Csor.00g253300 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g253300
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ADP-ribosylation factor, putative
Location	Csor_Chr06: 9777697 .. 9779260 (+)
RNA-Seq Expression	Csor.00g253300
Synteny	Csor.00g253300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATTTACGGCAAAAGAATACAAAATCGTGGTCGTTGGGTTGGATAATGCCGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACACATCCTACGGTTGGAAGCAATGTTGAAGAGCTCGTGTACAAGAATATCCGATTCGAGGTACAGTCGATCTATCAATTTGCTCCTATTTTTCCGTCTATTTGTTTCGCGTTGATGATCGCTAGTTGAGGATTGTTGGGAGTGAATTCCAAATTGACTAATTTAAGGAATGATCATGAATTTATAAGTAAGGAATATATGTTCATCGGTACGAGGGTATGAGGCCTTTTGTGAAGCTCCCATGATTGCTTATGTTTAAAGTGGACAATATTATACCAAATCATGTTCTTAACTTAGCCGTGTGAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAGCCTCGAAAGTGTAGTCAAAAGTGATTCAAGTGTCGAATAAAGGGTGTACTTTGTTCGAGAACTCTAGAGAAGGAGTCGAGGTTCGATGAAGAGGAAGCTCTTCGAAGACTCTATGTTGTACTTTGTTCGAGAGGAGGATTGTTGAGGATTGTTGGGAGTGAGTCCCACATTGGCTAATTTTGGGGGAAGGATCATAGGTTCATAAGTAAGGAATACATCTCCATTGGTATGAGGTCTTTTGGAAAAGCCGAAAGCAAAGCCATGAGAGCTTATGCTCAGAGTGGACAATATCATACCATTGTGGAGATTTGTGATTCCTTACCTGACTTCTACTCTGTTGTTCATTATCTTCAATCGACAGGGGTTCTTTTCCTCGATCGATTCCGTTCTAGTTTTCTATTCGTCCAGTGTTGGCTTGTGTGGTTTTGCACTGGGATCTTTGAGATCTTTTAATGTTCCGGCCTGTTGTTGTAGAGTTGTCACTTGATTTTGTGAGTCAGTGTCTTTATAGCATTTAACTGGTAACTTCTCAAAATATTACAAAATGTTGGGCTGATTTGCCTTGTGATTTGAGTATGGTTTCCTCTATATTTGGCTTGTTTATTCGCCTAACAAGGAAATTGAAAGCAGAGTAATTGTTGGAAAAGCATATACAATCCAGTTATATTGAAAACTTTGCACAAAACCCATCTCTGTTCTTCATGTTGTAAGGCGAAGCTGAACAGCTAAAACCTGTGTTGTTTTGGCTTTGTTTTCTGTAGGTATGGGATCTCGGTGGTCAAGAGAGGCTTAGGACATCATGGGCAACATATTACCGTGGAACTCATGCTGTGATTGCGGTGATAGACAGCACAGATAGAGCAAGAATCAGCATTATGAAGGACGAGCTCTTCAGACTACTCGGTCACGATGATCTTCAGCAATCTGTGGTGCTGGTTTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCGGTCGAAATCACCGATGCTCTTTCGCTTCACAGCATCAAGAATCACGACTGGCACATCCAAGCCTGCTCTGCCCTCACCGGAGATGGTCTATACGACGGTCTTGGGTGGATTGCTCAGCAAGTTACCGGTAAAACGCCGAGTTGA

mRNA sequence

ATGTTATTTACGGCAAAAGAATACAAAATCGTGGTCGTTGGGTTGGATAATGCCGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACACATCCTACGGTTGGAAGCAATGTTGAAGAGCTCGTGTACAAGAATATCCGATTCGAGGTATGGGATCTCGGTGGTCAAGAGAGGCTTAGGACATCATGGGCAACATATTACCGTGGAACTCATGCTGTGATTGCGGTGATAGACAGCACAGATAGAGCAAGAATCAGCATTATGAAGGACGAGCTCTTCAGACTACTCGGTCACGATGATCTTCAGCAATCTGTGGTGCTGGTTTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCGGTCGAAATCACCGATGCTCTTTCGCTTCACAGCATCAAGAATCACGACTGGCACATCCAAGCCTGCTCTGCCCTCACCGGAGATGGTCTATACGACGGTCTTGGGTGGATTGCTCAGCAAGTTACCGGTAAAACGCCGAGTTGA

