Csor.00g253930 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCTTCAATTTCTGCATCTCGGCTTCACAAACCTCTTCCCTCCTCCTTCCATGGAGGCTGGGGGTCCTCCATTTGCGGCGAAACCACCGGGATGCTCGCGAAATCGGTCCCGGAAGTGGTCCGAGTTGCAAAGCCGGTGAGATTCCGGCCAATGATGAAGAATGTTAACGAAGGGAAAGGTGTATTTGCGCCTGCCGTTGTTCTTGCTCGAAATATTATCGGAAAGAAGCGTTTCAATCAGTTGAGAGGCAAGGCCATTGCGCTGCACTCACAGGTAAATTAGTCACTTGAACGAACTGTCCTTATGAGTTTAGTGAGAAATGCGTGTTGAGATTTGGGTTTTGGACAGATTATTACGGAGTTCTGCAAATCTATTGGAGCTGATGCTAAGCAAAGGCAGGGTTTGATTAGGTTAGCCAAGAAGAATGGCGAAAGGTTAGGGTTCCTTGCTTGATTTTATCACTCTGTTTCTGTTATCATAGATCTGTTTGAGCTTCCATTTGTATATCTATCAAACACAATCTGAAGCATTATGTTTGCATATTCTTGTATATAAAACTCTTATTCATCGCTTTTAAGAAGAATCAAAGGATGATGAATGAAGGCCTAGAATGTTGATCAATATGATGACTTTATCAGGGTTTTTTCTTTTAGAACTATTGCCATATTCATTAGCTTAGAAACCTGTATGGAGTTTATAGACCATGGCAACGATGAACAGTTTAAAATCGTGACGAACTTTTGCTTCTAATAGTGACGACTGTTGTACCCACAAATCAACACATGTGATTCTCACTCATATGCTTCGTAGGAAAATTTTTAAGATGTCACCTAACCAAGTATTGCTCAAATTTGGAGCTCTTATAATTGGAAAAAGAACGTGCACCTTATTGGCTTATTGGTTTAGGTAGACACTTCAATTCTTTTCAAGTTTTTCTTAAGGATCCTATGCTACGGACCACTTGGATGAGGTCTCTGTCTATTCGTGTTACTCCTCCTTTACTCCTCCTTTACTTAGGCATTACAATACCAATAATGTGCATTTTTCTTCTAAAGTTAAAAAAATGTTTGCTTTTGAGTAAATTCTATATTGGGCGGGCTCTCTTAGAAAACCACGAACCTCCAGTGGTATGATATTGTCCACTCTTATGGAGCCATTGAACAACAATAAGCTCTCAAACAAAGTATACCATATAACCTCTCTTGAGGTCTATGGAGCCCTTGAACAACCTCCCTTTAATCAACCCTTTATTCGAGACTTGGGTCACTTTTTACTATGCCATCGAGACTCACAATGTCTTTGTTCGACATTTGAGGAATTTGAGGATTCTATTGACATAGTTTTACTCTTAGTTTCTCCAAAAAGCCTTGTACTAATGAAAAATGTATTCCTTATAAATCTATGATCAACCACTTAATTAGCCATGTGATATTCCTCTCTCTATCTTCAATAGGCTAATATAAAAGAAAATTATATGAGCAAGAACAAAACATGCTAAAAGAACATCTACTAGAAACCGTTATGCTAAAAGAATCAAAGGATGATGAATGAAGGCCTAGAATGTTGATCAATATGACCACTCTATCAGGGTTTTTTTTTTTAGATCTATTGCCATATTCAACTTAAAATTCTCACGAGTTGTGCTGATCTAATATGTATCAGAGTCATGTCCTAAAGACTCTAAACTTAGTCATGTCAATAGAATCCTCAAATGGCAGACAAAGGACTCCAATCCCTCAAATGTCGAACAAAGGACTCCAATCCTCAAATGTCGAACAAGGACTCCAAAAAGATAAGGAGTCGGGGCTCCTTTAAGGCATAGTAAAAAATGACTAAGACTCAAAAAGAAAAATGAGTCGAGCTTCAATTAAGGGGAGGTGTACTTTGTTCGGATGAAAAGTCCGCTAATTTAGGGAGTGATCATGAGTTTATAATCAAAGAGTACTCTCTATTGGTGTGAGGCCTTTTGGGGAAGTCCAACGCAAAGCCATTGGTATGTGAATGAATCTCTTGAGGAGATGAAACTACGGTTAAAAAAGACTTAAAAGAGTAGATAGTTACTAGCTATACCTATATGTTTCTATGCCCTAGATTTACACCTTTATTCGACACAAGCTACTTTTGATTACACCTTAGCTTCTGACATTTGAGAATTCTATTGACATGACTTTACTTTTAGTTTCAGCAAAAGGCTTGCTACCAATGAATATGTAAAACTCATGATCAACTCCTTAATTAGGCAAAATTTTGGTATCTTTAAACTTTAAAAAGCAAACAATACCGAAATAAACTACACCTTATTCATCAATAATCAAGGCATTACATCTCTCTATGATCATCTCTCTCTGTCTCTCCAGATCAAAATACAATCCTCTAGCCGACGATCGTTCATGGAGAGTCAAGAAGAACAAAAGAAAATAG ATGGCAGCTTCAATTTCTGCATCTCGGCTTCACAAACCTCTTCCCTCCTCCTTCCATGGAGGCTGGGGGTCCTCCATTTGCGGCGAAACCACCGGGATGCTCGCGAAATCGGTCCCGGAAGTGGTCCGAGTTGCAAAGCCGGTGAGATTCCGGCCAATGATGAAGAATGTTAACGAAGGGAAAGGTGTATTTGCGCCTGCCGTTGTTCTTGCTCGAAATATTATCGGAAAGAAGCGTTTCAATCAGTTGAGAGGCAAGGCCATTGCGCTGCACTCACAGATTATTACGGAGTTCTGCAAATCTATTGGAGCTGATGCTAAGCAAAGGCAGGGTTTGATTAGGTTAGCCAAGAAGAATGGCGAAAGATCAAAATACAATCCTCTAGCCGACGATCGTTCATGGAGAGTCAAGAAGAACAAAAGAAAATAG ATGGCAGCTTCAATTTCTGCATCTCGGCTTCACAAACCTCTTCCCTCCTCCTTCCATGGAGGCTGGGGGTCCTCCATTTGCGGCGAAACCACCGGGATGCTCGCGAAATCGGTCCCGGAAGTGGTCCGAGTTGCAAAGCCGGTGAGATTCCGGCCAATGATGAAGAATGTTAACGAAGGGAAAGGTGTATTTGCGCCTGCCGTTGTTCTTGCTCGAAATATTATCGGAAAGAAGCGTTTCAATCAGTTGAGAGGCAAGGCCATTGCGCTGCACTCACAGATTATTACGGAGTTCTGCAAATCTATTGGAGCTGATGCTAAGCAAAGGCAGGGTTTGATTAGGTTAGCCAAGAAGAATGGCGAAAGATCAAAATACAATCCTCTAGCCGACGATCGTTCATGGAGAGTCAAGAAGAACAAAAGAAAATAG MAASISASRLHKPLPSSFHGGWGSSICGETTGMLAKSVPEVVRVAKPVRFRPMMKNVNEGKGVFAPAVVLARNIIGKKRFNQLRGKAIALHSQIITEFCKSIGADAKQRQGLIRLAKKNGERSKYNPLADDRSWRVKKNKRK Homology
