Csor.00g250750 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g250750
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	nuclear transport factor 2B
Location	Csor_Chr06: 11143693 .. 11147049 (-)
RNA-Seq Expression	Csor.00g250750
Synteny	Csor.00g250750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGATTTCTCGAGCTTCCGAGCCCACCGGAATCCATGGAAGTCATTTCCGGGAGGCGGGCATCTCCGGTGGGTTTCCGTTGTTTCCCGACGTGTCGGGGAGCTACATGTCTGTGGGTACGAGGAGTAGTATGAAGGAAGATATGGTTTCGGTTAGTAAAGGGTCAGCGGTGGAGGTGGTGGAGGGAGGAGCGGAGACGACGGAGATGGCGGCGGCGAGACAGGGAGATAATGATAAGAAAAAGAAGACGAGAAGCCGGAGATTTGCTTTTCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGATATCGATGGAGAAAGTATGGACAGAAGGGTGTGAAGAACAACAAATTCCCAAGGTAACCTAATTAGTCAATAATTATTTCTTAGCATTAAAATCAACGCCTTAAAAGTCAAATTTTATAGTTAAGTATTGAATAATACCTCCAATTATGAGTAGAAATGTCTTTTAGAACCGTCACAAATCATATAAACATTAAAAGAAAGAGTCGAGAGAGATTTCTCTCCATTAGCTAAATAAGATTGGGTACAGGGATTATATTTCCCGTCTCTGACTCTTACTACACTGCACTCTAATAGAGAAAAACAACCCGATTCTTGAAAAATTCTCGTCTCGATCCCTGTAAGAATAAATGAAAAATTCTGTGTGAATAGAGAATGAAATAGGAGGCGGAGACGGGGAACCCTTAGCACACTGCACCCTAATAGAGAAAAACAACCCAATTCTCGGAAAATTCTTGTTGGATCCCTGTAAGAATAAATGAAAATTTTTGTGAGAATAGAGAATGAAATAGGAGGCGAGAACGAGAATGAGAACAGAGAAAACTTTTGTATTTCGATCGTGTGTACTGAATTATGAATTATTTGTTTGGTATTATATGTTGTAAGAAAAGGCTTGGTTAATGAATTGCAGAAGCTACTATAAATGCACACACCAAGGGTGCAAGGTGAAGAAGCAAGTGCAAAGGCTAACAAGAGATGAAGGAGTGGTGGTGACAACTTACGAAGGCATTCACTCTCATCCCATTCAGAAATCCACAGATAACTTCGAGCATATTTTGACCCAGATGCAAATTTACACTTCTTATTGATTATTTTACAAATATTTACTCGTCTAAAATTTATTACATTTTTTCTATACATATAAACAACTATTTATTTTAGGATGTTTATTGAAATTTTGTTCGAGAAATTAAAAAAAAAATAAACGATAAATAATTCATAATTAATGTATTATTTATATTTATATTTATTTTATTTATAACAATGTATTATTCGTTACATAAAATTTTAAAATAATAAATAATATACGATAAAGTTGGATTACTTGTTTTTGTAGTCCTAGTTTTTTACGAGAGGATGATGTTATAATCGATGCAATCAAGAACGGATCGTCGTTGTGCCGTACATTTGAGTAACTACATGCAATTATAGAAAATTGTGTCAGTCAATTTTTATAGGTCTAAGTCTTTGTTCATCGTATGAGGTTGGGTGTTAGAGTCAAACATAATAAATTAGATTTAGATGTCGGGCAATCGAGATTGAATAAGATCGAAATTGAGTAGTGCCACTTGCATGAGCAAGGTGTTGTCTAGGGTTCATATGGATGTGGGTTACATTCATGAGTTGAAATTCTTTGATCGTGTCGATTGCAGAGTTAAAAAATAAAAAAATAAAATTCTATGGAATTTAAATATATTCATTTTGATTTTATATTATTTTTATAATATTTAAAAATTTTGAAACTAAATAATTATAAAATATAAAAACTAAACTGTTACACTTCCATTAAAATCTTAAAACGCAATTTTAGGACTCAAAAAAATTTAAACCTAAATTTATTATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACGAACCGGACTCGTCAGCGGCAATCTTCAACTCGCTGGAGAACAACATGCTCTCAAATTCAGTCAGGTAATGTGTTTTCTTATTGAAGATATTGCTTGATTTGTTGCGGTTTTGTGAGCCTTGTGGCTATTGATGTTGTATTTATGGATTGATCTCGGTTGGATCTTGTGTTCTCTTGGAGTTAGCCGATCGATCCTTATTATAGAGTTTCCTTGACTGAATTGATGTTGTGTTTCTCTAATTTATGCGTTTGTGCTCTTGAAGTATCATTAGGTTTTGGGTAATTTGCGTCGTATTTGTTCATCATGTAGATCTAGGGGTTTTCGTTAGGATTTTTTGTATCATATTTGGATAACGGTACTGTAGATCAAGCTTGAGACCGTGATATGCTTGTTTGCTACTTTTTATTGTATTTGGTATTTGGCGGGTTCGGCACGTCTGAGATGGTTCATGTTTTACCGTTGGGTTCTTAGGTTTTTTAGAAGAAATCTTGTGGATTAAGTTCATTTGACCATCTTGCTGATTTATCAGCATGGGCCTAGTTAGAAAAAAAGGCACTTGATTATTTAACTCTGAAAAGTTAGTGCTAAACTTGTCCTTAATGGATGCTGCTTTTATCCTTGGGAATTTGTGAGGCGACTAAGAAAGTTCCCCTGCTGTTATGTTTGAATAAAAACGTTGCCTCGTCCCATGTCTTTCTTCTAGTATCTATGCATGTTATGACTTCTCTAGCTTATCATGATGACATCTTTGAGAGAAAGTAATGACGCATTGAATCTGTGATCATGATCTATATTCTCCTTGACTATTTGGTGGTACTTTTAGGTATAAATTCACGTGGGAATGCAAGAACATGTATTTACTCGTTCTTCATTTACCTTTTCTAATTCAATATATGTCCAAATTGCTTATGGAATGGAATTTGTTTTAGAATGATGAATCATGAAAGCATTGTTAAAACAAATTATGGAATGATGGTATTTATGACGGTATATTTTATAGTCTGTGAATAACAATATTAGTGAATATGTATTGTGTGTAACATAATGAAATAGAACACACTGATGAATAGGTATTACTTTCTTGTTTATCTCATTATGAAACAAATTCAATTATGTCGAGAACTTCTGGGAAGAAAGAATTTAGAATTTGTTAATATATGTGCAAGATTGGAAAAGAAGGCACAGTTTTTAATAGGCAACTACAGGATATGAACTTATGGCTGAACGATATGAACAATTCTCTTTTTTGTTGTTAGCTGTGAATCCATGTTCTTCGTAGGATTTGGTTAGGTTGTTCAACTCTGTCCTTGAGTTTTAAAGGGCTTAAATTGCTTAGTAAATATTTCTAACCAAAATGTATTTACTTTGTGCTTTTAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTATGTGCTGAATGACATTTTCCGATTGAACTATGCCTGA