Coding sequence (CDS)

ATGTTATTTACGGCAAAAGAATACAAAATCGTGGTCGTTGGGTTGGATAATGCCGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACACATCCTACGGTTGGAAGCAATGTTGAAGAGCTCGTGTACAAGAATATCCGATTCGAGGTATGGGATCTCGGTGGTCAAGAGAGGCTTAGGACATCATGGGCAACATATTACCGTGGAACTCATGCTGTGATTGCGGTGATAGACAGCACAGATAGAGCAAGAATCAGCATTATGAAGGACGAGCTCTTCAGACTACTCGGTCACGATGATCTTCAGCAATCTGTGGTGCTGGTTTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCGGTCGAAATCACCGATGCTCTTTCGCTTCACAGCATCAAGAATCACGACTGGCACATCCAAGCCTGCTCTGCCCTCACCGGAGATGGTCTATACGACGGTCTTGGGTGGATTGCTCAGCAAGTTACCGGTAAAACGCCGAGTTGA

Protein sequence

MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS

Homology

[Close]

BLAST of Csor.00g253300 vs. ExPASy Swiss-Prot
Match: Q55AD9 (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum OX=44689 GN=arl5 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-59
Identity = 103/165 (62.42%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 3   FTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQE 62
           F   EYK+++VGL+ AGKTTTLYKL L EVV+T PTVGSN+EE VY+NIR  +WDLGGQ+
Sbjct: 16  FNNAEYKVIIVGLNAAGKTTTLYKLLLDEVVSTTPTVGSNLEEFVYRNIRLLMWDLGGQD 75

Query: 63  RLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLKD 122
            LR++W  YY  T AVI VIDSTDRAR++++K+ELF++L H++L++S++L++ANKQDLKD
Sbjct: 76  LLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKD 135

Query: 123 AMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQV 168
           AM+P E++  LSLHSIK+HD+HIQAC ALTG GL  GL W+   +
Sbjct: 136 AMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHI 180

[Close]

BLAST of Csor.00g253300 vs. ExPASy Swiss-Prot
Match: Q9Y689 (ADP-ribosylation factor-like protein 5A OS=Homo sapiens OX=9606 GN=ARL5A PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 96/166 (57.83%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 2   LFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQ 61
           LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N RF +WD+GGQ
Sbjct: 11  LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQ 70

Query: 62  ERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLK 121
           E LR+SW TYY  T  VI V+DSTDR RIS+ ++EL+++L H+DL+++ +L+FANKQD+K
Sbjct: 71  ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK 130

Query: 122 DAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQV 168
           + MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+  ++
Sbjct: 131 ECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176

[Close]

BLAST of Csor.00g253300 vs. ExPASy Swiss-Prot
Match: P51646 (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus OX=10116 GN=Arl5a PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 96/166 (57.83%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 2   LFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQ 61
           LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N RF +WD+GGQ
Sbjct: 11  LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQ 70

Query: 62  ERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLK 121
           E LR+SW TYY  T  VI V+DSTDR RIS+ ++EL+++L H+DL+++ +L+FANKQD+K
Sbjct: 71  ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK 130

Query: 122 DAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQV 168
           + MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+  ++
Sbjct: 131 ECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176

[Close]

BLAST of Csor.00g253300 vs. ExPASy Swiss-Prot
Match: Q80ZU0 (ADP-ribosylation factor-like protein 5A OS=Mus musculus OX=10090 GN=Arl5a PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-54
Identity = 96/166 (57.83%), Postives = 128/166 (77.11%), Query Frame = 0


Query: 2   LFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQ 61
           LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N RF +WD+GGQ
Sbjct: 11  LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQ 70

