGGCTGAATCCAACGATCAAAACCTCTCTGTTCATCTTCAACATCACAAAATCTCAGCCTTCCATGGCTTAACTCGTCCCGCCATTTCAATCCAAAGCTACTTGGATAGGATCTTTAAGTACGCCAATTGCAGTCCCTGTTGCTTCGTCGTTGCCTACATTTATCTCGATCGCTTTGTTCAAAGGCAGCCCTCGCTGCCCATCAATTCCTTCAATGTTCATCGCTTGCTCATCACTAGCGTTCTTGTTTCTGCTAAATTTATGGATGATACGTACTATAACAATGCATATTATGCAAAAGTGGGAGGGATCAGCACAGCGGAAATAAACTTTCTTGAAGTGGATTTCTTGTTTGGTTTGGGCTTTCACTTGAATGTCACTCCCAACACTTTCCATTCTTATTACTCATATCTTCAAAGACAAATGCTTCTGCTTCAACCTCCTCTCAGTAGCGCTTCTGCAAAATCAGAGCTGATTCTTACAGCCAGAGCTCTGAAACCCCACTTTTGTTTTGATGAAGATGAAGCTTCCCATAAGAAGCAACAGCTTGCAGCTGTTTGA

Coding sequence (CDS)

ATGGCGGAGCTAGAGGACCCGACTGTGATGCCGAAACTGATCAATTTTCTCTCTTGTCTTCTTCAAAGAGTGGCTGAATCCAACGATCAAAACCTCTCTGTTCATCTTCAACATCACAAAATCTCAGCCTTCCATGGCTTAACTCGTCCCGCCATTTCAATCCAAAGCTACTTGGATAGGATCTTTAAGTACGCCAATTGCAGTCCCTGTTGCTTCGTCGTTGCCTACATTTATCTCGATCGCTTTGTTCAAAGGCAGCCCTCGCTGCCCATCAATTCCTTCAATGTTCATCGCTTGCTCATCACTAGCGTTCTTGTTTCTGCTAAATTTATGGATGATACGTACTATAACAATGCATATTATGCAAAAGTGGGAGGGATCAGCACAGCGGAAATAAACTTTCTTGAAGTGGATTTCTTGTTTGGTTTGGGCTTTCACTTGAATGTCACTCCCAACACTTTCCATTCTTATTACTCATATCTTCAAAGACAAATGCTTCTGCTTCAACCTCCTCTCAGTAGCGCTTCTGCAAAATCAGAGCTGATTCTTACAGCCAGAGCTCTGAAACCCCACTTTTGTTTTGATGAAGATGAAGCTTCCCATAAGAAGCAACAGCTTGCAGCTGTTTGA

Protein sequence

MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDRIFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAYYAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSELILTARALKPHFCFDEDEASHKKQQLAAV

Homology

[Close]

BLAST of Csor.00g255120 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.9e-75
Identity = 142/205 (69.27%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELE+P+VM KLI FLS LL+RVAESND    V  Q  ++S FHGL+RP I+IQSYL+R
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSP CFVVAY+YLDRF  RQPSLPINSFNVHRLLITSV+V+AKF+DD YYNNAY
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180
           YAKVGGIST E+NFLE+DFLFGLGF LNVTPNTF++Y+SYLQ++M LLQP        S 
Sbjct: 121 YAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPSSR 180

Query: 181 LILTARALKPHFCFDEDEASHKKQQ 206
            ++T         F++DEASH+KQQ
Sbjct: 181 SLIT---------FNDDEASHQKQQ 196

[Close]

BLAST of Csor.00g255120 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-57
Identity = 125/218 (57.34%), Postives = 162/218 (74.31%), Query Frame = 0


Query: 3   ELEDP--TVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 62
           +L++P   +MP ++  +S LLQRV+E+ND NLS   Q  K S+F G+T+P+ISI+SYL+R
Sbjct: 13  DLQEPLAEIMPSVLTAMSYLLQRVSETND-NLS---QKQKPSSFTGVTKPSISIRSYLER 72

Query: 63  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 122
           IF+YANCS  C++VAYIYLDRFV++QP LPINSFNVHRL+ITSVLVSAKFMDD  YNN Y
Sbjct: 73  IFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEY 132

Query: 123 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQM--------LLLQPPL 182
           YAKVGGIS  E+N LE+DFLFG+GF LNVT +TF++Y  +LQR+M        L L+P  
Sbjct: 133 YAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMKSLFLEPSS 192

