Csor.00g252750 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g252750
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DEAD-box ATP-dependent RNA helicase 58, chloroplastic
Location	Csor_Chr06: 10041129 .. 10049587 (-)
RNA-Seq Expression	Csor.00g252750
Synteny	Csor.00g252750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACTTCAATTACGCCTTCATCTCTCTGGTTGTTCTTCTTCCTCTTGCACTACTCATTTTCCTATACCTAATTGTTCGTCCTCGCTCCGTTAAAATTCCTTTGAAGAATCGCCATGTCTTCATTACCGGCGGATCGAGCGGAATCGGGCTGGCGTTGGCACACCAGGCCGCATCGGAGGGCGCGCGAGTCTCCATTCTTGCGCGCTCTCTCAAGAAGCTCGAGGAAGCGAAGGACGCGATCAGACTCTCCACTGGTATTGATGTGGCGGTCTTCGCTGCCGATGTTCGAGATTACGATGCTATTTCCAAGGCTGTAGATGAAGCCGGGCCGATTGACGTTCTTGTTGTGAATCAAGGCGTGTTCGTACCTCAGGAGCTGGCAGAGCAAGATATGGATGAGGTGAAATTCATGTTAGATGTTAATTTGTTGGGCGCATTTCACATGATTAAGGCTGCCCTGCCTACGATGAAGAATAGAGTAGACCGTCGACCCGCCTCGATCGCTCTCATGTCTTCTCAGGCCGGTCAGGTAGTTGTGTTTCTATCTGCTTTCTACTTTATTGGGCAATTGCATTGATTATTTTTTAATATTCAAGTGACGCTTTAACATGTTGAAGGGTCAATTAATGAGCTCTCGTGGTGGTATGAGGTATGCGAGTAAATTATGTGCGCACACATAAAGGAGGGCGAATTAAGGCGCATAGATTGTTTACTGCTAGTATATAGGGTGTGCTTGGTCATAGTCATAGTGTTTAATCACCTCAAGTCTTTTTGATAGTATGAAAATACTTTGAATGGTTTGAGAGGAAGCATTTGATCAAGTACAAATAGAAAAAGTGTTGCCAAGTGCCAACTACTACTCTAGAGTGAACTTCTTCGATTGTTAGGGTCAATTTAATGACATTGATAACGTGCAGACACTCGCTGAGTTGAAAATTCAGTAGAAGTGGTAATCCTTTACTCACGAATTCCTATTGTAAATATGAGTAGGTGGGTGTTTATGGCTACACGGCGTATTCAGCTAGTAAGTTTGGGCTTCGTGGTTTGGCAGAAGCCTTGCAACAGGAGGTTATAGGAGATAACATACATATTTCTCTTATATTCCCTCCAGACACTGACACTCCTGGATTAGTAGAAGGTATGTATAAAGCAAGACCTGGTTTACCTTATTTTATTGTTCTGCTAGTCCTCAAGCAGGGTTTTAATATTTACTCAGTGGGTTGGATTTTTTAGCTCAGTTTTCAGCCCATTGGTTTAGGTTAGGATATGAGGTAAATGGTTGAAAGATAAACTAATTAGGGTATTACATGGCTAGGATTTATTTGAGCTAGTAGCCCTCTTCTTTGGATATCTCAGGTTATATGCTATTTTGAAGGTTGCATTGACAGAAATCCTTCAATTTATTATATAGAATTTTTTTTTAGTTTGTTTCTCCTTTTAAAAGTTACCTATCCTTAATCGCAGAGGAAAAGAAAAGGCCTGAATTGACCAATATCATTGCCGCTGGAGGAGGCAGGATGAAAGCTGAGTTAGTTGCCAAAAAAGCTTTGAATGGCATTAAATCTGGTAGCTTTATAATTCCCTGCAACTTTGAAGGAGCATTATTGTCCGTAGCAACTGCTGGCTTATCTCCTCAGAGATCTTGCTTGATGGCTTTCCTTGAAGTTGTTACTGCTGGGATAATAAGGATTGTGGGCTTGTGTTTTCAATGGGTTTGGTATGATAGTATTCAAAAATGGCATGCACAGAAAAAAAGTAAGTATTCATTCAAGTGATGAAACTATGAGCTTGTTCAATCCCTTGATTAATGTTAAGTTCTATAATTGTTTTTCTTTTATGGCACTCATTATTGCGCAAGAGATCTGGTTAAAATGCAGTCAAACTTTCACATAGTATCAAAAACTAATCAGATTTTGAATTACACAGTTATGCTATCACAGGTTCTTGTTTTTATTTATTTAATTTTTTTTTCCTTAAGATCACAATCTTCTTTGTCGTCTAATTTCTAGCATATGACGATGCGAGTGGTTTTGTTGTCCTGATTTCTCGTCAGCTGCCTTTCTAAACTCACTCCATTTTGAATGTCATATTACATCAGTATACTAATTATCTTATCTTTTGCCTTAAATTCTTATACCCTCAATGTCTGTTACAACGCCTCTAAGGCTGATCTATGCAGTGAATTAACTAGTGACAAATATCTGGATAATCCTGGAACTTGACACTGTCTTTTCAGTTTGCTCATTGATAGAAAACGGCTAGACTTGCATATAGTGCATTTGTTTTTGCATTTCTCCATCTGATTGTAACTTCAAGCCATTTGTTGAGTAACCTTATCCATGTCCTATTGCCAGGAATCTAGAAGATACGGCTGGTTTTTTCACAACAATTTCTTTCATTTATGGTTATTAGCTCCAAGTTCTCTCCTCCGAATTCTGAAACAACTGGAAGTAAAGGCTCGAGCCCGCTCTGATAAGTCGAACATTAGTTCAATATTTGGTGGGCAAAAGGTCAGGGATGACAGATTCAGTAGCAGTTCTCTCTCTTCCCCCAGTTTGACAGTAAGGCTTTCACGGTTGTTTACTCTTTTTCTCTCATGTTTTTTTAAGGTAGATCAGCAGCTGTAGGAACTGGATTTTCATCCCATCTTGTTAGGGTATCTTTTCTTACTGTATGCCATAGGGGGAAGTTGAATTAAGTTTCAAGAACATAATTTGATCAAGTTTAGACCTTTATGAGAGCTTTATCTTACTACAAACGGCAGAATAAGAGATTTTTCTTAGCAAATTAGTTGTGTTATTTGACAATTAGGCGTACACCAACGCCACTGCAAAACCATATCGAGTCTATTACAATTCTTGCTTGCTTCTTTTAATTTGACAGGAAGCAGCTGGAGATGGAGGGATTCTATGTATTGACTATTCTGACATGTTATTTCTAATACCAATTTCATAGTTAAATGTTAAATGAAAAGTGGGGACTTGGGAAATAATAAGTCTTCTAAATTCAGCCCCTATATGAACATGGGCTGAAATCTAATCTCATTCAACCATGATAGCTTGACCTTTGTAAAGGCAACTTAGGATTATGTTGTGTACCTTTACGAAGGAACTGCCATTGTTTGTTTTTTACAGGAAAGCCTGCATCAGAGCCCTTCAGTTATGTCTGATAGCCCGTACGTGGGGATCGACAAGTTTCTCTCTAGTATTGTCTATACGTGCAAGTAGGCTTATTGACTGAGCTCATGTTACGTCAATTATGTCGATTTCAACTAGCCAAATTGACTTTTCGTTTTGCTTTGCTCACTTCTAGTTCATAAACTATTTTGAATGGTCAAGTTTGAAATGAAACTTTCGATGACAGTACAAGCGCATAATCAAAATTTGTTACATATACCATTATTTTACAAGTTGCCATATTATATCTCTTTACCATTAATTTTTAATAAAAATTTTAATGAAAAAATAATTTTTTTTGAAGACTAATAACGGAATTAAAATTTATGTATTTTAAGAATTAATAATCAATTCAAGCAAAACTCAAGTAGGATCTATGCATTATCAACAAATTATAAAATAAATTCATTTTTTATAATTCTTTTAAATTGAAAAATTGGTATGAAGTAAATGTTTCTGTAAACTTAATTTTGAAATTAACAAATAAAAAATGTAATTTTTTTTTGTTTAAAAAAAAGTAAAAAAAAGTTTTAAAAATGTGATAATTTACCCAAAATTTTACCTTATCCAATACCCTTCTGAACTTATTTGAGACGATTGGGTTCCACAGTGCTCCGCCGCTCGCAGAAGCAAGACGGCGGTTGCTTCACCACCGGCGCCGGGAACTCTCCATTACGACCCGACTCCCCATTTTTCTTACACCCTCTTCATCTCCTCTTTCCTCCTTAATAACCCATCCTGTATTGCGTAGGCGCGGGATTCCATTTCCAATGGCCGCAACGCTTCTTCCGTCTACCAAAATTCCTCCCCCTTGGCTGCCCGTCTCATCTGAACGCCGCTATCCAATTTATTTACCCAAACTTATCAATAGCAATGGACCCATATGCTCCACCCCCAAATTTAGGCCTCTGAAAGCATTTATGAGCTCATCTTCTTTAAACAATGCCGTCGATTCTAATTTCGAGGCTTCCTCTCTCCGCGAGATCTGTAATGGATATGTTCCCGATCATATATTGGACAGGTAAGTGTCCATATTCCTCCATATCATGTGGGTTCCTTCTTAATTTATCATTTCTAATATTATGTCTTCTGGGGTGTTTTCTTTTCCCTTAATTTTCTTCTCTAAAATGATGTAGAGCTGAGGAAATTGGATTTGTTGCCCCAACTGGTGTGCAGAGGCAAGCTCTTCCAGTTCTGTTTTCTGGTCGGGATTGCGTGCTTCATGCGCAGGTCAAATCTATGTATTTCAAGTAAAATTCCTGCAGAATGTGGATGCTTAGTATTGTTTGTTTGTGTAAATTCTGTATATGGTTCTTTGCTTACTCTTATCCTTTTAGACAGGTTCTGGGAAGACGCTGACATATTTGCTATTGATATTTTCTGTAATCAACGCCCAGAAATCAGCTGTACAAGCACTGATTGTAGTACCCACCCGGGAGCTTGGAATTCAAGTAAGATTGGACTTTGTATCTTCCACTAATTTCATTTGTACTTATCTTTCATTCTGTAGTTCTGAAATCTGTTTTCTATTGCTGTTCTAAATGTGGGGGCGGGGTGTTTGGTTGATGCTTCTTATATGTTGATGGTAATGTTGTATTTGACCTGGTGGAATGGATGCCAGGTTACTAAAGTTGCTAGGATGTTAGCTGCAAAGCCTGCAACGGCGGATGAAGTTGGGGAGAAATCTTATGTTGTCATGGCTCTTTTAGATGGAGGCTTGTTGAGAAGACACAAGACTTGGTTGAAGGTGCTGCATTTGTCTCTTTTCTTCGTGCATAAAGTTTATTTGCATAAGTAGAAGTGTTTTGGCTAGATGGTTTGCAAAAAGTTGAATTACTTGTTGACAACATACGTTGTCTTGGCTTCTAATTGCATTGTCATCGGGTTTCGTTTCGAATTTCTTCAATTCGACACATGACGTTTGTAACGGCTCAAACCCACCGCTAACAGATACTGTCCTCTTTGGGTTTTCCCTTTCGGACTTCCCCTCAAACCTTTAAAACACGTCTACTAGGAAAAGGTTTCCACACCCATATAATGGGTGTTTCATTCTCCTCCTCAACCAATGTAGGATATCACAATCCACCCCCCTTCAGGGCCCAACGTCCTCGCTGACACTCGTTCCTTTCTACAATCGATGTGGAACCCTCACCAAATCCACTTCCCTTCAGGGCCTAACATCCTTAACTGGCACACCGTCTCGTATCTACCCCCTTTCGGGGAACAACCTCCTTGCTGGCACATCGCTTGATGTCTGGCTCTGATACCATTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTATCTTCTTTAGGCTTTCCCTTTTGGGCTTCCCCTCAAGACTTTAAAACGTGTCTGCTAGGGAAAGGTTTCTACACCCTTATAAAAGTTGTTTCGTTCTCCTCCCCAACCAACGTGGGATATCACAACCTTAGATTGTTTCTTTCCGATTCTCTTCACTTTCTTGGCTTGTGGTTAATAGTAAAGAAGTTTTCATCTAGATGGTAAGTTTGAGATATTAAAATTTTCAGGCAGATCCCCCTTCTATACTGGTGGCAACAGTAGGAAGCTTGTGTCAAATGGTTGAGAGGCGATTTCTTGATCTCGCCTCACTAAAGGTGCTGATAATTGACGAGGTACTTGCACAAAAAAAAGTTATTTTCAGTAAGCTTTTGGGTCATACTTTCATGACAAATCACGTAATTGGAAGGTCGTGTAGCTATAAACTGCTGATGAAGTAAGCTCATTCGAAACGTTTATTTCAAGGAATTGACGTTTTTTTTCCGCTCGTTTGCCAGGTTGATTTCATGTTTAGTTCCTCAAAGCAAGTTAGTTCTCTGAAGAAAATCTTGACATCATATTCTATGTTCAGTAATCGTCAGACTGTGTTTGCAAGTGCATCAATTCCCCAGCACAGGCATTTTCTTCAGGAATGCATACAGCAGAAGTGGACAAAGGTGTGTATATGGATGTCTTTTTGGTTACTTCCAATATGTGATGCAATTCAGCCATTAGTTTTATCTGCTTGTTAGAACTTTCCCTCTCTGTCTTGCAGAATAATGTAATCCATGTTCATATTAACGCCGTTCAGCCCATGCCATCGTGTCTACTCCATAGATTTGTGGTAAGAGATTTTATTGCTCATTCAGAAGTAATTATCCTCGGCCATCTCACTGGATATAGAGTTTCTTCTTTCTAATCATTTTGAGATGTAACTTGCTTAGATATTACCTTTTGTTTGACAGATGTGTGACAAGAACAAAAAACACCAAACCTTCCTGAGGGTACTACTCACAGATAAACCTCAGTCTGCAATCATTTTTGTCAGTGAGCAGGTTCGTGTTGATTGCCTTTTAAGTGAGATAAATAAGTACAATATTCCAAACTGCTATTGTAACAATTCAAGCCTATCGCTAGCAAATATTGTCCTCTTTGGTGTTTCTGTTTCGGGTTTGTTCTCAAGGTTTTTAAAACGCATCTTCTAAGGAGAGGTTTCCACACCCTTATAAGGAATTCTTCGTTCCCCTATCCAACCGATGTGGGATCTCACAATTCACCCCCCTTAGGAGCCCAGCGTCCTTGTTGGTACACCACCCGATGTCCGACTTTGATACCATTTGTAACAGCCGAAACCCACCACAGATATTGTCCTCTTTGGGCTTTCCCTTCCGAGTTTCCCTTCGAAGTTTTTTAAGATGCGTATTCTAGGGAGATATTTCCACACCCTTATAAGGAATGCTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCCTCTTGGGAGCCTAGCGTCCTTGTTGGTACATCGCCCGGTGTCTGACTTTGATACCATTTGTAACAGCTCAAGCCCACCGCATATATTGTCCTCTTTGGGCTTTTCTTTCCGGGTTTCCCTTCAAGGTTTTTAAAACGTGTGTTCTAGGGAGAGGTTTTCACACCCTTATAAGGAATGCTTCGTTTCCCTCTCCAACCAATGTGGGATCTCACAGCTATTTTCGCTTGAAGCTTTCAGATTGTTCATGGTTTACTATGCCATATCATATTTGCTACAAATCATCAATGAATCGAGGATCTTTTTTTCTTATGGGCTTTTTTTGTAATGTGGTTCCAAATATCATCTTCTATCGCCCTTGAAAGATTAAAATCGAGAAAACGTTTAATCGCAAATCATATTAAACTATAAGCATGTCTGTAGCTACATATCAATGCCCATTATAGGTTCATATTTTTTAGTCTTGAACTCTGGATTTGAGGCAAATCTAGTTCTAGAAAGCCAGTGCAATTTATTTGATCCTGTTACATTGGATTATCCTCTCTGCTCAATTTACTGAGCTCTTATTTTCAGTCAGAGAGGTCAAAGAAGGCTGGAAAGATTCCACCAGCAACCTTGATGATTGATTTCTTAAAGACTTCATATGATGGTTGTTCTGATGTCGTCCTTCTCGACGAAGACGTAAATTTCAATTCACGAGCAGCTTCCCTATCGGTTAGTATGCAATCTTTCTCCAACCATTAACTGAGCGCGGTGTTAGAACTGCAGTAGGATCATTTAACTGGGATGTGATATCTGATGATTCTGATCTGATATTCTAGCTAACTGTTTAAATAAGCATGTGTTCTGAACCTCTATATCATCTTCGTTTTTCATACCGATAGAGGTTAAGCATATTCTCGTTCCCTCTCCCTTCTTTCACTCTAAAGCAATTATGATCGGAGAGAATTTACACTCACAGATTTGTAAGAAACGGTTCATTGTCGATCTTGTTTACTCTTTACATAATTATATATATATCATCACTTTTTGTCCATTGGGTCGGTCCAAAGCACGACATTGTATATTGAGAAAAAACGAACTACGAATATCTCAATATTTGTTGCATAAGGAGAGAAAATGGAAAAGGAGAGTGAAACCCAATAGATGAATAAGCTTGTATTCAAAATCTCAGTATTTAATGTTGACTTGTAACATGTTTGTATTTGTGTTCTTGATTGTTTTGCAATGCAGGAAGTGAGACAAGGAGGAAGTTATCTTATTGTAGCAACTGACTTAGTGGCCAGGGGAATCGACTTACCCGAAACGACTCATATATACAACTTTGATCTACCTCAAACTGCCATCGACTATCTTCATCGAGCTGGACGAACAGGTAGGAAACCGTTTTCCGAGGATAAATGTATGGTTACTAATCTTATAACCTCAGTAGAGAGATTTGTTCTGCAAAAGTTTGAAAATGAACTACTGTTTACCTGTGATGAACTGGTTGTTTAG