BLAST of Csor.00g253930 vs. ExPASy Swiss-Prot
Match: Q9SL05 (Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR5 PE=1 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.0e-39 Identity = 91/126 (72.22%), Postives = 105/126 (83.33%), Query Frame = 0
BLAST of Csor.00g253930 vs. NCBI nr
Match: KAG6597343.1 (Protein PROTON GRADIENT REGULATION 5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 280 bits (717), Expect = 4.25e-95 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Csor.00g253930 vs. NCBI nr
Match: KAG7028808.1 (Protein PROTON GRADIENT REGULATION 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241 bits (614), Expect = 1.31e-79 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Csor.00g253930 vs. NCBI nr
Match: XP_023539035.1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 239 bits (609), Expect = 7.58e-79 Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Csor.00g253930 vs. NCBI nr
Match: XP_022974550.1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022974551.1 protein PROTON GRADIENT REGULATION 5, chloroplastic-like isoform X2 [Cucurbita maxima] >XP_022975467.1 protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 238 bits (606), Expect = 2.17e-78 Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Csor.00g253930 vs. NCBI nr
Match: XP_022942098.1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 236 bits (601), Expect = 1.26e-77 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Csor.00g253930 vs. ExPASy TrEMBL
Match: A0A6J1IE84 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473217 PE=4 SV=1) HSP 1 Score: 238 bits (606), Expect = 1.05e-78 Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Csor.00g253930 vs. ExPASy TrEMBL
Match: A0A6J1FTX5 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447270 PE=4 SV=1) HSP 1 Score: 236 bits (601), Expect = 6.09e-78 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Csor.00g253930 vs. ExPASy TrEMBL
Match: A0A5A7U4M1 (Protein PROTON GRADIENT REGULATION 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001970 PE=4 SV=1) HSP 1 Score: 214 bits (545), Expect = 2.10e-69 Identity = 105/122 (86.07%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Csor.00g253930 vs. ExPASy TrEMBL
Match: A0A1S3AW42 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483556 PE=4 SV=1) HSP 1 Score: 214 bits (545), Expect = 2.10e-69 Identity = 105/122 (86.07%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Csor.00g253930 vs. ExPASy TrEMBL
Match: A0A0A0L870 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134710 PE=4 SV=1) HSP 1 Score: 214 bits (544), Expect = 2.98e-69 Identity = 106/122 (86.89%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Csor.00g253930 vs. TAIR 10
Match: AT2G05620.1 (proton gradient regulation 5 ) HSP 1 Score: 163.3 bits (412), Expect = 1.4e-40 Identity = 91/126 (72.22%), Postives = 105/126 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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