Query: 183 SSASAKSELILTARALKPHFCFDEDEAS--HKKQQLAA 209
              S+K++L+     + PH   +ED  S  H K+QLAA
Sbjct: 193 FKISSKTKLV-----MYPH---EEDSLSTHHNKKQLAA 218

[Close]

BLAST of Csor.00g255120 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.5e-54
Identity = 101/159 (63.52%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 9   VMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDRIFKYANCS 68
           +MP +I  +S LLQRV+E+ND       +H +ISAF+ +T+P+ISI+SY++RIFKYA+CS
Sbjct: 19  IMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCS 78

Query: 69  PCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAYYAKVGGIS 128
             C++VAYIYLDRF+Q+QP LPI+S NVHRL+ITSVLVSAKFMDD  YNNA+YAKVGGI+
Sbjct: 79  DSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGIT 138

Query: 129 TAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLL 168
           T E+N LE+DFLFG+GF LNVT +T++ Y S LQR+M++
Sbjct: 139 TEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

[Close]

BLAST of Csor.00g255120 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50
Identity = 111/203 (54.68%), Postives = 142/203 (69.95%), Query Frame = 0


Query: 10  MPKLINFLSCLLQRVAESND---QNLSVHLQHHKISAFHGLTRPAISIQSYLDRIFKYAN 69
           +P+++  LS LLQRVAE ND      +V  +   +SAF GLT+PAISI  YL+RIF++AN
Sbjct: 10  VPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERIFRFAN 69

Query: 70  CSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAYYAKVGG 129
           CSP C+VVAYIYLDRF++R+P+L ++SFNVHRLLITSVL + KF+DD  YNNAY+A+VGG
Sbjct: 70  CSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYFARVGG 129

Query: 130 ISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLL-QPPLSSASAKSELILTA 189
           IS  E+N+LEVDFLFG+ F LNVTP  F SY + LQ +M  L QPP              
Sbjct: 130 ISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPPAVDLP--------- 189

Query: 190 RALKPHFC-FDEDEAS--HKKQQ 206
              + H C  D+D+A   HK+QQ
Sbjct: 190 ---RLHCCPSDQDDAGCHHKQQQ 200

[Close]

BLAST of Csor.00g255120 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 77/161 (47.83%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 8   TVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDRIFKYANC 67
           T  PK++  L+  L R  + N+  L  +      + FHG   P +SI+ Y +RIFKY+ C
Sbjct: 33  TEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLYAERIFKYSEC 92

Query: 68  SPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAYYAKVGGI 127
           SP CFV+A IY++R++Q QP + + S +VHRLLITSV+V+AKF DD ++NNA+YA+VGGI
Sbjct: 93  SPSCFVLALIYMERYLQ-QPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFYARVGGI 152

Query: 128 STAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLL 169
           ST E+N LE+D LF L F L V   TF SY   L+++ ++L
Sbjct: 153 STVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMVL 192

[Close]

BLAST of Csor.00g255120 vs. NCBI nr
Match: KAG6597224.1 (Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028696.1 Cyclin-U4-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418 bits (1075), Expect = 1.76e-147
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR
Sbjct: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180
           YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE
Sbjct: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180

Query: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209
           LILTARALKPHFCFDEDEASHKKQQLAAV
Sbjct: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209

[Close]

BLAST of Csor.00g255120 vs. NCBI nr
Match: XP_022974161.1 (cyclin-U4-1-like [Cucurbita maxima])

HSP 1 Score: 417 bits (1071), Expect = 7.15e-147
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR
Sbjct: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180
           YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSS SAKSE
Sbjct: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSTSAKSE 180

Query: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209
           LILTARALKPHFCFDEDEASHKKQQLAAV
Sbjct: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209

[Close]

BLAST of Csor.00g255120 vs. NCBI nr
Match: XP_022963826.1 (cyclin-U4-1-like [Cucurbita moschata])

HSP 1 Score: 415 bits (1067), Expect = 2.91e-146
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR
Sbjct: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180
           YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE
Sbjct: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180

Query: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209
           LILTARALKPH CFDEDEASHKKQQLAAV
Sbjct: 181 LILTARALKPHSCFDEDEASHKKQQLAAV 209

[Close]

BLAST of Csor.00g255120 vs. NCBI nr
Match: XP_023539091.1 (cyclin-U4-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413 bits (1061), Expect = 2.39e-145
Identity = 206/209 (98.56%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR
Sbjct: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180
           YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPP+SSASAKSE
Sbjct: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPVSSASAKSE 180