mRNA sequence

ATGGCGGACTTCAATTACGCCTTCATCTCTCTGGTTGTTCTTCTTCCTCTTGCACTACTCATTTTCCTATACCTAATTGTTCGTCCTCGCTCCGTTAAAATTCCTTTGAAGAATCGCCATGTCTTCATTACCGGCGGATCGAGCGGAATCGGGCTGGCGTTGGCACACCAGGCCGCATCGGAGGGCGCGCGAGTCTCCATTCTTGCGCGCTCTCTCAAGAAGCTCGAGGAAGCGAAGGACGCGATCAGACTCTCCACTGGTATTGATGTGGCGGTCTTCGCTGCCGATGTTCGAGATTACGATGCTATTTCCAAGGCTGTAGATGAAGCCGGGCCGATTGACGTTCTTGTTGTGAATCAAGGCGTGTTCGTACCTCAGGAGCTGGCAGAGCAAGATATGGATGAGGTGAAATTCATGTTAGATGTTAATTTGTTGGGCGCATTTCACATGATTAAGGCTGCCCTGCCTACGATGAAGAATAGAGTAGACCGTCGACCCGCCTCGATCGCTCTCATGTCTTCTCAGGCCGGTCAGGTGGGTGTTTATGGCTACACGGCGTATTCAGCTAGTAAGTTTGGGCTTCGTGGTTTGGCAGAAGCCTTGCAACAGGAGGTTATAGGAGATAACATACATATTTCTCTTATATTCCCTCCAGACACTGACACTCCTGGATTAGTAGAAGAGGAAAAGAAAAGGCCTGAATTGACCAATATCATTGCCGCTGGAGGAGGCAGGATGAAAGCTGAGTTAGTTGCCAAAAAAGCTTTGAATGGCATTAAATCTGGATTGTGGGCTTGTGTTTTCAATGGGTTTGGTATGATAGTATTCAAAAATGGCATGCACAGAAAAAAAGAATCTAGAAGATACGGCTGGTTTTTTCACAACAATTTCTTTCATTTATGGTTATTAGCTCCAAGTTCTCTCCTCCGAATTCTGAAACAACTGGAAGTAAAGGCTCGAGCCCGCTCTGATAAGTCGAACATTAGTTCAATATTTGGTGGGCAAAAGGTCAGGGATGACAGATTCAGTAGCAGTTCTCTCTCTTCCCCCAGTTTGACAGAAAGCCTGCATCAGAGCCCTTCAGTTATGTCTGATAGCCCGTACGTGGGGATCGACAAGTTTCTCTCTAGTATTGTCTATACGTGCAATGCTCCGCCGCTCGCAGAAGCAAGACGGCGGTTGCTTCACCACCGGCGCCGGGAACTCTCCATTACGACCCGACTCCCCATTTTTCTTACACCCTCTTCATCTCCTCTTTCCTCCTTAATAACCCATCCTGTATTGCGTAGGCGCGGGATTCCATTTCCAATGGCCGCAACGCTTCTTCCGTCTACCAAAATTCCTCCCCCTTGGCTGCCCGTCTCATCTGAACGCCGCTATCCAATTTATTTACCCAAACTTATCAATAGCAATGGACCCATATGCTCCACCCCCAAATTTAGGCCTCTGAAAGCATTTATGAGCTCATCTTCTTTAAACAATGCCGTCGATTCTAATTTCGAGGCTTCCTCTCTCCGCGAGATCTGTAATGGATATGTTCCCGATCATATATTGGACAGAGCTGAGGAAATTGGATTTGTTGCCCCAACTGGTGTGCAGAGGCAAGCTCTTCCAGTTCTGTTTTCTGGTCGGGATTGCGTGCTTCATGCGCAGACAGGTTCTGGGAAGACGCTGACATATTTGCTATTGATATTTTCTGTAATCAACGCCCAGAAATCAGCTGTACAAGCACTGATTGTAGTACCCACCCGGGAGCTTGGAATTCAAGTTACTAAAGTTGCTAGGATGTTAGCTGCAAAGCCTGCAACGGCGGATGAAGTTGGGGAGAAATCTTATGTTGTCATGGCTCTTTTAGATGGAGGCTTGTTGAGAAGACACAAGACTTGGTTGAAGGCAGATCCCCCTTCTATACTGGTGGCAACAGTAGGAAGCTTGTGTCAAATGGTTGAGAGGCGATTTCTTGATCTCGCCTCACTAAAGGTGCTGATAATTGACGAGGTTGATTTCATGTTTAGTTCCTCAAAGCAAGTTAGTTCTCTGAAGAAAATCTTGACATCATATTCTATGTTCAGTAATCGTCAGACTGTGTTTGCAAGTGCATCAATTCCCCAGCACAGGCATTTTCTTCAGGAATGCATACAGCAGAAGTGGACAAAGAATAATGTAATCCATGTTCATATTAACGCCGTTCAGCCCATGCCATCGTGTCTACTCCATAGATTTGTGATGTGTGACAAGAACAAAAAACACCAAACCTTCCTGAGGGTACTACTCACAGATAAACCTCAGTCTGCAATCATTTTTGTCAGTGAGCAGTCAGAGAGGTCAAAGAAGGCTGGAAAGATTCCACCAGCAACCTTGATGATTGATTTCTTAAAGACTTCATATGATGGTTGTTCTGATGTCGTCCTTCTCGACGAAGACGTAAATTTCAATTCACGAGCAGCTTCCCTATCGGAAGTGAGACAAGGAGGAAGTTATCTTATTGTAGCAACTGACTTAGTGGCCAGGGGAATCGACTTACCCGAAACGACTCATATATACAACTTTGATCTACCTCAAACTGCCATCGACTATCTTCATCGAGCTGGACGAACAGGTAGGAAACCGTTTTCCGAGGATAAATGTATGGTTACTAATCTTATAACCTCAGTAGAGAGATTTGTTCTGCAAAAGTTTGAAAATGAACTACTGTTTACCTGTGATGAACTGGTTGTTTAG

Coding sequence (CDS)

ATGGCGGACTTCAATTACGCCTTCATCTCTCTGGTTGTTCTTCTTCCTCTTGCACTACTCATTTTCCTATACCTAATTGTTCGTCCTCGCTCCGTTAAAATTCCTTTGAAGAATCGCCATGTCTTCATTACCGGCGGATCGAGCGGAATCGGGCTGGCGTTGGCACACCAGGCCGCATCGGAGGGCGCGCGAGTCTCCATTCTTGCGCGCTCTCTCAAGAAGCTCGAGGAAGCGAAGGACGCGATCAGACTCTCCACTGGTATTGATGTGGCGGTCTTCGCTGCCGATGTTCGAGATTACGATGCTATTTCCAAGGCTGTAGATGAAGCCGGGCCGATTGACGTTCTTGTTGTGAATCAAGGCGTGTTCGTACCTCAGGAGCTGGCAGAGCAAGATATGGATGAGGTGAAATTCATGTTAGATGTTAATTTGTTGGGCGCATTTCACATGATTAAGGCTGCCCTGCCTACGATGAAGAATAGAGTAGACCGTCGACCCGCCTCGATCGCTCTCATGTCTTCTCAGGCCGGTCAGGTGGGTGTTTATGGCTACACGGCGTATTCAGCTAGTAAGTTTGGGCTTCGTGGTTTGGCAGAAGCCTTGCAACAGGAGGTTATAGGAGATAACATACATATTTCTCTTATATTCCCTCCAGACACTGACACTCCTGGATTAGTAGAAGAGGAAAAGAAAAGGCCTGAATTGACCAATATCATTGCCGCTGGAGGAGGCAGGATGAAAGCTGAGTTAGTTGCCAAAAAAGCTTTGAATGGCATTAAATCTGGATTGTGGGCTTGTGTTTTCAATGGGTTTGGTATGATAGTATTCAAAAATGGCATGCACAGAAAAAAAGAATCTAGAAGATACGGCTGGTTTTTTCACAACAATTTCTTTCATTTATGGTTATTAGCTCCAAGTTCTCTCCTCCGAATTCTGAAACAACTGGAAGTAAAGGCTCGAGCCCGCTCTGATAAGTCGAACATTAGTTCAATATTTGGTGGGCAAAAGGTCAGGGATGACAGATTCAGTAGCAGTTCTCTCTCTTCCCCCAGTTTGACAGAAAGCCTGCATCAGAGCCCTTCAGTTATGTCTGATAGCCCGTACGTGGGGATCGACAAGTTTCTCTCTAGTATTGTCTATACGTGCAATGCTCCGCCGCTCGCAGAAGCAAGACGGCGGTTGCTTCACCACCGGCGCCGGGAACTCTCCATTACGACCCGACTCCCCATTTTTCTTACACCCTCTTCATCTCCTCTTTCCTCCTTAATAACCCATCCTGTATTGCGTAGGCGCGGGATTCCATTTCCAATGGCCGCAACGCTTCTTCCGTCTACCAAAATTCCTCCCCCTTGGCTGCCCGTCTCATCTGAACGCCGCTATCCAATTTATTTACCCAAACTTATCAATAGCAATGGACCCATATGCTCCACCCCCAAATTTAGGCCTCTGAAAGCATTTATGAGCTCATCTTCTTTAAACAATGCCGTCGATTCTAATTTCGAGGCTTCCTCTCTCCGCGAGATCTGTAATGGATATGTTCCCGATCATATATTGGACAGAGCTGAGGAAATTGGATTTGTTGCCCCAACTGGTGTGCAGAGGCAAGCTCTTCCAGTTCTGTTTTCTGGTCGGGATTGCGTGCTTCATGCGCAGACAGGTTCTGGGAAGACGCTGACATATTTGCTATTGATATTTTCTGTAATCAACGCCCAGAAATCAGCTGTACAAGCACTGATTGTAGTACCCACCCGGGAGCTTGGAATTCAAGTTACTAAAGTTGCTAGGATGTTAGCTGCAAAGCCTGCAACGGCGGATGAAGTTGGGGAGAAATCTTATGTTGTCATGGCTCTTTTAGATGGAGGCTTGTTGAGAAGACACAAGACTTGGTTGAAGGCAGATCCCCCTTCTATACTGGTGGCAACAGTAGGAAGCTTGTGTCAAATGGTTGAGAGGCGATTTCTTGATCTCGCCTCACTAAAGGTGCTGATAATTGACGAGGTTGATTTCATGTTTAGTTCCTCAAAGCAAGTTAGTTCTCTGAAGAAAATCTTGACATCATATTCTATGTTCAGTAATCGTCAGACTGTGTTTGCAAGTGCATCAATTCCCCAGCACAGGCATTTTCTTCAGGAATGCATACAGCAGAAGTGGACAAAGAATAATGTAATCCATGTTCATATTAACGCCGTTCAGCCCATGCCATCGTGTCTACTCCATAGATTTGTGATGTGTGACAAGAACAAAAAACACCAAACCTTCCTGAGGGTACTACTCACAGATAAACCTCAGTCTGCAATCATTTTTGTCAGTGAGCAGTCAGAGAGGTCAAAGAAGGCTGGAAAGATTCCACCAGCAACCTTGATGATTGATTTCTTAAAGACTTCATATGATGGTTGTTCTGATGTCGTCCTTCTCGACGAAGACGTAAATTTCAATTCACGAGCAGCTTCCCTATCGGAAGTGAGACAAGGAGGAAGTTATCTTATTGTAGCAACTGACTTAGTGGCCAGGGGAATCGACTTACCCGAAACGACTCATATATACAACTTTGATCTACCTCAAACTGCCATCGACTATCTTCATCGAGCTGGACGAACAGGTAGGAAACCGTTTTCCGAGGATAAATGTATGGTTACTAATCTTATAACCTCAGTAGAGAGATTTGTTCTGCAAAAGTTTGAAAATGAACTACTGTTTACCTGTGATGAACTGGTTGTTTAG

Protein sequence

MADFNYAFISLVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAASEGARVSILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQGVFVPQELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVGVYGYTAYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIAAGGGRMKAELVAKKALNGIKSGLWACVFNGFGMIVFKNGMHRKKESRRYGWFFHNNFFHLWLLAPSSLLRILKQLEVKARARSDKSNISSIFGGQKVRDDRFSSSSLSSPSLTESLHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGPICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFTCDELVV

Homology

[Close]

BLAST of Csor.00g252750 vs. ExPASy Swiss-Prot
Match: Q3E9C3 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH58 PE=2 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 1.8e-165
Identity = 281/419 (67.06%), Postives = 350/419 (83.53%), Query Frame = 0


Query: 488 SSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVLFSGRDCV 547
           SS   +N+V       +LR+IC G+VP+HIL R EEIGFV PT +QR+ALP LF+GRDC+
Sbjct: 58  SSEIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCI 117

Query: 548 LHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAKPATADEV 607
           LHAQTGSGKTLTYLLLIFS+IN Q+S+VQA+IVVPTRELG+QVTKVARMLAAK     E+
Sbjct: 118 LHAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAK----SEI 177

Query: 608 GEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLKVLIIDEV 667
             K   VMALLDGG LRRHK+WLKA+PP+ILVATV SLC M+E+    + S++VL++DEV
Sbjct: 178 DVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEV 237

Query: 668 DFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKNNVIHVHI 727
           DF+F SSKQV S++K+LTS+S    RQTVFASASIPQH+HF+ +CIQQKWTK +V+HVH+
Sbjct: 238 DFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHV 297

