Csor.00g252900 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g252900
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Prefoldin subunit
Location	Csor_Chr06: 9966757 .. 9967203 (-)
RNA-Seq Expression	Csor.00g252900
Synteny	Csor.00g252900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCATTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGGCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAGGGAGTCCTCGTAGGCCCTGCAGGTGAAAACTAA

mRNA sequence

ATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCATTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGGCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAGGGAGTCCTCGTAGGCCCTGCAGGTGAAAACTAA

Coding sequence (CDS)

ATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCATTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGGCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAGGGAGTCCTCGTAGGCCCTGCAGGTGAAAACTAA

Protein sequence

MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRKADGEAKEEDSGRKEGAAQGVLVGPAGEN

Homology

[Close]

BLAST of Csor.00g252900 vs. ExPASy Swiss-Prot
Match: Q9LJ98 (Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-41
Identity = 98/149 (65.77%), Postives = 117/149 (78.52%), Query Frame = 0


Query: 1   MASASES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KADGEAKEEDSGRKEGAAQGVLVGPAGEN 149
           K   E  +E   +KEG AQGVLVG A  +
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]

BLAST of Csor.00g252900 vs. ExPASy Swiss-Prot
Match: Q55GN3 (Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-22
Identity = 53/112 (47.32%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 7   SERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMI 66
           S++K+ + E  +   Y  L+S+  QI S+I+E E +  E+ LVI+AI+ L+ +R+C+RM+
Sbjct: 2   SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMV 61

Query: 67  GGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI 119
           GGVLVERT+ EVLP +++N++GI+EV+ +L+E L  K KE+ D  A YKIKI
Sbjct: 62  GGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

[Close]

BLAST of Csor.00g252900 vs. ExPASy Swiss-Prot
Match: A1A4P5 (Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.7e-21
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 3   SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           S+     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRKAD 122
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L + L+ K KE+ +   K+ I++   D
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 GE--AKEEDSGR-KEGAAQGVLV 143
            +  AKE   G   + ++ GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSAGVLV 153

[Close]

BLAST of Csor.00g252900 vs. ExPASy Swiss-Prot
Match: Q9UHV9 (Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.7e-21
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 3   SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           S+     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRKAD 122
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L + L+ K KE+ +   K+ I++   D
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 GE--AKEEDSGR-KEGAAQGVLV 143
            +  AKE   G   + ++ GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSAGVLV 153

[Close]

BLAST of Csor.00g252900 vs. ExPASy Swiss-Prot
Match: B0BN18 (Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.4e-21
Identity = 64/144 (44.44%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 3   SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 62
           S      K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRKAD 122
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L++ L+ K KE+ +   K+ I++   D
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 GE--AKE--EDSGRKEGAAQGVLV 143
            +  AKE  E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

[Close]

BLAST of Csor.00g252900 vs. NCBI nr
Match: KAG6597445.1 (putative prefoldin subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275 bits (702), Expect = 1.29e-92
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
           ADGEAKEEDSGRKEGAAQGVLVGPAGEN
Sbjct: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148

[Close]

BLAST of Csor.00g252900 vs. NCBI nr
Match: XP_022934448.1 (probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_022934456.1 probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_023540953.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023540954.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >KAG7028907.1 putative prefoldin subunit 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273 bits (697), Expect = 7.48e-92
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPAGEN
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGEN 148

[Close]

BLAST of Csor.00g252900 vs. NCBI nr
Match: XP_022973753.1 (probable prefoldin subunit 2 [Cucurbita maxima] >XP_022973754.1 probable prefoldin subunit 2 [Cucurbita maxima])

HSP 1 Score: 269 bits (688), Expect = 1.76e-90
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQ NKEGIEEVISRLNEALEKKKKEI DLEAKYKIKIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPAGEN
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGEN 148

[Close]

BLAST of Csor.00g252900 vs. NCBI nr
Match: XP_004141456.1 (probable prefoldin subunit 2 [Cucumis sativus] >XP_031740999.1 probable prefoldin subunit 2 [Cucumis sativus] >KGN52492.1 hypothetical protein Csa_008742 [Cucumis sativus])

HSP 1 Score: 266 bits (681), Expect = 2.06e-89
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS+SESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVISRLNEALEKKKKEI+DLEAKYKI+IRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPAGE+
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of Csor.00g252900 vs. NCBI nr
Match: XP_022956082.1 (probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefoldin subunit 2 [Cucurbita moschata] >KAG6582297.1 putative prefoldin subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018708.1 putative prefoldin subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263 bits (671), Expect = 6.89e-88
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS+SESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVISRLNEALEKKKKEI+DLEAKYKI+IRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPA E+
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

[Close]

BLAST of Csor.00g252900 vs. ExPASy TrEMBL
Match: A0A6J1F1V5 (probable prefoldin subunit 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441610 PE=3 SV=1)

HSP 1 Score: 273 bits (697), Expect = 3.62e-92
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPAGEN
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGEN 148

[Close]

BLAST of Csor.00g252900 vs. ExPASy TrEMBL
Match: A0A6J1IE30 (probable prefoldin subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111472323 PE=3 SV=1)

HSP 1 Score: 269 bits (688), Expect = 8.53e-91
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQ NKEGIEEVISRLNEALEKKKKEI DLEAKYKIKIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPAGEN
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGEN 148

[Close]

BLAST of Csor.00g252900 vs. ExPASy TrEMBL
Match: A0A0A0KVR4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=3 SV=1)

HSP 1 Score: 266 bits (681), Expect = 9.96e-90
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS+SESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVISRLNEALEKKKKEI+DLEAKYKI+IRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPAGE+
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of Csor.00g252900 vs. ExPASy TrEMBL
Match: A0A6J1INQ4 (probable prefoldin subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111479155 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 3.33e-88
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS+SESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVISRLNEALEKKKKEI+DLEAKYKI+IRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPA E+
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPANES 148

[Close]

BLAST of Csor.00g252900 vs. ExPASy TrEMBL
Match: A0A1S3C9H2 (probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 3.33e-88
Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60
           MAS+SESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVISRL+EALEKKKKEI+DLEAKYKI+IRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 ADGEAKEEDSGRKEGAAQGVLVGPAGEN 148
            DGEAKEEDSGRKEGAAQGVLVGPAGE+
Sbjct: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of Csor.00g252900 vs. TAIR 10
Match: AT3G22480.2 (prefoldin 2 )

HSP 1 Score: 171.0 bits (432), Expect = 7.1e-43
Identity = 98/149 (65.77%), Postives = 117/149 (78.52%), Query Frame = 0


Query: 1   MASASES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KADGEAKEEDSGRKEGAAQGVLVGPAGEN 149
           K   E  +E   +KEG AQGVLVG A  +
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]

BLAST of Csor.00g252900 vs. TAIR 10
Match: AT3G22480.1 (prefoldin 2 )

HSP 1 Score: 171.0 bits (432), Expect = 7.1e-43
Identity = 98/149 (65.77%), Postives = 117/149 (78.52%), Query Frame = 0


Query: 1   MASASES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KADGEAKEEDSGRKEGAAQGVLVGPAGEN 149
           K   E  +E   +KEG AQGVLVG A  +
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

The following BLAST results are available for this feature:

BLAST of Csor.00g252900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ98	1.0e-41	65.77	Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 S...	[more]
Q55GN3	3.0e-22	47.32	Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 ...	[more]
A1A4P5	5.7e-21	42.66	Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1	[more]
Q9UHV9	5.7e-21	42.66	Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1	[more]
B0BN18	7.4e-21	44.44	Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1	[more]

BLAST of Csor.00g252900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597445.1	1.29e-92	100.00	putative prefoldin subunit 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022934448.1	7.48e-92	99.32	probable prefoldin subunit 2 isoform X2 [Cucurbita moschata] >XP_022934456.1 pro...	[more]
XP_022973753.1	1.76e-90	97.97	probable prefoldin subunit 2 [Cucurbita maxima] >XP_022973754.1 probable prefold...	[more]
XP_004141456.1	2.06e-89	95.95	probable prefoldin subunit 2 [Cucumis sativus] >XP_031740999.1 probable prefoldi...	[more]
XP_022956082.1	6.89e-88	94.59	probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefo...	[more]

BLAST of Csor.00g252900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1V5	3.62e-92	99.32	probable prefoldin subunit 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1IE30	8.53e-91	97.97	probable prefoldin subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111472323 PE=3 SV...	[more]
A0A0A0KVR4	9.96e-90	95.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=3 SV=1	[more]
A0A6J1INQ4	3.33e-88	94.59	probable prefoldin subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111479155 PE=3 SV...	[more]
A0A1S3C9H2	3.33e-88	94.59	probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=3 SV=1	[more]

BLAST of Csor.00g252900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22480.2	7.1e-43	65.77	prefoldin 2	[more]
AT3G22480.1	7.1e-43	65.77	prefoldin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..120
None	No IPR available	COILS	Coil	Coil	coord: 22..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..148
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 19..116
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 16..120 e-value: 4.5E-26 score: 90.9
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 12..122 e-value: 7.2E-24 score: 85.7
IPR027235	Prefoldin subunit 2	PANTHER	PTHR13303	PREFOLDIN SUBUNIT 2	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g252900.m01	Csor.00g252900.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0051082	unfolded protein binding