Query: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209
           L LTARALKPHFCFDEDEASHKKQ LAAV
Sbjct: 181 LTLTARALKPHFCFDEDEASHKKQPLAAV 209

[Close]

BLAST of Csor.00g255120 vs. NCBI nr
Match: XP_008438223.1 (PREDICTED: cyclin-U4-1 [Cucumis melo] >KAA0049071.1 cyclin-U4-1 [Cucumis melo var. makuwa] >TYK17491.1 cyclin-U4-1 [Cucumis melo var. makuwa])

HSP 1 Score: 381 bits (979), Expect = 8.16e-133
Identity = 192/211 (91.00%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVM KLI+FLSCLLQRVAESND+NLSVHLQ HKIS+FHGLTRP+ISIQSYLDR
Sbjct: 1   MAELEDPTVMAKLIDFLSCLLQRVAESNDRNLSVHLQPHKISSFHGLTRPSISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFV+AY+YLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVIAYVYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPL-SSASAKS 180
           YAKVGGIST E+NFLEVDFLFGLGFHLNVTP TFHSYYSYLQRQMLLLQPPL S+AS KS
Sbjct: 121 YAKVGGISTTEMNFLEVDFLFGLGFHLNVTPTTFHSYYSYLQRQMLLLQPPLMSTASTKS 180

Query: 181 ELILTA-RALKPHFCFDEDEASHKKQQLAAV 209
           EL+L++ RALK HFCFDEDEASHKKQQLAAV
Sbjct: 181 ELLLSSSRALKSHFCFDEDEASHKKQQLAAV 211

[Close]

BLAST of Csor.00g255120 vs. ExPASy TrEMBL
Match: A0A6J1IAK7 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111472749 PE=3 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 3.46e-147
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR
Sbjct: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180
           YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSS SAKSE
Sbjct: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSTSAKSE 180

Query: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209
           LILTARALKPHFCFDEDEASHKKQQLAAV
Sbjct: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209

[Close]

BLAST of Csor.00g255120 vs. ExPASy TrEMBL
Match: A0A6J1HH53 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111463982 PE=3 SV=1)

HSP 1 Score: 415 bits (1067), Expect = 1.41e-146
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR
Sbjct: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180
           YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE
Sbjct: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180

Query: 181 LILTARALKPHFCFDEDEASHKKQQLAAV 209
           LILTARALKPH CFDEDEASHKKQQLAAV
Sbjct: 181 LILTARALKPHSCFDEDEASHKKQQLAAV 209

[Close]

BLAST of Csor.00g255120 vs. ExPASy TrEMBL
Match: A0A5A7U636 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003560 PE=3 SV=1)

HSP 1 Score: 381 bits (979), Expect = 3.95e-133
Identity = 192/211 (91.00%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVM KLI+FLSCLLQRVAESND+NLSVHLQ HKIS+FHGLTRP+ISIQSYLDR
Sbjct: 1   MAELEDPTVMAKLIDFLSCLLQRVAESNDRNLSVHLQPHKISSFHGLTRPSISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFV+AY+YLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVIAYVYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPL-SSASAKS 180
           YAKVGGIST E+NFLEVDFLFGLGFHLNVTP TFHSYYSYLQRQMLLLQPPL S+AS KS
Sbjct: 121 YAKVGGISTTEMNFLEVDFLFGLGFHLNVTPTTFHSYYSYLQRQMLLLQPPLMSTASTKS 180

Query: 181 ELILTA-RALKPHFCFDEDEASHKKQQLAAV 209
           EL+L++ RALK HFCFDEDEASHKKQQLAAV
Sbjct: 181 ELLLSSSRALKSHFCFDEDEASHKKQQLAAV 211

[Close]

BLAST of Csor.00g255120 vs. ExPASy TrEMBL
Match: A0A1S3AWI3 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103483393 PE=3 SV=1)

HSP 1 Score: 381 bits (979), Expect = 3.95e-133
Identity = 192/211 (91.00%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELEDPTVM KLI+FLSCLLQRVAESND+NLSVHLQ HKIS+FHGLTRP+ISIQSYLDR
Sbjct: 1   MAELEDPTVMAKLIDFLSCLLQRVAESNDRNLSVHLQPHKISSFHGLTRPSISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFV+AY+YLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVIAYVYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPL-SSASAKS 180
           YAKVGGIST E+NFLEVDFLFGLGFHLNVTP TFHSYYSYLQRQMLLLQPPL S+AS KS
Sbjct: 121 YAKVGGISTTEMNFLEVDFLFGLGFHLNVTPTTFHSYYSYLQRQMLLLQPPLMSTASTKS 180

Query: 181 ELILTA-RALKPHFCFDEDEASHKKQQLAAV 209
           EL+L++ RALK HFCFDEDEASHKKQQLAAV
Sbjct: 181 ELLLSSSRALKSHFCFDEDEASHKKQQLAAV 211

[Close]

BLAST of Csor.00g255120 vs. ExPASy TrEMBL
Match: A0A0A0L3W4 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_3G127030 PE=3 SV=1)

HSP 1 Score: 378 bits (971), Expect = 6.55e-132
Identity = 192/211 (91.00%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELED TVM KLI+FLSCLLQRVAESND+NLSV+LQ HKISAFHGLTRP+ISIQSYLDR
Sbjct: 1   MAELEDSTVMAKLIDFLSCLLQRVAESNDRNLSVNLQPHKISAFHGLTRPSISIQSYLDR 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSPCCFV+AY+YLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY
Sbjct: 61  IFKYANCSPCCFVIAYVYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPL-SSASAKS 180
           YAKVGGIST E+NFLEVDFLFGLGFHLNVTP TFHSYYSYLQRQMLLLQPPL SSAS KS
Sbjct: 121 YAKVGGISTTEMNFLEVDFLFGLGFHLNVTPTTFHSYYSYLQRQMLLLQPPLTSSASTKS 180

Query: 181 ELILTA-RALKPHFCFDEDEASHKKQQLAAV 209
           +L+LT+ RALK HFCFDEDEASHKKQQLAAV
Sbjct: 181 DLLLTSSRALKSHFCFDEDEASHKKQQLAAV 211

[Close]

BLAST of Csor.00g255120 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 283.5 bits (724), Expect = 1.4e-76
Identity = 142/205 (69.27%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MAELEDPTVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 60
           MAELE+P+VM KLI FLS LL+RVAESND    V  Q  ++S FHGL+RP I+IQSYL+R
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 120
           IFKYANCSP CFVVAY+YLDRF  RQPSLPINSFNVHRLLITSV+V+AKF+DD YYNNAY
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAY 120

Query: 121 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLLLQPPLSSASAKSE 180
           YAKVGGIST E+NFLE+DFLFGLGF LNVTPNTF++Y+SYLQ++M LLQP        S 
Sbjct: 121 YAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPSSR 180

Query: 181 LILTARALKPHFCFDEDEASHKKQQ 206
            ++T         F++DEASH+KQQ
Sbjct: 181 SLIT---------FNDDEASHQKQQ 196

[Close]

BLAST of Csor.00g255120 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58
Identity = 125/218 (57.34%), Postives = 162/218 (74.31%), Query Frame = 0


Query: 3   ELEDP--TVMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDR 62
           +L++P   +MP ++  +S LLQRV+E+ND NLS   Q  K S+F G+T+P+ISI+SYL+R
Sbjct: 13  DLQEPLAEIMPSVLTAMSYLLQRVSETND-NLS---QKQKPSSFTGVTKPSISIRSYLER 72

Query: 63  IFKYANCSPCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAY 122
           IF+YANCS  C++VAYIYLDRFV++QP LPINSFNVHRL+ITSVLVSAKFMDD  YNN Y
Sbjct: 73  IFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEY 132

Query: 123 YAKVGGISTAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQM--------LLLQPPL 182
           YAKVGGIS  E+N LE+DFLFG+GF LNVT +TF++Y  +LQR+M        L L+P  
Sbjct: 133 YAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMKSLFLEPSS 192

Query: 183 SSASAKSELILTARALKPHFCFDEDEAS--HKKQQLAA 209
              S+K++L+     + PH   +ED  S  H K+QLAA
Sbjct: 193 FKISSKTKLV-----MYPH---EEDSLSTHHNKKQLAA 218

[Close]

BLAST of Csor.00g255120 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-55
Identity = 101/159 (63.52%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 9   VMPKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDRIFKYANCS 68
           +MP +I  +S LLQRV+E+ND       +H +ISAF+ +T+P+ISI+SY++RIFKYA+CS
Sbjct: 19  IMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCS 78

Query: 69  PCCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAYYAKVGGIS 128
             C++VAYIYLDRF+Q+QP LPI+S NVHRL+ITSVLVSAKFMDD  YNNA+YAKVGGI+
Sbjct: 79  DSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGIT 138

Query: 129 TAEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLL 168
           T E+N LE+DFLFG+GF LNVT +T++ Y S LQR+M++
Sbjct: 139 TEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

[Close]

BLAST of Csor.00g255120 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 145.6 bits (366), Expect = 4.5e-35
Identity = 73/184 (39.67%), Postives = 113/184 (61.41%), Query Frame = 0


Query: 11  PKLINFLSCLLQRVAESNDQNLSVHLQHHK-ISAFHGLTRPAISIQSYLDRIFKYANCSP 70
           P+++  +S +++++   N+          K + AFHG+  P+ISI  YL+RI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 71  CCFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAYYAKVGGIST 130
            CFVV Y+Y+DR   + P   + S NVHRLL+T V+++AK +DD +YNN +YA+VGG+S 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 131 AEINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQMLL------------LQPPLSSASA 182
           A++N +E++ LF L F + V+   F SY  +L+++M L            +Q  LS AS 
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLNDAVSSLKDIQPMQESLSPAST 204

[Close]

BLAST of Csor.00g255120 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34
Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 11  PKLINFLSCLLQRVAESNDQNLSVHLQHHKISAFHGLTRPAISIQSYLDRIFKYANCSPC 70
           P +++ LS  L+R    N  +  +      ++ F G + P ISI  YLDRIFKY+ CSP 
Sbjct: 32  PTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPS 91

Query: 71  CFVVAYIYLDRFVQRQPSLPINSFNVHRLLITSVLVSAKFMDDTYYNNAYYAKVGGISTA 130
           CFV+A+IY+D F+ +  +L +   NVHRL+IT+V+++AK  DD Y+NNAYYA+VGG++T 
Sbjct: 92  CFVIAHIYIDHFLHKTRAL-LKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVGGVTTR 151

Query: 131 EINFLEVDFLFGLGFHLNVTPNTFHSYYSYLQRQ 165
           E+N LE++ LF L F L V P TFH++   L++Q
Sbjct: 152 ELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

The following BLAST results are available for this feature:

BLAST of Csor.00g255120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80513	1.9e-75	69.27	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q9FKF6	1.4e-57	57.34	Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1	[more]
Q9LY16	2.5e-54	63.52	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]
Q7XC35	1.7e-50	54.68	Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1	[more]
Q75HV0	1.2e-35	47.83	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]

BLAST of Csor.00g255120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597224.1	1.76e-147	100.00	Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028696.1 Cycli...	[more]
XP_022974161.1	7.15e-147	99.52	cyclin-U4-1-like [Cucurbita maxima]	[more]
XP_022963826.1	2.91e-146	99.52	cyclin-U4-1-like [Cucurbita moschata]	[more]
XP_023539091.1	2.39e-145	98.56	cyclin-U4-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_008438223.1	8.16e-133	91.00	PREDICTED: cyclin-U4-1 [Cucumis melo] >KAA0049071.1 cyclin-U4-1 [Cucumis melo va...	[more]

BLAST of Csor.00g255120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAK7	3.46e-147	99.52	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111472749 PE=3 SV=1	[more]
A0A6J1HH53	1.41e-146	99.52	Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111463982 PE=3 SV=1	[more]
A0A5A7U636	3.95e-133	91.00	Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003560 PE=3 S...	[more]
A0A1S3AWI3	3.95e-133	91.00	Cyclin OS=Cucumis melo OX=3656 GN=LOC103483393 PE=3 SV=1	[more]
A0A0A0L3W4	6.55e-132	91.00	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_3G127030 PE=3 SV=1	[more]

BLAST of Csor.00g255120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44740.1	1.4e-76	69.27	cyclin p4;1	[more]
AT5G61650.1	1.0e-58	57.34	CYCLIN P4;2	[more]
AT5G07450.1	1.8e-55	63.52	cyclin p4;3	[more]
AT3G21870.1	4.5e-35	39.67	cyclin p2;1	[more]
AT3G63120.1	1.7e-34	46.10	cyclin p1;1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.472.10		coord: 7..203 e-value: 5.2E-57 score: 194.9
None	No IPR available	PANTHER	PTHR15615:SF102	CYCLIN	coord: 1..206
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 1..206
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 2..206 e-value: 6.2E-76 score: 252.8
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 27..147 e-value: 1.4E-39 score: 136.1
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 57..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g255120.m01	Csor.00g255120.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0019901	protein kinase binding