Query: 62  ERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLK 121
           E LR SW TYY  T  VI V+DSTDR RIS+ ++EL+++L H+DL+++ +L+FANKQD+K
Sbjct: 71  ESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK 130

Query: 122 DAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQV 168
           + MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+  ++
Sbjct: 131 ECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176

[Close]

BLAST of Csor.00g253300 vs. ExPASy Swiss-Prot
Match: Q2KJ96 (ADP-ribosylation factor-like protein 5A OS=Bos taurus OX=9913 GN=ARL5A PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-54
Identity = 96/166 (57.83%), Postives = 128/166 (77.11%), Query Frame = 0


Query: 2   LFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQ 61
           LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N RF +WD+GGQ
Sbjct: 11  LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQ 70

Query: 62  ERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLK 121
           E LR+SW TYY  T  VI V+DSTDR RIS+ ++EL+++L H+DL+++ +L+FANKQD+K
Sbjct: 71  ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK 130

Query: 122 DAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQV 168
             MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+  ++
Sbjct: 131 GCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176

[Close]

BLAST of Csor.00g253300 vs. NCBI nr
Match: KAG6597406.1 (ADP-ribosylation factor-like protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 353 bits (905), Expect = 9.40e-123
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL
Sbjct: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS
Sbjct: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173

[Close]

BLAST of Csor.00g253300 vs. NCBI nr
Match: XP_022937092.1 (ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_022937100.1 ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_022937107.1 ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_022937116.1 ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_023538887.1 ADP-ribosylation factor-like protein 5 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350 bits (899), Expect = 1.10e-121
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 11  MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 70

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL
Sbjct: 71  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 130

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS
Sbjct: 131 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 183

[Close]

BLAST of Csor.00g253300 vs. NCBI nr
Match: XP_023538886.1 (ADP-ribosylation factor-like protein 5 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350 bits (899), Expect = 2.18e-120
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 96  MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 155

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL
Sbjct: 156 QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 215

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS
Sbjct: 216 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 268

[Close]

BLAST of Csor.00g253300 vs. NCBI nr
Match: XP_008438599.1 (PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis melo])

HSP 1 Score: 345 bits (884), Expect = 2.13e-119
Identity = 168/173 (97.11%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 11  MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 70

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVIDSTDRARI+IMKDELFRLLGH+DLQQ+VVLVFANKQDL
Sbjct: 71  QERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAVVLVFANKQDL 130

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK PS
Sbjct: 131 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKAPS 183

[Close]

BLAST of Csor.00g253300 vs. NCBI nr
Match: XP_022975631.1 (ADP-ribosylation factor-like protein 5 isoform X1 [Cucurbita maxima])

HSP 1 Score: 344 bits (882), Expect = 3.03e-119
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 1   MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVI+STDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL
Sbjct: 61  QERLRTSWATYYRGTHAVIAVINSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVT K PS
Sbjct: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTSKMPS 173

[Close]

BLAST of Csor.00g253300 vs. ExPASy TrEMBL
Match: A0A6J1FA74 (ADP-ribosylation factor-like protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111443495 PE=3 SV=1)

HSP 1 Score: 350 bits (899), Expect = 5.32e-122
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 11  MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 70

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL
Sbjct: 71  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 130

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS
Sbjct: 131 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 183

[Close]

BLAST of Csor.00g253300 vs. ExPASy TrEMBL
Match: A0A1S3AWS5 (ADP-ribosylation factor-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103483660 PE=3 SV=1)

HSP 1 Score: 345 bits (884), Expect = 1.03e-119
Identity = 168/173 (97.11%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 11  MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 70

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVIDSTDRARI+IMKDELFRLLGH+DLQQ+VVLVFANKQDL
Sbjct: 71  QERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAVVLVFANKQDL 130

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK PS
Sbjct: 131 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKAPS 183

[Close]

BLAST of Csor.00g253300 vs. ExPASy TrEMBL
Match: A0A6J1IER4 (ADP-ribosylation factor-like protein 5 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111475364 PE=3 SV=1)