Query: 728 NAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAGKIPPATL 787
           +A+ PMP CLLHRFVMC+K  KHQ  L +L +D P+SAIIFV EQSE+SKKAG  P  TL
Sbjct: 298 SAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTL 357

Query: 788 MIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGIDLPETTHI 847
           +++FLKTSY G  +++LL+ D+NFNSRAASL+E+RQGG +L+V+TD+ ARGIDLPETTHI
Sbjct: 358 LMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHI 417

Query: 848 YNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFTCDELVV 907
           +NFDLPQT  DYLHRAGR GRKPFS+ KC+V NLITS ERFVLQ++ENEL+F+C+E+++
Sbjct: 418 FNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVLQRYENELMFSCEEMML 472

[Close]

BLAST of Csor.00g252750 vs. ExPASy Swiss-Prot
Match: Q0JFN7 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0970600 PE=2 SV=2)

HSP 1 Score: 523.5 bits (1347), Expect = 4.8e-147
Identity = 259/435 (59.54%), Postives = 341/435 (78.39%), Query Frame = 0


Query: 475 CSTPKFRPLKAFMSSSSLNNAV---DSNFEASSLREICNGYVPDHILDRAEEIGFVAPTG 534
           C++P    L++ ++  +L + +        A++LRE+C G VP+H+L RAEE+G+V PT 
Sbjct: 7   CASPLSTTLRSGLAPFTLRHRLRLRRLRASAATLREVCAGRVPEHVLQRAEEVGYVVPTE 66

Query: 535 VQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVT 594
           VQ Q+LPVL SG+DC+LHAQTGSGKTL YLL +FS I+  +S+VQAL+VVPTRELG+QVT
Sbjct: 67  VQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAIDFGRSSVQALVVVPTRELGMQVT 126

Query: 595 KVARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVER 654
           KVAR+LAAK  T          VMALLDGG+LRR K+W+KA+PP+I+VATV SLCQM+E+
Sbjct: 127 KVARILAAKACT----------VMALLDGGMLRRQKSWVKAEPPAIIVATVASLCQMIEK 186

Query: 655 RFLDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQE 714
           R   L S++VL+IDEVDF+F SSKQVSSL+KILTSYS  S+RQT+FASASIPQH  F+ +
Sbjct: 187 RAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKILTSYSAASSRQTIFASASIPQHNRFVHD 246

Query: 715 CIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSE 774
           C+Q KWTK +V+HVH+N VQPMPS L H++ +C K ++    L +L  D P+S IIFV+E
Sbjct: 247 CVQHKWTKTDVVHVHVNPVQPMPSHLQHKYAICSKKERLHVLLSLLEKDAPKSGIIFVAE 306

Query: 775 QSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVA 834
           QSE+SKKAG  P  T++++FL+T+Y G  +V+LL+ED+NFN+RA S +EV+ G  +L+V+
Sbjct: 307 QSEKSKKAGHPPSTTVVVEFLRTTYMGSLEVLLLEEDMNFNARATSFTEVK-GKGFLLVS 366

Query: 835 TDLVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQ 894
           TD+ +RG DLP+T+HIYNFDLP+TAIDYLHRAGRTGR+PFS+  C VT LIT  E FVLQ
Sbjct: 367 TDIASRGFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSKLACSVTTLITEDEHFVLQ 426

Query: 895 KFENELLFTCDELVV 907
           +F+NEL F C+EL V
Sbjct: 427 RFQNELKFHCEELPV 430

[Close]

BLAST of Csor.00g252750 vs. ExPASy Swiss-Prot
Match: Q0WRJ2 (3-dehydrosphinganine reductase TSC10A OS=Arabidopsis thaliana OX=3702 GN=TSC10A PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.3e-96
Identity = 185/272 (68.01%), Postives = 230/272 (84.56%), Query Frame = 0


Query: 11  LVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAASEGARVSILAR 70
           L+ ++PL+LL  L LIVRPR +KIP+K+RH FITGGSSGIGLALAH+AASEGARVSILAR
Sbjct: 12  LIPIIPLSLLAILALIVRPRPIKIPIKSRHAFITGGSSGIGLALAHRAASEGARVSILAR 71

Query: 71  SLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQGVFVPQELAE 130
           S  KLEEAK +I+L+TG++VA F+ADVRDYDA+SKA+DE+GPIDVL+VNQGVF  +EL +
Sbjct: 72  SGSKLEEAKKSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFTAKELVK 131

Query: 131 QDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVGVYGYTAYSAS 190
              ++VKF +DVNL+G+F++IKAALP MK R DR PASI+L+SSQAGQVGVYGY AYSAS
Sbjct: 132 HSPEDVKFTIDVNLVGSFNVIKAALPAMKARKDRGPASISLVSSQAGQVGVYGYAAYSAS 191

Query: 191 KFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIAAGGGRMKAEL 250
           KFGL+GLA+ALQQEVI D+IH++LIFPPDT+TPG  EE+K RPE+T IIAA  G M+ E 
Sbjct: 192 KFGLQGLAQALQQEVISDDIHVTLIFPPDTNTPGFEEEQKSRPEVTAIIAASSGSMETEE 251

Query: 251 VAKKALNGIKSGLW--ACVFNGFGMIVFKNGM 281
           VAKKA++GIK+G +  +C F GF + +   GM
Sbjct: 252 VAKKAMDGIKAGNFTVSCNFEGFLLSLATTGM 283

[Close]

BLAST of Csor.00g252750 vs. ExPASy Swiss-Prot
Match: F4JZN6 (3-dehydrosphinganine reductase TSC10B OS=Arabidopsis thaliana OX=3702 GN=TSC10B PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 4.0e-93
Identity = 182/277 (65.70%), Postives = 224/277 (80.87%), Query Frame = 0


Query: 6   YAFISLVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAASEGARV 65
           ++     +L  ++LLI L  IVRPRSV IP+K RHVFITGGSSGIGLALAH+A SEGA+V
Sbjct: 5   FSLFLFFILFIVSLLIILSFIVRPRSVTIPIKFRHVFITGGSSGIGLALAHRAVSEGAKV 64

Query: 66  SILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQGVFVP 125
           SILARS +KL EAK +I+L+TG++VA F+ADVRDYDA+SKA+DE+GPIDVL+VNQGVF+ 
Sbjct: 65  SILARSTEKLAEAKRSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFIG 124

Query: 126 QELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVGVYGYT 185
           +EL +Q  +EVKFM+DVNL G+F++IKAALP MK R  R PASI+L+SSQAGQ G+YGYT
Sbjct: 125 KELEKQSPEEVKFMIDVNLTGSFNVIKAALPAMKAREGRGPASISLVSSQAGQAGIYGYT 184

Query: 186 AYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIAAGGGR 245
           AYSASKFGL+GLA+ALQQEVI D IH++L+FPPDTDTPG  +E KKRPELT+IIAA  G 
Sbjct: 185 AYSASKFGLQGLAQALQQEVISDGIHVTLLFPPDTDTPGFEQELKKRPELTSIIAASSGS 244

Query: 246 MKAELVAKKALNGIKSGLW--ACVFNGFGMIVFKNGM 281
           MK   VAK   +GIK+G +   C F GF + +   GM
Sbjct: 245 MKTNEVAKICFDGIKAGKFTVTCHFIGFLLSIASTGM 281

[Close]

BLAST of Csor.00g252750 vs. ExPASy Swiss-Prot
Match: Q06136 (3-ketodihydrosphingosine reductase OS=Homo sapiens OX=9606 GN=KDSR PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-36
Identity = 96/257 (37.35%), Postives = 156/257 (60.70%), Query Frame = 0


Query: 17  LALLIFLYLI---VRPRSVKIPLKNRHVFITGGSSGIGLALAHQAASEGARVSILARSLK 76
           +A ++ LY++   + P+ + +P    HV +TGGSSGIG  +A +   +GA ++++AR+  
Sbjct: 10  VAFVLLLYMVSPLISPKPLALP--GAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNED 69

Query: 77  KLEEAKDAIRLSTGID---VAVFAADV-RDYDAISKAVDEA----GPIDVLVVNQGVFVP 136
           KL +AK  I + +  D   V   + DV +DY+ +   + +A    GP+D+LV   G+ V 
Sbjct: 70  KLLQAKKEIEMHSINDKQVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGMAVS 129

Query: 137 QELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVGVYGYT 196
            +  + ++   + ++ +N LG+ +  +A + TMK   +RR   I  +SSQAGQ+G++G+T
Sbjct: 130 GKFEDLEVSTFERLMSINYLGSVYPSRAVITTMK---ERRVGRIVFVSSQAGQLGLFGFT 189

Query: 197 AYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIAAGGGR 256
           AYSASKF +RGLAEALQ EV   N++I++ +PPDTDTPG  EE + +P  T +I+     
Sbjct: 190 AYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTPGFAEENRTKPLETRLISETTSV 249

Query: 257 MKAELVAKKALNGIKSG 263
            K E VAK+ +     G
Sbjct: 250 CKPEQVAKQIVKDAIQG 261

[Close]

BLAST of Csor.00g252750 vs. NCBI nr
Match: KAG6597460.1 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1744 bits (4516), Expect = 0.0
Identity = 906/906 (100.00%), Postives = 906/906 (100.00%), Query Frame = 0


Query: 1   MADFNYAFISLVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAAS 60
           MADFNYAFISLVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAAS
Sbjct: 1   MADFNYAFISLVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAAS 60

Query: 61  EGARVSILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQ 120
           EGARVSILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQ
Sbjct: 61  EGARVSILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQ 120

Query: 121 GVFVPQELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVG 180
           GVFVPQELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVG
Sbjct: 121 GVFVPQELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVG 180

Query: 181 VYGYTAYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIA 240
           VYGYTAYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIA
Sbjct: 181 VYGYTAYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIA 240

Query: 241 AGGGRMKAELVAKKALNGIKSGLWACVFNGFGMIVFKNGMHRKKESRRYGWFFHNNFFHL 300
           AGGGRMKAELVAKKALNGIKSGLWACVFNGFGMIVFKNGMHRKKESRRYGWFFHNNFFHL
Sbjct: 241 AGGGRMKAELVAKKALNGIKSGLWACVFNGFGMIVFKNGMHRKKESRRYGWFFHNNFFHL 300

Query: 301 WLLAPSSLLRILKQLEVKARARSDKSNISSIFGGQKVRDDRFSSSSLSSPSLTESLHQSP 360
           WLLAPSSLLRILKQLEVKARARSDKSNISSIFGGQKVRDDRFSSSSLSSPSLTESLHQSP
Sbjct: 301 WLLAPSSLLRILKQLEVKARARSDKSNISSIFGGQKVRDDRFSSSSLSSPSLTESLHQSP 360

Query: 361 SVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPSSSPLS 420
           SVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPSSSPLS
Sbjct: 361 SVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPSSSPLS 420

Query: 421 SLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGPICSTPKF 480
           SLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGPICSTPKF
Sbjct: 421 SLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGPICSTPKF 480

Query: 481 RPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVL 540
           RPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVL
Sbjct: 481 RPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVL 540

Query: 541 FSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAK 600
           FSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAK
Sbjct: 541 FSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAK 600

Query: 601 PATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLK 660
           PATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLK
Sbjct: 601 PATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLK 660

Query: 661 VLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKN 720
           VLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKN
Sbjct: 661 VLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKN 720

Query: 721 NVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAG 780
           NVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAG
Sbjct: 721 NVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAG 780

Query: 781 KIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGID 840
           KIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGID
Sbjct: 781 KIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGID 840

Query: 841 LPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFT 900
           LPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFT
Sbjct: 841 LPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFT 900

Query: 901 CDELVV 906
           CDELVV
Sbjct: 901 CDELVV 906

[Close]

BLAST of Csor.00g252750 vs. NCBI nr
Match: KAG7028919.1 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1644 bits (4257), Expect = 0.0
Identity = 879/977 (89.97%), Postives = 890/977 (91.10%), Query Frame = 0


Query: 1   MADFNYAFISLVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAAS 60
           MADFNYAFISLV+LLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAAS
Sbjct: 1   MADFNYAFISLVLLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAAS 60

Query: 61  EGARVSILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQ 120
           EGARVSILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQ
Sbjct: 61  EGARVSILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQ 120

Query: 121 GVFVPQELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVG 180
           GVFVPQELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVG
Sbjct: 121 GVFVPQELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVG 180

Query: 181 VYGYTAYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIA 240
           VYGYTAYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIA
Sbjct: 181 VYGYTAYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIA 240

Query: 241 AGGGRMKAELVAKKALNGIKSGLWA--CVFNGFGMIVFKNGMHRKK-------------- 300
           AGGGRMKAELVAKKALNGIKSG +   C F G  + V   G+  ++              
Sbjct: 241 AGGGRMKAELVAKKALNGIKSGSFIIPCNFEGALLSVATAGLSPQRSCLMAFLEVVTAGI 300

Query: 301 ---ESRRYGWFFHNNFFHLWLLAPSSLLRILKQLEVKARARSDKSNISSIFGGQKVRDDR 360
              ESRRYGWFFHNNFFHLWLLAPSSLLRILKQLEVKARARSDKSNISSIFG QKVRDDR
Sbjct: 301 IRIESRRYGWFFHNNFFHLWLLAPSSLLRILKQLEVKARARSDKSNISSIFGRQKVRDDR 360

Query: 361 FSSSSLSSPSLTESLHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRE 420
           FSSSSLSSPSLTESLHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRE
Sbjct: 361 FSSSSLSSPSLTESLHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRE 420

Query: 421 LSITTRLPIFLTPSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYP 480
           LSITTRLPIFLTPSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRY 
Sbjct: 421 LSITTRLPIFLTPSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYS 480

Query: 481 IYLPKLINSNGPICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRA 540
           IYLPKLINSNGPICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRA
Sbjct: 481 IYLPKLINSNGPICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRA 540

Query: 541 EEIGFVAPTGVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVV 600
           EEIGFVAPTGVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVV
Sbjct: 541 EEIGFVAPTGVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVV 600

Query: 601 PTRELGIQVTKVARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLK---------- 660
           PTRELGIQVTKVARMLAAKPATADEVG+KSYVVMALLDGGLLRRHKTWLK          
Sbjct: 601 PTRELGIQVTKVARMLAAKPATADEVGQKSYVVMALLDGGLLRRHKTWLKGPTSSLTLVP 660

Query: 661 ------------------------------------------ADPPSILVATVGSLCQMV 720
                                                     ADPP ILVATVGSLCQMV
Sbjct: 661 FYDRCGTLTKSTSLQGLTSLTGTPSRIYPPSGNNLLAGTSLDADPPCILVATVGSLCQMV 720

Query: 721 ERRFLDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFL 780
           ERRFLDLASLKVL+IDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFL
Sbjct: 721 ERRFLDLASLKVLVIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFL 780

Query: 781 QECIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFV 840
           QECIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFL VLLTDKP+SAIIFV
Sbjct: 781 QECIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLSVLLTDKPRSAIIFV 840

Query: 841 SEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLI 900
           SEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLI
Sbjct: 841 SEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLI 900

Query: 901 VATDLVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFV 906
           VATDLVARGIDLPETTHIYNFDLP+TAIDYLHRAGRTGRKPFSE+KCMVTNLITSVERFV
Sbjct: 901 VATDLVARGIDLPETTHIYNFDLPRTAIDYLHRAGRTGRKPFSEEKCMVTNLITSVERFV 960

[Close]

BLAST of Csor.00g252750 vs. NCBI nr
Match: XP_023539234.1 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1051 bits (2717), Expect = 0.0
Identity = 540/560 (96.43%), Postives = 550/560 (98.21%), Query Frame = 0


Query: 352 LTESLHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIF 411
           L ES+HQSPSVMSDSPY+GIDKFLSSIVYTC+APPLAEARRRLLHHRRR+LSITTRLPI 
Sbjct: 14  LQESMHQSPSVMSDSPYLGIDKFLSSIVYTCSAPPLAEARRRLLHHRRRKLSITTRLPIS 73

Query: 412 LTPSSS-----PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPK 471
           LTPSSS     PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLP 
Sbjct: 74  LTPSSSSSSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPN 133

Query: 472 LINSNGPICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGF 531
           LINSNGPICSTPKFRP KAFMSSSSLNNAVDSNFEAS+LREICNGYVPDHILDRAEEIGF
Sbjct: 134 LINSNGPICSTPKFRPPKAFMSSSSLNNAVDSNFEASTLREICNGYVPDHILDRAEEIGF 193

Query: 532 VAPTGVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTREL 591
           VAPTGVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTREL
Sbjct: 194 VAPTGVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTREL 253

Query: 592 GIQVTKVARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLC 651
           GIQVTKVARMLAAKPATADEVG+KSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLC
Sbjct: 254 GIQVTKVARMLAAKPATADEVGQKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLC 313

Query: 652 QMVERRFLDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHR 711
           QMVERRFLDLASL+VL+IDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHR
Sbjct: 314 QMVERRFLDLASLRVLVIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHR 373

Query: 712 HFLQECIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAI 771
           HFLQECIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFL VLLTDKPQSAI
Sbjct: 374 HFLQECIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLSVLLTDKPQSAI 433

Query: 772 IFVSEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGS 831
           IFVSEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGS
Sbjct: 434 IFVSEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGS 493

Query: 832 YLIVATDLVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVE 891
           YLIVATDLVARGIDLPETTHIYNFDLP+TAIDYLHRAGRTGRKPFSE+KCMVTNLITSVE
Sbjct: 494 YLIVATDLVARGIDLPETTHIYNFDLPRTAIDYLHRAGRTGRKPFSEEKCMVTNLITSVE 553

Query: 892 RFVLQKFENELLFTCDELVV 906
           RFVLQKFENELLFTCDELVV
Sbjct: 554 RFVLQKFENELLFTCDELVV 573

[Close]

BLAST of Csor.00g252750 vs. NCBI nr
Match: XP_022933736.1 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1051 bits (2717), Expect = 0.0
Identity = 540/553 (97.65%), Postives = 546/553 (98.73%), Query Frame = 0


Query: 356 LHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPS 415
           +HQSPSVMSDSPYVGIDKFLS IVYTCNAPPLAEARRRLLHHRRRELSITTRLPI LTPS
Sbjct: 1   MHQSPSVMSDSPYVGIDKFLSIIVYTCNAPPLAEARRRLLHHRRRELSITTRLPISLTPS 60

Query: 416 SS--PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGP 475
           SS  PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLIN+NGP
Sbjct: 61  SSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINNNGP 120

Query: 476 ICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQ 535
           ICSTPKFRP KAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQ
Sbjct: 121 ICSTPKFRPPKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQ 180

Query: 536 RQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV 595
           RQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV
Sbjct: 181 RQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV 240

Query: 596 ARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRF 655
           ARMLAAKPATADEVG+KSYVVMALLDGGLLRRHKTWLKADPP ILVATVGSLCQMVERRF
Sbjct: 241 ARMLAAKPATADEVGQKSYVVMALLDGGLLRRHKTWLKADPPCILVATVGSLCQMVERRF 300

Query: 656 LDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI 715
           LDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI
Sbjct: 301 LDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI 360

Query: 716 QQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQS 775
           QQKWTKNN+IHVHINAVQPMPSCLLHRFVMCDKNKKHQTFL VLLTDKPQSAIIFVSEQS
Sbjct: 361 QQKWTKNNIIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLSVLLTDKPQSAIIFVSEQS 420

Query: 776 ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATD 835
           ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATD
Sbjct: 421 ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATD 480

Query: 836 LVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKF 895
           LVARGIDLPETTHIYNFDLP+TAIDYLHRAGRTGRKPFSE+KCMVTNLITSVERFVLQKF
Sbjct: 481 LVARGIDLPETTHIYNFDLPRTAIDYLHRAGRTGRKPFSEEKCMVTNLITSVERFVLQKF 540

Query: 896 ENELLFTCDELVV 906
           ENELLFTCDELVV
Sbjct: 541 ENELLFTCDELVV 553

[Close]

BLAST of Csor.00g252750 vs. NCBI nr
Match: XP_022973672.1 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1018 bits (2631), Expect = 0.0
Identity = 522/553 (94.39%), Postives = 540/553 (97.65%), Query Frame = 0


Query: 356 LHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPS 415
           +HQ PSV SD P++ IDKFLS +V+TC+APPLAEARRRLLHHRRRELSITTRLPI LTPS
Sbjct: 1   MHQRPSVTSDIPHLAIDKFLSIVVHTCSAPPLAEARRRLLHHRRRELSITTRLPISLTPS 60

Query: 416 SS--PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGP 475
           SS  PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPP LPVSSERR+P+YLPKLINSNGP
Sbjct: 61  SSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPRLPVSSERRHPVYLPKLINSNGP 120

Query: 476 ICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQ 535
           ICSTPKFRP KAFMSSSS NNAVDSNFEAS+LREICNGYVPDHILDRAEEIGFVAPTGVQ
Sbjct: 121 ICSTPKFRPSKAFMSSSSSNNAVDSNFEASTLREICNGYVPDHILDRAEEIGFVAPTGVQ 180

Query: 536 RQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV 595
           RQALPVLFSG+DCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV
Sbjct: 181 RQALPVLFSGQDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV 240

Query: 596 ARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRF 655
           ARMLAAKPATADEVG+KSYVVMALLDGGLLRRHKTWLKADP SILVATVGSLCQMVERRF
Sbjct: 241 ARMLAAKPATADEVGQKSYVVMALLDGGLLRRHKTWLKADPSSILVATVGSLCQMVERRF 300

Query: 656 LDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI 715
           LDLASLKVL+IDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI
Sbjct: 301 LDLASLKVLVIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI 360

Query: 716 QQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQS 775
           QQKWTKNNVIH+HINAVQPMPSCLLHRFV+CDKNKKHQTFL VLLTDKPQSAIIFVSEQS
Sbjct: 361 QQKWTKNNVIHIHINAVQPMPSCLLHRFVICDKNKKHQTFLSVLLTDKPQSAIIFVSEQS 420

Query: 776 ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATD 835
           ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRA+SLSEVRQGGSYLIVATD
Sbjct: 421 ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRASSLSEVRQGGSYLIVATD 480

Query: 836 LVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKF 895
           LVARGIDLPETTHIYNFDLP+TAIDYLHRAGRTGRKPFSE+KC+VTNLITSVERFVLQKF
Sbjct: 481 LVARGIDLPETTHIYNFDLPRTAIDYLHRAGRTGRKPFSEEKCVVTNLITSVERFVLQKF 540

Query: 896 ENELLFTCDELVV 906
           ENELLFTCDELVV
Sbjct: 541 ENELLFTCDELVV 553

[Close]

BLAST of Csor.00g252750 vs. ExPASy TrEMBL
Match: A0A6J1EZV7 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441060 PE=4 SV=1)

HSP 1 Score: 1051 bits (2717), Expect = 0.0
Identity = 540/553 (97.65%), Postives = 546/553 (98.73%), Query Frame = 0


Query: 356 LHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPS 415
           +HQSPSVMSDSPYVGIDKFLS IVYTCNAPPLAEARRRLLHHRRRELSITTRLPI LTPS
Sbjct: 1   MHQSPSVMSDSPYVGIDKFLSIIVYTCNAPPLAEARRRLLHHRRRELSITTRLPISLTPS 60

Query: 416 SS--PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGP 475
           SS  PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLIN+NGP
Sbjct: 61  SSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINNNGP 120

Query: 476 ICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQ 535
           ICSTPKFRP KAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQ
Sbjct: 121 ICSTPKFRPPKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQ 180

Query: 536 RQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV 595
           RQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV
Sbjct: 181 RQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV 240

Query: 596 ARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRF 655
           ARMLAAKPATADEVG+KSYVVMALLDGGLLRRHKTWLKADPP ILVATVGSLCQMVERRF
Sbjct: 241 ARMLAAKPATADEVGQKSYVVMALLDGGLLRRHKTWLKADPPCILVATVGSLCQMVERRF 300

Query: 656 LDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI 715
           LDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI
Sbjct: 301 LDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI 360

Query: 716 QQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQS 775
           QQKWTKNN+IHVHINAVQPMPSCLLHRFVMCDKNKKHQTFL VLLTDKPQSAIIFVSEQS
Sbjct: 361 QQKWTKNNIIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLSVLLTDKPQSAIIFVSEQS 420

Query: 776 ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATD 835
           ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATD
Sbjct: 421 ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATD 480

Query: 836 LVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKF 895
           LVARGIDLPETTHIYNFDLP+TAIDYLHRAGRTGRKPFSE+KCMVTNLITSVERFVLQKF
Sbjct: 481 LVARGIDLPETTHIYNFDLPRTAIDYLHRAGRTGRKPFSEEKCMVTNLITSVERFVLQKF 540

Query: 896 ENELLFTCDELVV 906
           ENELLFTCDELVV
Sbjct: 541 ENELLFTCDELVV 553

[Close]

BLAST of Csor.00g252750 vs. ExPASy TrEMBL
Match: A0A6J1I860 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111472257 PE=4 SV=1)

HSP 1 Score: 1018 bits (2631), Expect = 0.0
Identity = 522/553 (94.39%), Postives = 540/553 (97.65%), Query Frame = 0


Query: 356 LHQSPSVMSDSPYVGIDKFLSSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPS 415
           +HQ PSV SD P++ IDKFLS +V+TC+APPLAEARRRLLHHRRRELSITTRLPI LTPS
Sbjct: 1   MHQRPSVTSDIPHLAIDKFLSIVVHTCSAPPLAEARRRLLHHRRRELSITTRLPISLTPS 60

Query: 416 SS--PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGP 475
           SS  PLSSLITHPVLRRRGIPFPMAATLLPSTKIPPP LPVSSERR+P+YLPKLINSNGP
Sbjct: 61  SSSSPLSSLITHPVLRRRGIPFPMAATLLPSTKIPPPRLPVSSERRHPVYLPKLINSNGP 120

Query: 476 ICSTPKFRPLKAFMSSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQ 535
           ICSTPKFRP KAFMSSSS NNAVDSNFEAS+LREICNGYVPDHILDRAEEIGFVAPTGVQ
Sbjct: 121 ICSTPKFRPSKAFMSSSSSNNAVDSNFEASTLREICNGYVPDHILDRAEEIGFVAPTGVQ 180

Query: 536 RQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV 595
           RQALPVLFSG+DCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV
Sbjct: 181 RQALPVLFSGQDCVLHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKV 240

Query: 596 ARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRF 655
           ARMLAAKPATADEVG+KSYVVMALLDGGLLRRHKTWLKADP SILVATVGSLCQMVERRF
Sbjct: 241 ARMLAAKPATADEVGQKSYVVMALLDGGLLRRHKTWLKADPSSILVATVGSLCQMVERRF 300

Query: 656 LDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI 715
           LDLASLKVL+IDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI
Sbjct: 301 LDLASLKVLVIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECI 360

Query: 716 QQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQS 775
           QQKWTKNNVIH+HINAVQPMPSCLLHRFV+CDKNKKHQTFL VLLTDKPQSAIIFVSEQS
Sbjct: 361 QQKWTKNNVIHIHINAVQPMPSCLLHRFVICDKNKKHQTFLSVLLTDKPQSAIIFVSEQS 420

Query: 776 ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATD 835
           ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRA+SLSEVRQGGSYLIVATD
Sbjct: 421 ERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRASSLSEVRQGGSYLIVATD 480

Query: 836 LVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKF 895
           LVARGIDLPETTHIYNFDLP+TAIDYLHRAGRTGRKPFSE+KC+VTNLITSVERFVLQKF
Sbjct: 481 LVARGIDLPETTHIYNFDLPRTAIDYLHRAGRTGRKPFSEEKCVVTNLITSVERFVLQKF 540

Query: 896 ENELLFTCDELVV 906
           ENELLFTCDELVV
Sbjct: 541 ENELLFTCDELVV 553

[Close]

BLAST of Csor.00g252750 vs. ExPASy TrEMBL
Match: A0A7G2F8P4 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS19548 PE=4 SV=1)

HSP 1 Score: 864 bits (2232), Expect = 1.11e-303
Identity = 481/891 (53.98%), Postives = 600/891 (67.34%), Query Frame = 0


Query: 18  ALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAASEGARVSILARSLKKLEE 77
           +LLI L  IVRPRSV IP+K RHVFITGGSSGIGLALAH+A SEGA+VSILARS +KL E
Sbjct: 17  SLLIILSFIVRPRSVTIPIKFRHVFITGGSSGIGLALAHRAVSEGAKVSILARSTEKLAE 76

Query: 78  AKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQGVFVPQELAEQDMDEVK 137
           AK +I+L+TG++VA F+ADVRDYDA+SKA+DE+GPIDVL+VNQGVF+ +EL +Q  +EVK
Sbjct: 77  AKRSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFIGKELEKQSPEEVK 136

Query: 138 FMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVGVYGYTAYSASKFGLRGL 197
           FM+DVNL G+F++IKAALP MK R  R PASI+L+SSQAGQ G+YGYTAYSASKFGL+GL
Sbjct: 137 FMIDVNLTGSFNVIKAALPAMKAREGRGPASISLVSSQAGQAGIYGYTAYSASKFGLQGL 196

Query: 198 AEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIAAGGGRMKAELVAKKALN 257
           A+ALQQEVI D+IH++L+FPPDTDTPG  +E KKRPELT+IIAA  G MK + VAK   +
Sbjct: 197 AQALQQEVISDDIHVTLLFPPDTDTPGFEQELKKRPELTSIIAASSGSMKTKEVAKICFD 256

Query: 258 GIKSGLWA--CVFNGFGMIVFKNGMHRKKESRRYGWFFHNNFFHLWLLAPSSLLRILKQL 317
           GIK+G +   C F GF + +   GM  +                 WL    +L+ +    
Sbjct: 257 GIKAGKFTVTCHFIGFLLSIASTGMSPQGS--------------FWL----ALIEV---- 316

Query: 318 EVKARARSDKSNISSIFGGQKVRDDRFSSSSLSSPSLTESLHQSPSVMSDSPYVGIDKFL 377
                          IFGG                                    + +F+
Sbjct: 317 ---------------IFGG------------------------------------LIRFV 376

Query: 378 SSIVYTCNAPPLAEARRRLLHHRRRELSITTRLPIFLTPSSSPLSSLITHPVLRRRGIPF 437
           S +V+       + + RR L        I  +L      SS   SS +T P         
Sbjct: 377 S-LVFQWQCVFHSTSTRRALKSSSNSRII--KLQAVAETSSEIESSSVTEPT-------- 436

Query: 438 PMAATLLPSTKIPPPWLPVSSERRYPIYLPKLINSNGPICSTPKFRPLKAFMSSSSLNNA 497
                                                                       
Sbjct: 437 ------------------------------------------------------------ 496

Query: 498 VDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVLFSGRDCVLHAQTGSG 557
                 A +LR+IC GYVP+HIL R EEIGFV PT +QR+ALP LF+GRDC+LHAQTGSG
Sbjct: 497 ------ALTLRQICQGYVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSG 556

Query: 558 KTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAKPATADEVGEKSYVVM 617
           KTLTYLLLIFS+IN Q+S+VQA+IVVPTRELG+QVTKVARMLAAK     E+  K   VM
Sbjct: 557 KTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAK----SEIDVKGCTVM 616

Query: 618 ALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLKVLIIDEVDFMFSSSK 677
           ALLDGG LRRHK+WLKA+PP+ILVATV SLC M+E+    + S++VL++DEVDF+F SSK
Sbjct: 617 ALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSK 676

Query: 678 QVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKNNVIHVHINAVQPMPS 737
           QV S++K+LTS+S    RQTVFASASIPQH+HF+ +CIQQKWTK +V+HVH++A+ PMP 
Sbjct: 677 QVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPL 736

Query: 738 CLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAGKIPPATLMIDFLKTS 797
           CLLHRFVMC+K  KHQ  L +L +D P+SAIIFV EQSE+SKKAG  P  TL+++FLKTS
Sbjct: 737 CLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTS 753

Query: 798 YDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGIDLPETTHIYNFDLPQT 857
           Y G  +++LL+ D+NFNSRAASL+E+RQGG +L+V+TD+ ARGIDLPETTHI+NFDLPQT
Sbjct: 797 YKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQT 753

Query: 858 AIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFTCDELVV 906
             DYLHRAGR GRKPFS+ KC+V NLITS ERFVLQ++ENEL+F+C+E+++
Sbjct: 857 VTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVLQRYENELMFSCEEMML 753

[Close]

BLAST of Csor.00g252750 vs. ExPASy TrEMBL
Match: A0A6J1C9C7 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009507 PE=4 SV=1)

HSP 1 Score: 778 bits (2009), Expect = 2.43e-274
Identity = 394/474 (83.12%), Postives = 436/474 (91.98%), Query Frame = 0


Query: 437 MAATLLPSTKIPPPWLPVSSERRYPIY----LPKLINSNGPICSTPKFRPLKAFMSSSSL 496
           MAATLLP+TK PPPWL +SSER +P+Y    LPK  NSNGP+CST KFRP  AF SS SL
Sbjct: 1   MAATLLPTTKSPPPWLLLSSERLHPVYFSVQLPKFNNSNGPLCSTSKFRPPLAFPSSFSL 60

Query: 497 NNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVLFSGRDCVLHAQT 556
           NN VDSNFEAS+LREIC+G+VPDHIL RAEEIGFVAPT VQRQALPVLFSGRDCVLHAQT
Sbjct: 61  NNVVDSNFEASTLREICDGHVPDHILRRAEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT 120

Query: 557 GSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAKPATADEVGEKSY 616
           GSGKTLTYLLLIFS+INAQ+SAVQAL+VVPTRELG+QVTKVARMLAAK A A E+G+KSY
Sbjct: 121 GSGKTLTYLLLIFSIINAQRSAVQALVVVPTRELGMQVTKVARMLAAKSA-ASELGQKSY 180

Query: 617 VVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLKVLIIDEVDFMFS 676
           VVMALLDGGLLRRHK WLKADPP+ILVATVGSLCQMVER+FLDL SL VL+IDEVDFMFS
Sbjct: 181 VVMALLDGGLLRRHKNWLKADPPAILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFS 240

Query: 677 SSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKNNVIHVHINAVQP 736
           SSKQVSSLKK+LTSYS FSNRQT+FASASIPQHRHFL +CIQQKWTKN+V+H+H+N +QP
Sbjct: 241 SSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLHDCIQQKWTKNDVMHIHVNPMQP 300

Query: 737 MPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAGKIPPATLMIDFL 796
           MPSCLLHRFV+CDKNKKHQTF  +LLTD+PQSAIIFVSEQSE+SKKAG I P T+MIDFL
Sbjct: 301 MPSCLLHRFVICDKNKKHQTFRSLLLTDEPQSAIIFVSEQSEKSKKAGNISPTTMMIDFL 360

Query: 797 KTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGIDLPETTHIYNFDL 856
           KTSY G SD++LL+ED+N+N RA+SLSEVRQGG YLIVATD+VARGIDLPETTHIYNFDL
Sbjct: 361 KTSYGGYSDIILLEEDMNYNLRASSLSEVRQGGGYLIVATDIVARGIDLPETTHIYNFDL 420

Query: 857 PQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFTCDELVV 906
           P+TAIDYLHRAGRTGRKPFS++KC+V NLITS ERFVLQKFENELLF C+ELVV
Sbjct: 421 PRTAIDYLHRAGRTGRKPFSKEKCVVNNLITSQERFVLQKFENELLFFCEELVV 473

[Close]

BLAST of Csor.00g252750 vs. ExPASy TrEMBL
Match: A0A1S3AX19 (DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483729 PE=4 SV=1)

HSP 1 Score: 776 bits (2003), Expect = 1.97e-273
Identity = 397/474 (83.76%), Postives = 428/474 (90.30%), Query Frame = 0


Query: 437 MAATLLPSTKIPPPWLPVSSERRYPIYL----PKLINSNGPICSTPKFRPLKAFMSSSSL 496
           MAAT LP+TK PPPWL +SSER +P++L    P  IN+NGPI ST KFRPL+A MSSSSL
Sbjct: 1   MAATFLPTTKFPPPWLLLSSERPFPVHLSFQLPNFINTNGPIYSTSKFRPLQALMSSSSL 60

Query: 497 NNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVLFSGRDCVLHAQT 556
            N  +SNFE S+LREICNG VP+HIL R EEIGFVAPT VQRQALPVLFSGRDCVLHAQT
Sbjct: 61  KNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT 120

Query: 557 GSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAKPATADEVGEKSY 616
           GSGKTLTYLLLIFSVINA KSAVQALIVVPTRELG+QVTKVARMLAAKPA A E G  SY
Sbjct: 121 GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPA-ASEDGLNSY 180

Query: 617 VVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLKVLIIDEVDFMFS 676
           VVMALLDGGLLRRHKTWLKADPP ILVATVGSLCQMVER+FLDL SL VL+IDEVDFMFS
Sbjct: 181 VVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFS 240

Query: 677 SSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKNNVIHVHINAVQP 736
           SSKQVSSLKK+LTSYS FSNRQT+FASASIPQHRHFLQ+CIQQKWTKN VIH+HIN+ QP
Sbjct: 241 SSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQP 300

Query: 737 MPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAGKIPPATLMIDFL 796
           MPSCLLHRFV C+KNKKHQT L +LLTD PQSAIIFVSEQSE+SKKAGKIPP TLMIDFL
Sbjct: 301 MPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFL 360

Query: 797 KTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGIDLPETTHIYNFDL 856
           K SY GCSDV+LL+EDVN+N RA+SLSEVRQGG YLIVATD+VARGIDLPETTHIYNFDL
Sbjct: 361 KASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDL 420

Query: 857 PQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFTCDELVV 906
           P+ AIDYLHRAGRTGRKPFSE+KC+VTNLITS ERFVLQKFENELLF C+E+ V
Sbjct: 421 PRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 473

[Close]

BLAST of Csor.00g252750 vs. TAIR 10
Match: AT5G19210.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 584.7 bits (1506), Expect = 1.3e-166
Identity = 281/419 (67.06%), Postives = 350/419 (83.53%), Query Frame = 0


Query: 488 SSSSLNNAVDSNFEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVLFSGRDCV 547
           SS   +N+V       +LR+IC G+VP+HIL R EEIGFV PT +QR+ALP LF+GRDC+
Sbjct: 58  SSEIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCI 117

Query: 548 LHAQTGSGKTLTYLLLIFSVINAQKSAVQALIVVPTRELGIQVTKVARMLAAKPATADEV 607
           LHAQTGSGKTLTYLLLIFS+IN Q+S+VQA+IVVPTRELG+QVTKVARMLAAK     E+
Sbjct: 118 LHAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAK----SEI 177

Query: 608 GEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLKVLIIDEV 667
             K   VMALLDGG LRRHK+WLKA+PP+ILVATV SLC M+E+    + S++VL++DEV
Sbjct: 178 DVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEV 237

Query: 668 DFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRHFLQECIQQKWTKNNVIHVHI 727
           DF+F SSKQV S++K+LTS+S    RQTVFASASIPQH+HF+ +CIQQKWTK +V+HVH+
Sbjct: 238 DFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHV 297

Query: 728 NAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAGKIPPATL 787
           +A+ PMP CLLHRFVMC+K  KHQ  L +L +D P+SAIIFV EQSE+SKKAG  P  TL
Sbjct: 298 SAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTL 357

Query: 788 MIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGIDLPETTHI 847
           +++FLKTSY G  +++LL+ D+NFNSRAASL+E+RQGG +L+V+TD+ ARGIDLPETTHI
Sbjct: 358 LMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHI 417

Query: 848 YNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVERFVLQKFENELLFTCDELVV 907
           +NFDLPQT  DYLHRAGR GRKPFS+ KC+V NLITS ERFVLQ++ENEL+F+C+E+++
Sbjct: 418 FNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVLQRYENELMFSCEEMML 472

[Close]

BLAST of Csor.00g252750 vs. TAIR 10
Match: AT5G19210.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 448.0 bits (1151), Expect = 1.8e-125
Identity = 212/319 (66.46%), Postives = 267/319 (83.70%), Query Frame = 0


Query: 588 IQVTKVARMLAAKPATADEVGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQ 647
           +QVTKVARMLAAK     E+  K   VMALLDGG LRRHK+WLKA+PP+ILVATV SLC 
Sbjct: 1   MQVTKVARMLAAK----SEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCH 60

Query: 648 MVERRFLDLASLKVLIIDEVDFMFSSSKQVSSLKKILTSYSMFSNRQTVFASASIPQHRH 707
           M+E+    + S++VL++DEVDF+F SSKQV S++K+LTS+S    RQTVFASASIPQH+H
Sbjct: 61  MLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKH 120

Query: 708 FLQECIQQKWTKNNVIHVHINAVQPMPSCLLHRFVMCDKNKKHQTFLRVLLTDKPQSAII 767
           F+ +CIQQKWTK +V+HVH++A+ PMP CLLHRFVMC+K  KHQ  L +L +D P+SAII
Sbjct: 121 FVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAII 180

Query: 768 FVSEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVLLDEDVNFNSRAASLSEVRQGGSY 827
           FV EQSE+SKKAG  P  TL+++FLKTSY G  +++LL+ D+NFNSRAASL+E+RQGG +
Sbjct: 181 FVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGF 240

Query: 828 LIVATDLVARGIDLPETTHIYNFDLPQTAIDYLHRAGRTGRKPFSEDKCMVTNLITSVER 887
           L+V+TD+ ARGIDLPETTHI+NFDLPQT  DYLHRAGR GRKPFS+ KC+V NLITS ER
Sbjct: 241 LLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEER 300

Query: 888 FVLQKFENELLFTCDELVV 907
           FVLQ++ENEL+F+C+E+++
Sbjct: 301 FVLQRYENELMFSCEEMML 315

[Close]

BLAST of Csor.00g252750 vs. TAIR 10
Match: AT3G06060.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 355.9 bits (912), Expect = 9.5e-98
Identity = 185/272 (68.01%), Postives = 230/272 (84.56%), Query Frame = 0


Query: 11  LVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAASEGARVSILAR 70
           L+ ++PL+LL  L LIVRPR +KIP+K+RH FITGGSSGIGLALAH+AASEGARVSILAR
Sbjct: 12  LIPIIPLSLLAILALIVRPRPIKIPIKSRHAFITGGSSGIGLALAHRAASEGARVSILAR 71

Query: 71  SLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQGVFVPQELAE 130
           S  KLEEAK +I+L+TG++VA F+ADVRDYDA+SKA+DE+GPIDVL+VNQGVF  +EL +
Sbjct: 72  SGSKLEEAKKSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFTAKELVK 131

Query: 131 QDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVGVYGYTAYSAS 190
              ++VKF +DVNL+G+F++IKAALP MK R DR PASI+L+SSQAGQVGVYGY AYSAS
Sbjct: 132 HSPEDVKFTIDVNLVGSFNVIKAALPAMKARKDRGPASISLVSSQAGQVGVYGYAAYSAS 191

Query: 191 KFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIAAGGGRMKAEL 250
           KFGL+GLA+ALQQEVI D+IH++LIFPPDT+TPG  EE+K RPE+T IIAA  G M+ E 
Sbjct: 192 KFGLQGLAQALQQEVISDDIHVTLIFPPDTNTPGFEEEQKSRPEVTAIIAASSGSMETEE 251

Query: 251 VAKKALNGIKSGLW--ACVFNGFGMIVFKNGM 281
           VAKKA++GIK+G +  +C F GF + +   GM
Sbjct: 252 VAKKAMDGIKAGNFTVSCNFEGFLLSLATTGM 283

[Close]

BLAST of Csor.00g252750 vs. TAIR 10
Match: AT5G19200.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 344.4 bits (882), Expect = 2.9e-94
Identity = 182/277 (65.70%), Postives = 224/277 (80.87%), Query Frame = 0


Query: 6   YAFISLVVLLPLALLIFLYLIVRPRSVKIPLKNRHVFITGGSSGIGLALAHQAASEGARV 65
           ++     +L  ++LLI L  IVRPRSV IP+K RHVFITGGSSGIGLALAH+A SEGA+V
Sbjct: 5   FSLFLFFILFIVSLLIILSFIVRPRSVTIPIKFRHVFITGGSSGIGLALAHRAVSEGAKV 64

Query: 66  SILARSLKKLEEAKDAIRLSTGIDVAVFAADVRDYDAISKAVDEAGPIDVLVVNQGVFVP 125
           SILARS +KL EAK +I+L+TG++VA F+ADVRDYDA+SKA+DE+GPIDVL+VNQGVF+ 
Sbjct: 65  SILARSTEKLAEAKRSIQLATGVEVATFSADVRDYDAVSKAIDESGPIDVLIVNQGVFIG 124

Query: 126 QELAEQDMDEVKFMLDVNLLGAFHMIKAALPTMKNRVDRRPASIALMSSQAGQVGVYGYT 185
           +EL +Q  +EVKFM+DVNL G+F++IKAALP MK R  R PASI+L+SSQAGQ G+YGYT
Sbjct: 125 KELEKQSPEEVKFMIDVNLTGSFNVIKAALPAMKAREGRGPASISLVSSQAGQAGIYGYT 184

Query: 186 AYSASKFGLRGLAEALQQEVIGDNIHISLIFPPDTDTPGLVEEEKKRPELTNIIAAGGGR 245
           AYSASKFGL+GLA+ALQQEVI D IH++L+FPPDTDTPG  +E KKRPELT+IIAA  G 
Sbjct: 185 AYSASKFGLQGLAQALQQEVISDGIHVTLLFPPDTDTPGFEQELKKRPELTSIIAASSGS 244

Query: 246 MKAELVAKKALNGIKSGLW--ACVFNGFGMIVFKNGM 281
           MK   VAK   +GIK+G +   C F GF + +   GM
Sbjct: 245 MKTNEVAKICFDGIKAGKFTVTCHFIGFLLSIASTGM 281

[Close]

BLAST of Csor.00g252750 vs. TAIR 10
Match: AT1G12770.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 6.9e-32
Identity = 121/453 (26.71%), Postives = 190/453 (41.94%), Query Frame = 0


Query: 500 FEASSLREICNGYVPDHILDRAEEIGFVAPTGVQRQALPVLFSGRDCVLHAQTGSGKTLT 559
           F A S  E+    +PD +LD  E  GF  PT VQ  A+P +  G D V+ + TGSGKTL 
Sbjct: 107 FSAKSFEEL---GLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLA 166

Query: 560 YLLLIFSVI-------------NAQKSAVQALIVVPTRELGIQVTKVARMLAAKPATADE 619
           YLL I S I             N +++ +QA+IV P+RELG+Q+ +    L         
Sbjct: 167 YLLPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGP------ 226

Query: 620 VGEKSYVVMALLDGGLLRRHKTWLKADPPSILVATVGSLCQMVERRFLDLASLKVLIIDE 679
                 +V  L+ G    R +  LK + P+I+V T G + ++ +   L     + L++DE
Sbjct: 227 --VHRRMVQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDE 286

Query: 680 VDFMFSSSKQVSSLKKILTSYSMFS------------NRQTVFASASIPQHRHFLQECIQ 739
           VD + S + +   + +IL      S            NRQT+  SA++P    F      
Sbjct: 287 VDELLSFNFR-EDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVP----FSVIRAA 346

Query: 740 QKWTKNNVIHVHINAVQP------------------------------MPSCLLHRFVMC 799
           + W+   V+ V  N V P                              +P  L H + + 
Sbjct: 347 KSWSHEPVL-VQANKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCIS 406

Query: 800 DKNKKHQTFLRVLLTDKPQSAIIFVSEQSERSKKAGKIPPATLMIDFLKTSYDGCSDVVL 859
               K  T  R +     QS I F++   +      K+    +             +   
Sbjct: 407 KHQHKVDTLRRCVHALDAQSVIAFMNHSRQLKDVVYKLEARGM-------------NSAE 466

Query: 860 LDEDVNFNSRAASLSEVRQGGSYLIVATDLVARGIDLPETTHIYNFDLPQTAIDYLHRAG 898
           +  D+    R+  L + + G   ++V  +L ARG+D+ E   + N +LP  A+ Y HRAG
Sbjct: 467 MHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPTDAVHYAHRAG 526

The following BLAST results are available for this feature:

BLAST of Csor.00g252750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E9C3	1.8e-165	67.06	DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q0JFN7	4.8e-147	59.54	DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. jap...	[more]
Q0WRJ2	1.3e-96	68.01	3-dehydrosphinganine reductase TSC10A OS=Arabidopsis thaliana OX=3702 GN=TSC10A ...	[more]
F4JZN6	4.0e-93	65.70	3-dehydrosphinganine reductase TSC10B OS=Arabidopsis thaliana OX=3702 GN=TSC10B ...	[more]
Q06136	1.2e-36	37.35	3-ketodihydrosphingosine reductase OS=Homo sapiens OX=9606 GN=KDSR PE=1 SV=1	[more]

BLAST of Csor.00g252750 vs. NCBI nr


Match Name	Identity	Description
KAG6597460.1	100.00	DEAD-box ATP-dependent RNA helicase 58, chloroplastic, partial [Cucurbita argyro...	[more]
KAG7028919.1	89.97	DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Cucurbita argyrosperma su...	[more]
XP_023539234.1	96.43	DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Cucurbita pepo subsp. pep...	[more]
XP_022933736.1	97.65	DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Cucurbita moschata]	[more]
XP_022973672.1	94.39	DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Cucurbita maxima]	[more]

BLAST of Csor.00g252750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZV7	0.0	97.65	DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Cucurbita moschata OX=3...	[more]
A0A6J1I860	0.0	94.39	DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Cucurbita maxima OX=366...	[more]
A0A7G2F8P4	1.11e-303	53.98	(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC...	[more]
A0A6J1C9C7	2.43e-274	83.12	DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 OS=Momordica ch...	[more]
A0A1S3AX19	1.97e-273	83.76	DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 OS=Cucumis melo...	[more]

BLAST of Csor.00g252750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19210.2	1.3e-166	67.06	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G19210.1	1.8e-125	66.46	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G06060.1	9.5e-98	68.01	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G19200.1	2.9e-94	65.70	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G12770.1	6.9e-32	26.71	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 40..57 score: 44.59 coord: 111..122 score: 48.82 coord: 187..206 score: 34.62
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 40..230 e-value: 5.6E-45 score: 153.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 525..741 e-value: 1.7E-34 score: 130.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 537..720 score: 19.770424
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 790..870 e-value: 4.2E-12 score: 56.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 750..868 e-value: 7.7E-17 score: 61.6
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 749..906 score: 12.983691
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 531..704 e-value: 1.0E-27 score: 97.1
None	No IPR available	GENE3D	3.40.50.720		coord: 32..278 e-value: 9.8E-57 score: 194.3
None	No IPR available	PIRSR	PIRSR000095-1	PIRSR000095-1	coord: 43..217 e-value: 4.1E-30 score: 102.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..362
None	No IPR available	PANTHER	PTHR47958:SF95	DEAD-BOX ATP-DEPENDENT RNA HELICASE 58, CHLOROPLASTIC	coord: 481..905
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 481..905
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 737..868 e-value: 4.91184E-26 score: 102.2
None	No IPR available	CDD	cd00268	DEADc	coord: 517..726 e-value: 2.16353E-51 score: 176.864
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 481..723 e-value: 4.2E-46 score: 159.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 735..903 e-value: 8.9E-26 score: 92.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 538..874
IPR020904	Short-chain dehydrogenase/reductase, conserved site	PROSITE	PS00061	ADH_SHORT	coord: 174..202
IPR045022	3-ketodihydrosphingosine reductase KDSR-like	CDD	cd08939	KDSR-like_SDR_c	coord: 39..262 e-value: 7.32213E-84 score: 267.197
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 34..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g252750.m01	Csor.00g252750.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006666	3-keto-sphinganine metabolic process
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0030148	sphingolipid biosynthetic process
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0047560	3-dehydrosphinganine reductase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016491	oxidoreductase activity