mRNA sequence

ATGCTGATTTCTCGAGCTTCCGAGCCCACCGGAATCCATGGAAGTCATTTCCGGGAGGCGGGCATCTCCGGTGGGTTTCCGTTGTTTCCCGACGTGTCGGGGAGCTACATGTCTGTGGGTACGAGGAGTAGTATGAAGGAAGATATGGTTTCGGTTAGTAAAGGGTCAGCGGTGGAGGTGGTGGAGGGAGGAGCGGAGACGACGGAGATGGCGGCGGCGAGACAGGGAGATAATGATAAGAAAAAGAAGACGAGAAGCCGGAGATTTGCTTTTCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGATATCGATGGAGAAAGTATGGACAGAAGGGTGTGAAGAACAACAAATTCCCAAGCGGCAATCTTCAACTCGCTGGAGAACAACATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTATGTGCTGAATGACATTTTCCGATTGAACTATGCCTGA

Coding sequence (CDS)

ATGCTGATTTCTCGAGCTTCCGAGCCCACCGGAATCCATGGAAGTCATTTCCGGGAGGCGGGCATCTCCGGTGGGTTTCCGTTGTTTCCCGACGTGTCGGGGAGCTACATGTCTGTGGGTACGAGGAGTAGTATGAAGGAAGATATGGTTTCGGTTAGTAAAGGGTCAGCGGTGGAGGTGGTGGAGGGAGGAGCGGAGACGACGGAGATGGCGGCGGCGAGACAGGGAGATAATGATAAGAAAAAGAAGACGAGAAGCCGGAGATTTGCTTTTCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGATATCGATGGAGAAAGTATGGACAGAAGGGTGTGAAGAACAACAAATTCCCAAGCGGCAATCTTCAACTCGCTGGAGAACAACATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTATGTGCTGAATGACATTTTCCGATTGAACTATGCCTGA

Protein sequence

MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEVVEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFPSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA

Homology

[Close]

BLAST of Csor.00g250750 vs. ExPASy Swiss-Prot
Match: Q9C7F5 (Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0


Query: 119 FPSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 162
           F SGNLQLAGE+HALKFSQMFHLMPTPQGSFYV NDIFRLNYA
Sbjct: 84  FVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRLNYA 126

[Close]

BLAST of Csor.00g250750 vs. ExPASy Swiss-Prot
Match: Q9FYA2 (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 0


Query: 44  SMKEDMVSVSKGSAVEVVEGGAETTEMAA--ARQGDNDKKKKTRSRRFAFQTRSQVDILD 103
           S+    +S+   S  E+ +G  E++++ +    +     KKK + +R+AFQTRSQVDILD
Sbjct: 8   SLYAPFLSLKSHSKPELHQGEEESSKVRSEGCSKSVESSKKKGKKQRYAFQTRSQVDILD 67

Query: 104 DGYRWRKYGQKGVKNNKFP 121
           DGYRWRKYGQK VKNNKFP
Sbjct: 68  DGYRWRKYGQKAVKNNKFP 86

[Close]

BLAST of Csor.00g250750 vs. ExPASy Swiss-Prot
Match: Q9S763 (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana OX=3702 GN=WRKY45 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-12
Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           V+  A+ T  ++  +  + KKKK R  R+AFQTRSQVDILDDGYRWRKYGQK VKNN FP
Sbjct: 26  VDNSAQPT-TSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFP 84

[Close]

BLAST of Csor.00g250750 vs. ExPASy Swiss-Prot
Match: Q9FZK4 (Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.9e-12
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 119 FPSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 162
           F SGNLQLAGEQHALKFSQMFHL+ + QG++YV NDIFRLNYA
Sbjct: 81  FVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRLNYA 122

[Close]

BLAST of Csor.00g250750 vs. ExPASy Swiss-Prot
Match: Q8GY11 (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 77  DNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 121
           D+ + KK ++ RF+F+T+S  DILDDGYRWRKYGQK VKN+ +P
Sbjct: 6   DSSRDKKMKNPRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYP 49

[Close]

BLAST of Csor.00g250750 vs. NCBI nr
Match: KAG6597659.1 (Nuclear transport factor 2B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320 bits (821), Expect = 2.45e-110
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60
           MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV
Sbjct: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60

Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP
Sbjct: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120

Query: 121 SGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 161
           SGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA
Sbjct: 121 SGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 161

[Close]

BLAST of Csor.00g250750 vs. NCBI nr
Match: KAG7029102.1 (putative WRKY transcription factor 75, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237 bits (605), Expect = 3.75e-77
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60
           MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV
Sbjct: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60

Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP
Sbjct: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120

[Close]

BLAST of Csor.00g250750 vs. NCBI nr
Match: XP_022932710.1 (probable WRKY transcription factor 75 [Cucurbita moschata])

HSP 1 Score: 236 bits (601), Expect = 3.17e-76
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60
           MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV
Sbjct: 23  MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 82

Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           VEGGAETTEM AARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP
Sbjct: 83  VEGGAETTEMTAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 142

[Close]

BLAST of Csor.00g250750 vs. NCBI nr
Match: XP_023539085.1 (probable WRKY transcription factor 12 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228 bits (581), Expect = 2.28e-73
Identity = 116/120 (96.67%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60
           MLISRASEPTGIHGS FREA ISGGFPLFPDVSGSYMSVGTRSS KEDMVSVSKGSAVEV
Sbjct: 23  MLISRASEPTGIHGSQFREAAISGGFPLFPDVSGSYMSVGTRSSTKEDMVSVSKGSAVEV 82

Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           VEGGAETTEM AARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP
Sbjct: 83  VEGGAETTEMTAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 142

[Close]

BLAST of Csor.00g250750 vs. NCBI nr
Match: XP_023539084.1 (probable WRKY transcription factor 75 isoform X1 [Cucurbita pepo subsp. pepo] >AXF54192.1 WRKY1 [Cucurbita pepo])

HSP 1 Score: 228 bits (581), Expect = 3.49e-73
Identity = 116/120 (96.67%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60
           MLISRASEPTGIHGS FREA ISGGFPLFPDVSGSYMSVGTRSS KEDMVSVSKGSAVEV
Sbjct: 23  MLISRASEPTGIHGSQFREAAISGGFPLFPDVSGSYMSVGTRSSTKEDMVSVSKGSAVEV 82

Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           VEGGAETTEM AARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP
Sbjct: 83  VEGGAETTEMTAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 142

[Close]

BLAST of Csor.00g250750 vs. ExPASy TrEMBL
Match: A0A6J1F2W9 (probable WRKY transcription factor 75 OS=Cucurbita moschata OX=3662 GN=LOC111439177 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 1.53e-76
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60
           MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV
Sbjct: 23  MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 82

Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           VEGGAETTEM AARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP
Sbjct: 83  VEGGAETTEMTAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 142

[Close]

BLAST of Csor.00g250750 vs. ExPASy TrEMBL
Match: A0A345BTD5 (WRKY1 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 228 bits (581), Expect = 1.69e-73
Identity = 116/120 (96.67%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKGSAVEV 60
           MLISRASEPTGIHGS FREA ISGGFPLFPDVSGSYMSVGTRSS KEDMVSVSKGSAVEV
Sbjct: 23  MLISRASEPTGIHGSQFREAAISGGFPLFPDVSGSYMSVGTRSSTKEDMVSVSKGSAVEV 82

Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           VEGGAETTEM AARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP
Sbjct: 83  VEGGAETTEMTAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 142

[Close]

BLAST of Csor.00g250750 vs. ExPASy TrEMBL
Match: A0A6J1I419 (probable WRKY transcription factor 75 OS=Cucurbita maxima OX=3661 GN=LOC111470780 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 1.54e-70
Identity = 116/124 (93.55%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 2   LISRASEPTGIHGSHFREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSKG-----S 61
           LISRASEPTGIHGSHFREAGISGGFPLFPDVS SYMSV TRSSMKEDMVSVSKG     S
Sbjct: 24  LISRASEPTGIHGSHFREAGISGGFPLFPDVSRSYMSVDTRSSMKEDMVSVSKGFHADGS 83