HSP 1 Score: 344 bits (882), Expect = 1.47e-119
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 1   MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVI+STDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL
Sbjct: 61  QERLRTSWATYYRGTHAVIAVINSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVT K PS
Sbjct: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTSKMPS 173

[Close]

BLAST of Csor.00g253300 vs. ExPASy TrEMBL
Match: A0A6J1IE39 (ADP-ribosylation factor-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111474731 PE=3 SV=1)

HSP 1 Score: 344 bits (882), Expect = 2.08e-119
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 11  MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 70

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVI+STDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL
Sbjct: 71  QERLRTSWATYYRGTHAVIAVINSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 130

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVT K PS
Sbjct: 131 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTSKMPS 183

[Close]

BLAST of Csor.00g253300 vs. ExPASy TrEMBL
Match: A0A5A7U254 (ADP-ribosylation factor-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00910 PE=3 SV=1)

HSP 1 Score: 345 bits (884), Expect = 9.11e-119
Identity = 168/173 (97.11%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           MLF AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 73  MLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 132

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           QERLRTSWATYYRGTHAVIAVIDSTDRARI+IMKDELFRLLGH+DLQQ+VVLVFANKQDL
Sbjct: 133 QERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAVVLVFANKQDL 192

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 173
           KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK PS
Sbjct: 193 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKAPS 245

[Close]

BLAST of Csor.00g253300 vs. TAIR 10
Match: AT3G22950.1 (ADP-ribosylation factor C1 )

HSP 1 Score: 322.4 bits (825), Expect = 2.2e-88
Identity = 155/173 (89.60%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           M+F AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 11  MMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 70

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           Q+RLRTSWATYYRGTHAVI VIDSTDRARIS MKDEL RLLGH+DLQ SV+LVFANKQDL
Sbjct: 71  QDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSVILVFANKQDL 130

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 174
           KDAMTP EITDAL+LHSIKNHDWHIQA  A+TG+GLYDGLGWIAQ+VTGK  S
Sbjct: 131 KDAMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKVTGKATS 183

[Close]

BLAST of Csor.00g253300 vs. TAIR 10
Match: AT3G22950.2 (ADP-ribosylation factor C1 )

HSP 1 Score: 322.4 bits (825), Expect = 2.2e-88
Identity = 155/173 (89.60%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MLFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 60
           M+F AKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG
Sbjct: 11  MMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGG 70

Query: 61  QERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDL 120
           Q+RLRTSWATYYRGTHAVI VIDSTDRARIS MKDEL RLLGH+DLQ SV+LVFANKQDL
Sbjct: 71  QDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSVILVFANKQDL 130

Query: 121 KDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGKTPS 174
           KDAMTP EITDAL+LHSIKNHDWHIQA  A+TG+GLYDGLGWIAQ+VTGK  S
Sbjct: 131 KDAMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKVTGKATS 183

[Close]

BLAST of Csor.00g253300 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 201.4 bits (511), Expect = 5.7e-52
Identity = 92/169 (54.44%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 2   LFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQ 61
           LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKNI F VWD+GGQ
Sbjct: 12  LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ 71

Query: 62  ERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLK 121
           +++R  W  Y++ T  +I V+DS DR R+   +DEL R+L  D+L+ +V+LVFANKQDL 
Sbjct: 72  DKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP 131

Query: 122 DAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 171
           +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++  + GK
Sbjct: 132 NAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

[Close]

BLAST of Csor.00g253300 vs. TAIR 10
Match: AT1G23490.1 (ADP-ribosylation factor 1 )

HSP 1 Score: 201.4 bits (511), Expect = 5.7e-52
Identity = 92/169 (54.44%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 2   LFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQ 61
           LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKNI F VWD+GGQ
Sbjct: 12  LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ 71

Query: 62  ERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLK 121
           +++R  W  Y++ T  +I V+DS DR R+   +DEL R+L  D+L+ +V+LVFANKQDL 
Sbjct: 72  DKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP 131

Query: 122 DAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 171
           +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++  + GK
Sbjct: 132 NAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

[Close]

BLAST of Csor.00g253300 vs. TAIR 10
Match: AT1G70490.3 (Ras-related small GTP-binding family protein )

HSP 1 Score: 201.4 bits (511), Expect = 5.7e-52
Identity = 92/169 (54.44%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 2   LFTAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQ 61
           LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKNI F VWD+GGQ
Sbjct: 12  LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ 71

Query: 62  ERLRTSWATYYRGTHAVIAVIDSTDRARISIMKDELFRLLGHDDLQQSVVLVFANKQDLK 121
           +++R  W  Y++ T  +I V+DS DR R+   +DEL R+L  D+L+ +V+LVFANKQDL 
Sbjct: 72  DKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP 131

Query: 122 DAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 171
           +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++  + GK
Sbjct: 132 NAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

The following BLAST results are available for this feature:

BLAST of Csor.00g253300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55AD9	8.0e-59	62.42	ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum OX=44689 GN=a...	[more]
Q9Y689	1.6e-54	57.83	ADP-ribosylation factor-like protein 5A OS=Homo sapiens OX=9606 GN=ARL5A PE=1 SV...	[more]
P51646	1.6e-54	57.83	ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus OX=10116 GN=Arl5a P...	[more]
Q80ZU0	2.7e-54	57.83	ADP-ribosylation factor-like protein 5A OS=Mus musculus OX=10090 GN=Arl5a PE=1 S...	[more]
Q2KJ96	3.5e-54	57.83	ADP-ribosylation factor-like protein 5A OS=Bos taurus OX=9913 GN=ARL5A PE=2 SV=1	[more]

BLAST of Csor.00g253300 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597406.1	9.40e-123	100.00	ADP-ribosylation factor-like protein 5, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022937092.1	1.10e-121	99.42	ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_022937100.1 ADP-...	[more]
XP_023538886.1	2.18e-120	99.42	ADP-ribosylation factor-like protein 5 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_008438599.1	2.13e-119	97.11	PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis melo]	[more]
XP_022975631.1	3.03e-119	97.69	ADP-ribosylation factor-like protein 5 isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g253300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FA74	5.32e-122	99.42	ADP-ribosylation factor-like protein 5 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A1S3AWS5	1.03e-119	97.11	ADP-ribosylation factor-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103483660 P...	[more]
A0A6J1IER4	1.47e-119	97.69	ADP-ribosylation factor-like protein 5 isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IE39	2.08e-119	97.69	ADP-ribosylation factor-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC1114747...	[more]
A0A5A7U254	9.11e-119	97.11	ADP-ribosylation factor-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Csor.00g253300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22950.1	2.2e-88	89.60	ADP-ribosylation factor C1	[more]
AT3G22950.2	2.2e-88	89.60	ADP-ribosylation factor C1	[more]
AT1G70490.1	5.7e-52	54.44	Ras-related small GTP-binding family protein	[more]
AT1G23490.1	5.7e-52	54.44	ADP-ribosylation factor 1	[more]
AT1G70490.3	5.7e-52	54.44	Ras-related small GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 9..32 score: 53.68 coord: 37..61 score: 44.47 coord: 64..89 score: 31.45 coord: 109..130 score: 27.27
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 1..167 e-value: 8.9E-16 score: 68.4
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 5..166 e-value: 8.4E-65 score: 217.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..171 e-value: 2.0E-72 score: 256.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 8..170 e-value: 6.1E-5 score: -48.1
None	No IPR available	PANTHER	PTHR11711:SF369	ADP-RIBOSYLATION FACTOR C1	coord: 1..173
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..173
None	No IPR available	PROSITE	PS51417	ARF	coord: 1..167 score: 22.990128
None	No IPR available	CDD	cd04153	Arl5_Arl8	coord: 1..166 e-value: 2.6967E-112 score: 314.673
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..172 e-value: 3.4E-67 score: 227.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..169
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 6..135 e-value: 7.4E-23 score: 79.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g253300.m01	Csor.00g253300.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:1903292	protein localization to Golgi membrane
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005802	trans-Golgi network
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding