Csor.00g252580 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g252580
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	AWPM-19-like family protein
Location	Csor_Chr06: 10125083 .. 10126224 (+)
RNA-Seq Expression	Csor.00g252580
Synteny	Csor.00g252580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTCAAGTGCGATCTGCAGTTTCCGTCCTTCTAGTTCTTAATCTCGTACTCTACTTCATCATAACTGTCATTGCTTCGTGGGCGGTAAATCACGCGTTGGAGAAGTCTTTCGAATCAGGTAACTTTCGACTCACGTCTCCAACTTTATCAACCATATACAACAAATCAGAATGTTAGTAGTAAGTTTGGGTCTCTCTAAATGTTCTTTTTGTATGAATTTGTAGCATCGACGTTGACACTGCCAGCCCACTTGTTTCCGATGTACTTCCCCATCGGAAACATGGCGACGGGATTCTTTATTATCTTCTCTTTGATTGCTGGGATTGTTGGAATGGCAACATCAGCCACAGGTATCACCAATGTCTCAAAATGGAATGCCTCAAATGTACACACAGCATCTGCTTCCTCTCTTGCAACTTGGGCAGTCACTGTTCTTGCTATGGGGTAATTTTTATACACTTCTTTTTTCCCTCTCTGTTCTCTTTACAGTAAATCAGTTTTCCAATGGTAATTTGATTATGAACTTCGTATTTAATAATTTACTGTTTTCTTTACTCTGTTTTCCAGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAAATGGAAACTTGGTAAGACAGGCATTGTCTGGAACAGTTCCCACTTTTTAACTTTTTTCTTACTTTCATTCTTGAAGAAGCTTGTTGGGTAATGTTTGTTAAATTCCAATTTCAAGTCTTCAAGCTAGAAGCTTTTCAAGTACACAAGTATCTAGACCCTAAAGAAGGAAGGGTTTTTTAATGACTTGTTTTTCCTTTTTGGTACTTTCTATATCGCTATACGATCTCGTAGTTGCATACGTGGTTCATATACATTATTCTACTTTATCAATCCACGTAAAACGAACTAATAAAACTAGAAATAAAACGACAATTCAAAGGCCAAGACTACTTTATAGAACTAGAAATCACATGGTTCTATATATGGTTGTATGATTGAAAGATTGAAATGTGGAATATTTGTATTTGTACACAGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAATTGTTATGCACAGGCGCTATCCAAGTTGGGGTTGAAGAGATGATTGTTAGTAGCAACCGAATTGGAGGAAGGGTTTGA

mRNA sequence

ATGGCTACTCAAGTGCGATCTGCAGTTTCCGTCCTTCTAGTTCTTAATCTCGTACTCTACTTCATCATAACTGTCATTGCTTCGTGGGCGGTAAATCACGCGTTGGAGAAGTCTTTCGAATCAGCATCGACGTTGACACTGCCAGCCCACTTGTTTCCGATGTACTTCCCCATCGGAAACATGGCGACGGGATTCTTTATTATCTTCTCTTTGATTGCTGGGATTGTTGGAATGGCAACATCAGCCACAGGTATCACCAATGTCTCAAAATGGAATGCCTCAAATGTACACACAGCATCTGCTTCCTCTCTTGCAACTTGGGCAGTCACTGTTCTTGCTATGGGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAAATGGAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAATTGTTATGCACAGGCGCTATCCAAGTTGGGGTTGAAGAGATGATTGTTAGTAGCAACCGAATTGGAGGAAGGGTTTGA

Coding sequence (CDS)

ATGGCTACTCAAGTGCGATCTGCAGTTTCCGTCCTTCTAGTTCTTAATCTCGTACTCTACTTCATCATAACTGTCATTGCTTCGTGGGCGGTAAATCACGCGTTGGAGAAGTCTTTCGAATCAGCATCGACGTTGACACTGCCAGCCCACTTGTTTCCGATGTACTTCCCCATCGGAAACATGGCGACGGGATTCTTTATTATCTTCTCTTTGATTGCTGGGATTGTTGGAATGGCAACATCAGCCACAGGTATCACCAATGTCTCAAAATGGAATGCCTCAAATGTACACACAGCATCTGCTTCCTCTCTTGCAACTTGGGCAGTCACTGTTCTTGCTATGGGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAAATGGAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAATTGTTATGCACAGGCGCTATCCAAGTTGGGGTTGAAGAGATGATTGTTAGTAGCAACCGAATTGGAGGAAGGGTTTGA

Protein sequence

MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGNMATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKEIELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV

Homology

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BLAST of Csor.00g252580 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MA   R+ ++ LLVLNL++Y I+   ASW +NH +                       GN
Sbjct: 1   MAGVGRTMIAPLLVLNLIMYLIVIGFASWNLNHYINGETNHPGV-------------AGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
            AT +F++F+++AG+VG A+   G+ +V  W A ++   +AS+L  WA+T LA G A KE
Sbjct: 61  GATFYFLVFAILAGVVGAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKE 120

Query: 121 IELGWTNG-NLRTLEVMTIITSATQLLCTGAIQVGV 156
           I +G   G  LR LE   II + TQLL    +  G+
Sbjct: 121 IHIGGYRGWRLRVLEAFVIILAFTQLLYVAMLHGGL 143

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BLAST of Csor.00g252580 vs. NCBI nr
Match: KAG6597477.1 (Membrane protein PM19L, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318 bits (814), Expect = 5.23e-109
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN
Sbjct: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE
Sbjct: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV
Sbjct: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169

[Close]

BLAST of Csor.00g252580 vs. NCBI nr
Match: XP_022954260.1 (uncharacterized protein LOC111456543 [Cucurbita moschata])

HSP 1 Score: 316 bits (809), Expect = 3.03e-108
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTL LPAHLFPMYFPIGN
Sbjct: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE
Sbjct: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV
Sbjct: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169

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BLAST of Csor.00g252580 vs. NCBI nr
Match: XP_023522151.1 (membrane protein PM19L-like [Cucurbita pepo subsp. pepo] >XP_023539203.1 membrane protein PM19L-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313 bits (801), Expect = 5.02e-107
Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQV+SAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTAS SSLATWAVTVLAMGFAWKE
Sbjct: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASVSSLATWAVTVLAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWT+GNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV
Sbjct: 121 IELGWTDGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169

[Close]

BLAST of Csor.00g252580 vs. NCBI nr
Match: XP_022973660.1 (uncharacterized protein LOC111472244 [Cucurbita maxima])

HSP 1 Score: 308 bits (789), Expect = 3.39e-105
Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN
Sbjct: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTAS SSLATWAVTVLAMGFAWKE
Sbjct: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASVSSLATWAVTVLAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIV S +I GRV
Sbjct: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVRSKQIAGRV 169

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BLAST of Csor.00g252580 vs. NCBI nr
Match: XP_038905167.1 (membrane protein PM19L [Benincasa hispida])

HSP 1 Score: 293 bits (751), Expect = 2.11e-99
Identity = 152/169 (89.94%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQV+SAVSVLLVLNLVLYFIITVIASWAVNHALE+SFESASTLTLPA LFP+YFPIGN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEQSFESASTLTLPARLFPIYFPIGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFF+IFSLIAG+VGMA+SATGITNV+KWNASNVHTAS SSLAT+AVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMASSATGITNVTKWNASNVHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWTN NLRTLEVMTIITSATQLLCTGA+Q+GVEEMIVS+NR+ GRV
Sbjct: 121 IELGWTNSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVSNNRLAGRV 169

[Close]

BLAST of Csor.00g252580 vs. ExPASy TrEMBL
Match: A0A6J1GRY9 (uncharacterized protein LOC111456543 OS=Cucurbita moschata OX=3662 GN=LOC111456543 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 1.47e-108
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTL LPAHLFPMYFPIGN
Sbjct: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE
Sbjct: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV
Sbjct: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169

[Close]

BLAST of Csor.00g252580 vs. ExPASy TrEMBL
Match: A0A6J1IBX6 (uncharacterized protein LOC111472244 OS=Cucurbita maxima OX=3661 GN=LOC111472244 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 1.64e-105
Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN
Sbjct: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTAS SSLATWAVTVLAMGFAWKE
Sbjct: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASVSSLATWAVTVLAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIV S +I GRV
Sbjct: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVRSKQIAGRV 169

[Close]

BLAST of Csor.00g252580 vs. ExPASy TrEMBL
Match: A0A1S3AXU3 (uncharacterized protein LOC103483760 OS=Cucumis melo OX=3656 GN=LOC103483760 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 4.64e-96
Identity = 146/169 (86.39%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQV+SAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPA LFP+YFP GN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFF+IFSLIAG+VGMA+SATGITNV+KWN+SN+HTAS SSLAT+AVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMASSATGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWT+ NLRTLEV+TIITSATQLLCTGA+Q+GVEEMIV+  R+ GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 169

[Close]

BLAST of Csor.00g252580 vs. ExPASy TrEMBL
Match: A0A0A0L8V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150170 PE=4 SV=1)

HSP 1 Score: 281 bits (718), Expect = 1.09e-94
Identity = 142/169 (84.02%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MATQ +SAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPA LFP+YFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFF+IFSLIAG++GMA+SATGITNV+KW++SN+HTAS SSLAT+AVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           IELGWT+ NLRTLEV+TIITSATQLLCTGA+Q+GVEEM+V+  ++GGRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of Csor.00g252580 vs. ExPASy TrEMBL
Match: A0A6J1CC84 (uncharacterized protein LOC111009393 OS=Momordica charantia OX=3673 GN=LOC111009393 PE=4 SV=1)

HSP 1 Score: 280 bits (717), Expect = 1.55e-94
Identity = 144/169 (85.21%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGN 60
           MA+Q RSAVSVLLVLNLVLYFIITV+ASW VNHA+EKSF +ASTL+ PAHLFP+YFP+GN
Sbjct: 1   MASQARSAVSVLLVLNLVLYFIITVMASWTVNHAMEKSFXTASTLSPPAHLFPIYFPVGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFF+IFSLIAG+VGMATSATGITNVSKWNAS++HTAS SSLATWAVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMATSATGITNVSKWNASDLHTASVSSLATWAVTILAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169
           +ELGWT  NLRTLEVMTIITSATQLLCTGAIQVGVEEMI   NR+ GRV
Sbjct: 121 MELGWTTSNLRTLEVMTIITSATQLLCTGAIQVGVEEMIFYGNRLEGRV 169

[Close]

BLAST of Csor.00g252580 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-55
Identity = 107/159 (67.30%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 6   RSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGNMATGF 65
           +SA  +LL+LNL LYF+IT+IASWAVNH +E++ ESASTL+LPA +FP+YFP+GNMATGF
Sbjct: 7   KSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVGNMATGF 66

Query: 66  FIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKEIELGW 125
           F+IF+LIAG+VGMATS TGI NV +W++ N+H+A+ASSL +W++T+LAMG A KEI +GW
Sbjct: 67  FVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACKEINIGW 126

Query: 126 TNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNR 165
           T  NLRTLEV+TII SATQLLCTGAI  GV E + S  R
Sbjct: 127 TEANLRTLEVLTIIVSATQLLCTGAIHAGVGETVASGER 165

[Close]

BLAST of Csor.00g252580 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-33
Identity = 70/148 (47.30%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 4   QVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGNMAT 63
           Q++   S LLVLN  +Y I+  I  WA+N A++  FE    L LPAH  P+YFP+GN AT
Sbjct: 5   QIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMGNAAT 64

Query: 64  GFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKEIEL 123
           GFF+IF+L+AG+VG A++ +G++++  W   ++  A+ ++   W +TVLAMGFAWKEIEL
Sbjct: 65  GFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWKEIEL 124

Query: 124 GWTNGNLRTLEVMTIITSATQLLCTGAI 152
              N  LRT+E   II S TQL+   A+
Sbjct: 125 QGRNAKLRTMEAFLIILSVTQLIYIAAV 152

[Close]

BLAST of Csor.00g252580 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 127.9 bits (320), Expect = 7.9e-30
Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 4   QVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIGNMAT 63
           Q++   S LLVLN  +Y I+  I +W++N A+   F   +  +LPAH  P++FP+GN AT
Sbjct: 5   QMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAAT 64

Query: 64  GFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKEIEL 123
           GFFI+F+LIAG+ G A+  +GI+++  W  +++  A +++   W++T+LAMGF  KEIEL
Sbjct: 65  GFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIEL 124

Query: 124 GWTNGNLRTLEVMTIITSATQLLCTGAI 152
           G  N  LRT+E   II SATQLL   AI
Sbjct: 125 GMRNARLRTMEAFLIILSATQLLYIAAI 152

[Close]

BLAST of Csor.00g252580 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-16
Identity = 58/156 (37.18%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 1   MATQV-RSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPAHLFPMYFPIG 60
           MAT V R+  + LL LNLV+Y I+   ASW +N  +       S               G
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSF-------------GG 60

Query: 61  NMATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWK 120
           N AT FF+ FS++A +VG+A+   G  ++  W   ++  A ASS+  WA+T LAMG A K
Sbjct: 61  NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 120

Query: 121 EIEL-GWTNGNLRTLEVMTIITSATQLLCTGAIQVG 155
           +I + GW    L+ +E   II + TQLL    I  G
Sbjct: 121 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAG 143

The following BLAST results are available for this feature:

BLAST of Csor.00g252580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	1.3e-16	36.54	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of Csor.00g252580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597477.1	5.23e-109	100.00	Membrane protein PM19L, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954260.1	3.03e-108	99.41	uncharacterized protein LOC111456543 [Cucurbita moschata]	[more]
XP_023522151.1	5.02e-107	98.22	membrane protein PM19L-like [Cucurbita pepo subsp. pepo] >XP_023539203.1 membran...	[more]
XP_022973660.1	3.39e-105	97.04	uncharacterized protein LOC111472244 [Cucurbita maxima]	[more]
XP_038905167.1	2.11e-99	89.94	membrane protein PM19L [Benincasa hispida]	[more]

BLAST of Csor.00g252580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRY9	1.47e-108	99.41	uncharacterized protein LOC111456543 OS=Cucurbita moschata OX=3662 GN=LOC1114565...	[more]
A0A6J1IBX6	1.64e-105	97.04	uncharacterized protein LOC111472244 OS=Cucurbita maxima OX=3661 GN=LOC111472244...	[more]
A0A1S3AXU3	4.64e-96	86.39	uncharacterized protein LOC103483760 OS=Cucumis melo OX=3656 GN=LOC103483760 PE=...	[more]
A0A0A0L8V6	1.09e-94	84.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150170 PE=4 SV=1	[more]
A0A6J1CC84	1.55e-94	85.21	uncharacterized protein LOC111009393 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of Csor.00g252580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18970.1	1.9e-55	67.30	AWPM-19-like family protein	[more]
AT1G29520.1	2.0e-33	47.30	AWPM-19-like family protein	[more]
AT5G46530.1	7.9e-30	45.95	AWPM-19-like family protein	[more]
AT1G04560.1	8.4e-16	37.18	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 14..154 e-value: 4.7E-53 score: 179.2
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 3..168
None	No IPR available	PANTHER	PTHR33294:SF3	AWPM-19-LIKE FAMILY PROTEIN	coord: 3..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g252580.m01	Csor.00g252580.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006542	glutamine biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004356	glutamate-ammonia ligase activity