Query: 62  AVEVVEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKN 120
           A EVVEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKN
Sbjct: 84  AGEVVEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKN 143

[Close]

BLAST of Csor.00g250750 vs. ExPASy TrEMBL
Match: A0A6J1CVL3 (probable WRKY transcription factor 75 OS=Momordica charantia OX=3673 GN=LOC111014691 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 2.09e-30
Identity = 74/134 (55.22%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSH-FREAGISGGFPLFPDVSGSYMSVGTRSSMKEDMVSVSK----- 60
           MLISRA E  GIHG+   +    SGGFP+F DVS   MSV    SMK+D+VS+S+     
Sbjct: 16  MLISRAPELAGIHGAGPLQRPHASGGFPVFRDVSIDDMSVDGVRSMKDDVVSLSRSVRFV 75

Query: 61  -GSAVEVVE-------GGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRW 120
            GSA E VE       G   +T       G  D +KK R +R+AFQTRSQVDILDDGYRW
Sbjct: 76  DGSAGEGVEELEKKAAGAGTSTRTTGPEAGRGDFEKKKRRQRYAFQTRSQVDILDDGYRW 135

[Close]

BLAST of Csor.00g250750 vs. ExPASy TrEMBL
Match: A0A5D3D1A5 (Putative WRKY transcription factor 48 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001590 PE=4 SV=1)

HSP 1 Score: 105 bits (261), Expect = 6.78e-25
Identity = 73/141 (51.77%), Postives = 84/141 (59.57%), Query Frame = 0


Query: 1   MLISRASEPTGIHGSHFREAGISGGFP-LFPDVSGSYMSVGTRSSMKED----------- 60
           +L SRAS+  G H  H     +S GFP LF DVS   MS    SS+K++           
Sbjct: 23  ILFSRASDHRGHHFRH--PPSVSDGFPMLFRDVSTDDMSFDATSSVKDEDNNNNNNNNNV 82

Query: 61  MVSVSK------GSAVEVVEGGAETTEMAAARQ---GDNDKKKKTRSRRFAFQTRSQVDI 120
           +VSVS+       SA++  E   E    A   +   GD DKKKK RSRRFAFQTRSQVDI
Sbjct: 83  VVSVSERFRVDGSSALKKAEEEGEVRAGAMMGERGGGDCDKKKKMRSRRFAFQTRSQVDI 142

[Close]

BLAST of Csor.00g250750 vs. TAIR 10
Match: AT1G27970.1 (nuclear transport factor 2B )

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-17
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0


Query: 119 FPSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 162
           F SGNLQLAGE+HALKFSQMFHLMPTPQGSFYV NDIFRLNYA
Sbjct: 84  FVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRLNYA 126

[Close]

BLAST of Csor.00g250750 vs. TAIR 10
Match: AT1G27970.2 (nuclear transport factor 2B )

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-14
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 119 FPSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIF 157
           F SGNLQLAGE+HALKFSQMFHLMPTPQGSFYV NDIF
Sbjct: 84  FVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIF 121

[Close]

BLAST of Csor.00g250750 vs. TAIR 10
Match: AT5G13080.1 (WRKY DNA-binding protein 75 )

HSP 1 Score: 74.7 bits (182), Expect = 7.5e-14
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 0


Query: 44  SMKEDMVSVSKGSAVEVVEGGAETTEMAA--ARQGDNDKKKKTRSRRFAFQTRSQVDILD 103
           S+    +S+   S  E+ +G  E++++ +    +     KKK + +R+AFQTRSQVDILD
Sbjct: 8   SLYAPFLSLKSHSKPELHQGEEESSKVRSEGCSKSVESSKKKGKKQRYAFQTRSQVDILD 67

Query: 104 DGYRWRKYGQKGVKNNKFP 121
           DGYRWRKYGQK VKNNKFP
Sbjct: 68  DGYRWRKYGQKAVKNNKFP 86

[Close]

BLAST of Csor.00g250750 vs. TAIR 10
Match: AT3G01970.1 (WRKY DNA-binding protein 45 )

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 0


Query: 61  VEGGAETTEMAAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 120
           V+  A+ T  ++  +  + KKKK R  R+AFQTRSQVDILDDGYRWRKYGQK VKNN FP
Sbjct: 26  VDNSAQPT-TSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFP 84

[Close]

BLAST of Csor.00g250750 vs. TAIR 10
Match: AT1G27310.1 (nuclear transport factor 2A )

HSP 1 Score: 72.0 bits (175), Expect = 4.9e-13
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 119 FPSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 162
           F SGNLQLAGEQHALKFSQMFHL+ + QG++YV NDIFRLNYA
Sbjct: 81  FVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRLNYA 122

The following BLAST results are available for this feature:

BLAST of Csor.00g250750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7F5	2.1e-16	93.02	Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1	[more]
Q9FYA2	1.1e-12	50.63	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana OX=3702 GN=WRKY75 ...	[more]
Q9S763	1.8e-12	63.33	Probable WRKY transcription factor 45 OS=Arabidopsis thaliana OX=3702 GN=WRKY45 ...	[more]
Q9FZK4	6.9e-12	81.40	Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1	[more]
Q8GY11	1.9e-09	61.36	Probable WRKY transcription factor 43 OS=Arabidopsis thaliana OX=3702 GN=WRKY43 ...	[more]

BLAST of Csor.00g250750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597659.1	2.45e-110	100.00	Nuclear transport factor 2B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7029102.1	3.75e-77	100.00	putative WRKY transcription factor 75, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022932710.1	3.17e-76	99.17	probable WRKY transcription factor 75 [Cucurbita moschata]	[more]
XP_023539085.1	2.28e-73	96.67	probable WRKY transcription factor 12 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023539084.1	3.49e-73	96.67	probable WRKY transcription factor 75 isoform X1 [Cucurbita pepo subsp. pepo] >A...	[more]

BLAST of Csor.00g250750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2W9	1.53e-76	99.17	probable WRKY transcription factor 75 OS=Cucurbita moschata OX=3662 GN=LOC111439...	[more]
A0A345BTD5	1.69e-73	96.67	WRKY1 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A6J1I419	1.54e-70	93.55	probable WRKY transcription factor 75 OS=Cucurbita maxima OX=3661 GN=LOC11147078...	[more]
A0A6J1CVL3	2.09e-30	55.22	probable WRKY transcription factor 75 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A5D3D1A5	6.78e-25	51.77	Putative WRKY transcription factor 48 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Csor.00g250750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27970.1	1.5e-17	93.02	nuclear transport factor 2B	[more]
AT1G27970.2	2.0e-14	92.11	nuclear transport factor 2B	[more]
AT5G13080.1	7.5e-14	50.63	WRKY DNA-binding protein 75	[more]
AT3G01970.1	1.3e-13	63.33	WRKY DNA-binding protein 45	[more]
AT1G27310.1	4.9e-13	81.40	nuclear transport factor 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 100..142 e-value: 4.3E-4 score: 10.5
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 101..121 e-value: 1.5E-6 score: 28.3
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 95..122 score: 12.116754
IPR002075	Nuclear transport factor 2	PFAM	PF02136	NTF2	coord: 121..158 e-value: 1.7E-7 score: 31.8
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 87..134 e-value: 8.1E-14 score: 53.1
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 92..121
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31221	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 57..120
None	No IPR available	PANTHER	PTHR31221:SF83	WRKY TRANSCRIPTION FACTOR 75-RELATED	coord: 57..120
IPR018222	Nuclear transport factor 2, eukaryote	PROSITE	PS50177	NTF2_DOMAIN	coord: 121..158 score: 11.388361
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 122..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g250750.m01	Csor.00g250750.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0044613	nuclear pore central transport channel
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding