Csor.00g250630 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g250630
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor bHLH153-like isoform X1
Location	Csor_Chr06: 11201555 .. 11204750 (-)
RNA-Seq Expression	Csor.00g250630
Synteny	Csor.00g250630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTAAGTTCCCGGTGTGTGTTTCGTTGATCTCTCATTCTATTTACTGTTATTGTTCTTCCTTTTTTTTCAGGCTGCTTCTTGAACTGTGATAGATTACTGTGTTTTGTCATCTCGTTCACGAGTAGTCAATACTTGCACCAACTTTTGTTTTTATCTTCTTTTTATCGGTTTCCATGCTAAACTGTGTAAGATTGTACTATTGATTAGTTGATTTTTGTTAATTGTGTTATTAGTTACACTGTTTATCTTAATCTGGTTATGGTATTTGGTTTTCTGCCTTTGATTGGTGTGTTCAAGATATTAAAAGGAAGGGGTAGGATAATTCTGTGCGCAAATTACATATTCTCTTAGTTTAATCCCTGCGCGGTGTGGATTTGTTTATCTGTATTTGTTTTAAAATAGAAAAAAAAAAAAAAATTGTTCATCTGGGCCCACCCTGTCTCATTTATAACATCTGTTTGGTTTAAAATACTCATTCTGGATTCCCATTACCCAACCCATTACTTCTACCTTTCTCAAAAAGTAAAAAACTTACAGGTGTTCTCCTGTTTCTTATTCCAGTGTCTCGTAGTTGCAACTTTGTGTGTGTGTGTTCATCTCCAGAGTTGCCTTTTGCGATGTTAGGTTCACTGTATTACCCTTTCTACTGACCGAAACAGCCAAATTTTGATATAAAGACACAGCTCTTAACTGTTTTTTGGTCAAGATGGTCAGTGTGAGAAGGAACATCCAGATCGTTTTAATTTGGGCATGAATTGATGAGAGATGTTTGTATTTGTTTTTTTTGTGCATGTATATTGCTGTCATCGTTATTAACCTATTAATCTCAATATAGTAGCCCTCTGACCCTACTCTTTTCATATTTTTATTCTTAATTGTGCTGATTGTTTTCGGTAATATATATTGGTGTTCGTCATTGGACTATGGAACTTCTGTCTACTTGTATTCCTTTTGTCCTCTAGTAGTTTGTATTATTATATAGTGGTTGTTAATATAGTAGATCAAATAGATCAATATTATATTATTAATAATTTAATCATCTAATGTGGTATGCTTATCTGCATGCTATCTGAAGTTCTGTACCAAAGTAATGATGTTTTGTCTGATCTATGAGGATGCTATTATTTCAAGGCATTTAATTAAAGATTATGAAGTTCGTGGGGTCGTTATTTCTTGGTCGTAGAATGCATTTGGTTTTAAAAGTCAAACAATTTGTGTTCATGTGTATTCACATGAACACAGGCATTTAAAAATATGCCTGTCTTGAACCCGTGGGAGATCTGTATACTTTCAGATTTTCTTAGTTGACTTTCGTTGTTGTATGAGTTTTTTTTATCGATCGAATTTCTTATTACTATATCTTTGCGAGTTCTTCCTCTAAATAAAGTTACTCTATTACATGAAATATAGGATTTTGACGCTTGCATTGGATGTTTGTTGCCTATCTGCTGTGCATCTTGATTGATTGAATTTGATCTCTGTCCAGGCAGAAGTGGTGGAGGTAGAAACAATGATGGAACAGAAAAGGAACCTATGCTCTGTTGATGAGAGCAGCCTCACTTCTCTTACATCCAAGCGTCGCAAGGCAGATTTTTCTATCTCCTCTAAGGTTTCTGTTATTGGTCCAACTTCACATTGCAGCATATTGAAGATTAAGATCTCTATCATATTAATAACTAATCATGCTTAGTAATATATAAAGTTTAAGTTTTGGGTCGTCCATTAGACAAGATTTGGTGGCCTTCTTATCTCATTTTGGGTGGTCCAATTGTATTTCTTTACTTTCCACTTGATTAATCCTCATTTCGTCCTGTTTTGTTCTTTACCAAGTACTAATATTCTCTTTCTATAGGAAAAGAAAGACAAACTGGGCGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATTCGGAAAGGTCTGTTTGGAACAAATCAAATAACCATAAAAATTGACCTTTTATATTGAAACTTCAGGGTTCATATGACCTGGGCCAAATTTGATTTTGGCTCTTGAATTCCATAACCTATGTTTTGCGATTTTGCTATTAGTATTAAAATCATTGCCCTGTTTGAATTCAAGTTATAAAATTCCACTGCAGACAGATACGGCATCTGTTCTTCTTGAGGCCATGGAATATATTCAATTCCTTCACGAGCAAGTCAAGGTATGCTCTTCCCTAAAGATTGTGGTTCCTTTTGAATTCTGATTTCGGTACCGAATACGAGTGGCTATCATGCCATGCATATAGCTTTTCTGTGACCTGTATTATACTTCTTTCCTCCATGAATCCTTCTAATTGGTGGTTCAGGGAATATATTTCCTTTTCACATCCATATTTTTCCTGACCTTTAGTGCTCTGAGCATCAATTAGTGGTTATAAATTCATTTGATATTTATGGTGTAATTTGATTCCAGAATGGGCTATATCTCTCTCTCACTGATTTTGTTTTGGATTATTCTTCTATCCCTCTTTTAGTTTCTAGGTATTTAGTCATTGTGTTCCTTTCTTCCGTCATTTCCTCTCTCTCATCAGCGATGGAACATAATCTACAGGATCGAATTAGTTTTGGTTCTCTCTTCTTATAGCCTATGGTTGAGAACAAAAGAGGATTCGTTGTATATTCCCTTATATTATTTTGGTGTGCTTTCAGGTATTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTCAGTTGCAGGTGAGCCTATGCTGGACCTTTTGTTTCATGATCTGACAAAAGGCGTTCCATAAAAACACTTGTCTGAGACGAAAAAAAAAAAAAAAAGAAAGAAAAAAACTAATGTTTGTTCCTTCTGGGAAATTTAACGAAGTGTGTCCCTTAAACCTCGATATTTGTCTTGCAACTAGAAAATTTTAATCTTCAAACTTCTGGGGAGGATGAAATTTATTGACTTCGAACGTTTTTACTGCTTTATCTATTTGATTCAATGCAAAACCTGTCTGAATATTATTGCAACGTTTATGCTCGTTTTTGTTAGGAGATGGAGTTGCCATACAACCACGGCCTGAGGAACAAAGGTTTATGTCTAGTACCCATCTCTTGTACTGCAGGAGTTGCACGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAACCTCCCCCAAATTTGAGAAGACCATCTCACCATTCAATTGA

mRNA sequence

ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTAAGTTCCCGGCAGAAGTGGTGGAGGTAGAAACAATGATGGAACAGAAAAGGAACCTATGCTCTGTTGATGAGAGCAGCCTCACTTCTCTTACATCCAAGCGTCGCAAGGCAGATTTTTCTATCTCCTCTAAGGAAAAGAAAGACAAACTGGGCGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATTCGGAAAGACAGATACGGCATCTGTTCTTCTTGAGGCCATGGAATATATTCAATTCCTTCACGAGCAAGTCAAGGTATTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTCAGTTGCAGGAGATGGAGTTGCCATACAACCACGGCCTGAGGAACAAAGGTTTATGTCTAGTACCCATCTCTTGTACTGCAGGAGTTGCACGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAACCTCCCCCAAATTTGAGAAGACCATCTCACCATTCAATTGA

Coding sequence (CDS)

ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTAAGTTCCCGGCAGAAGTGGTGGAGGTAGAAACAATGATGGAACAGAAAAGGAACCTATGCTCTGTTGATGAGAGCAGCCTCACTTCTCTTACATCCAAGCGTCGCAAGGCAGATTTTTCTATCTCCTCTAAGGAAAAGAAAGACAAACTGGGCGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATTCGGAAAGACAGATACGGCATCTGTTCTTCTTGAGGCCATGGAATATATTCAATTCCTTCACGAGCAAGTCAAGGTATTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTCAGTTGCAGGAGATGGAGTTGCCATACAACCACGGCCTGAGGAACAAAGGTTTATGTCTAGTACCCATCTCTTGTACTGCAGGAGTTGCACGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAACCTCCCCCAAATTTGAGAAGACCATCTCACCATTCAATTGA

Protein sequence

MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDKLGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELPYNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN

Homology

[Close]

BLAST of Csor.00g250630 vs. ExPASy Swiss-Prot
Match: Q7XJU2 (Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 9.3e-44
Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 23  MMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDKLGERIMALQQLVSPFGKTDTAS 82
           MME KRN+CS+ ESS+     KR K+D S SSKE+KDK+GERI ALQQ+VSP+GKTDTAS
Sbjct: 10  MMENKRNVCSLGESSI-----KRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTAS 69

Query: 83  VLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELPYNHGLRNKGLCLVPISCTAGVA 142
           VLL+AM YI+FLHEQVKVLSAPYLQ+ P    +E+E    + LRN+GLCLVP+  T GVA
Sbjct: 70  VLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELE---QYSLRNRGLCLVPMENTVGVA 129

Query: 143 RSNGADIWAPVKT-TSPKFEKTI-SPF 168
           +SNGADIWAPVKT  SP F  T  SPF
Sbjct: 130 QSNGADIWAPVKTPLSPAFSVTSQSPF 148

[Close]

BLAST of Csor.00g250630 vs. ExPASy Swiss-Prot
Match: Q7XJU1 (Transcription factor bHLH154 OS=Arabidopsis thaliana OX=3702 GN=BHLH154 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.9e-39
Identity = 87/148 (58.78%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 21  ETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDKLGERIMALQQLVSPFGKTDT 80
           E MME KRN+ S++++ +     + + +D S SSKE+KDKL ERI ALQQLVSP+GKTDT
Sbjct: 9   EMMMETKRNVYSLEDNKI----KRHKSSDLSFSSKERKDKLAERISALQQLVSPYGKTDT 68

Query: 81  ASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELPYNHGLRNKGLCLVPISCTAG 140
           ASVLLE M+YIQFL EQVKVLSAPYLQ+TP+   +E+E    + LR+KGLCLVP+  T+ 
Sbjct: 69  ASVLLEGMQYIQFLQEQVKVLSAPYLQATPSTTEEEVE---EYSLRSKGLCLVPLEYTSE 128

Query: 141 VARSNGADIWAPVKTTSPKFEKTISPFN 169
           VA++NGADIWAPVKT +      +S  N
Sbjct: 129 VAQTNGADIWAPVKTPTSSHAFNLSSSN 149

[Close]

BLAST of Csor.00g250630 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.0e-23
Identity = 64/152 (42.11%), Postives = 93/152 (61.18%), Query Frame = 0


Query: 18  VEVETMMEQKRNLCSVDESSLTSL---------TSKRRKADFSISSK--EKKDKLGERIM 77
           +  ++  EQ +N+  + +SS   +          +KR K++ +  S   ++K+K+G+RI 
Sbjct: 296 IHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKEKMGDRIA 355

Query: 78  ALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQ------EMELP 137
           ALQQLVSPFGKTD ASVL EA+EYI+FLH+QV  LS PY++S  ++Q Q      E+E+ 
Sbjct: 356 ALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEVS 415

Query: 138 YNHGLRNKGLCLVPISCTAGVARSNGADIWAP 153
               LR++GLCLVP+S T  V      D W P
Sbjct: 416 EEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447

[Close]

BLAST of Csor.00g250630 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21
Identity = 57/106 (53.77%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 55  KEKKDKLGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQL 114
           K +K+ L ++I +LQQLVSPFGKTDTASVL EA+EYI+FLH+QV VLS PY++   + Q 
Sbjct: 280 KVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQ 339

Query: 115 QE--------MELPYNHGLRNKGLCLVPISCTAGVARSNGADIWAP 153
           Q+         +   NH LR  GLCLVPIS T  VA    AD W P
Sbjct: 340 QQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTADFWTP 385

[Close]

BLAST of Csor.00g250630 vs. ExPASy Swiss-Prot
Match: Q9LT67 (Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 64/133 (48.12%), Postives = 83/133 (62.41%), Query Frame = 0


Query: 34  DESSLTSLTSKRRKADFSIS-SKEKKDKLGERIMALQQLVSPFGKTDTASVLLEAMEYIQ 93
           D++       KR +   S+  +K +K++LGERI ALQQLVSP+GKTD ASVL EAM YI+
Sbjct: 132 DQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIK 191

Query: 94  FLHEQVKVLSAPYLQSTP----TVQLQEMELPYNHGLRNKGLCLVPISCTAGVARSNGAD 153
           FL +Q++VL +PYL +       V    M       LR++GLCLVP+S T  V  SNGAD
Sbjct: 192 FLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGAD 251

Query: 154 IWAPV---KTTSP 159
            W+P     TTSP
Sbjct: 252 FWSPATMGHTTSP 264

[Close]

BLAST of Csor.00g250630 vs. NCBI nr
Match: XP_022932623.1 (transcription factor bHLH153-like isoform X1 [Cucurbita moschata] >KAG6597671.1 Transcription factor basic helix-loop-helix 153, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029114.1 Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323 bits (829), Expect = 2.50e-111
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK
Sbjct: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP
Sbjct: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
           YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN
Sbjct: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168

[Close]

BLAST of Csor.00g250630 vs. NCBI nr
Match: XP_022972090.1 (transcription factor bHLH153-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 320 bits (820), Expect = 5.90e-110
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNASAKFPAEVVEVETMMEQK NLCSVDESSLTSLTSKRRKADFSIS+KEKKDK
Sbjct: 1   MIASSLCNASAKFPAEVVEVETMMEQKSNLCSVDESSLTSLTSKRRKADFSISAKEKKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP
Sbjct: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
           YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN
Sbjct: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168

[Close]

BLAST of Csor.00g250630 vs. NCBI nr
Match: XP_023540816.1 (transcription factor bHLH153-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318 bits (814), Expect = 4.85e-109
Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSIS+KEKKDK
Sbjct: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISAKEKKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP
Sbjct: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
           YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPK EK ISPFN
Sbjct: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKLEKIISPFN 168

[Close]

BLAST of Csor.00g250630 vs. NCBI nr
Match: XP_022158392.1 (transcription factor bHLH153-like isoform X1 [Momordica charantia])

HSP 1 Score: 295 bits (756), Expect = 3.26e-100
Identity = 152/168 (90.48%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNA+AKFPAEV+EVETMMEQKRN+CSVDES+LTSLT KR K DFSISSKE+KDK
Sbjct: 1   MIASSLCNATAKFPAEVMEVETMMEQKRNMCSVDESNLTSLTPKRHKTDFSISSKERKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERI+ALQQLVSP+GKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQE+E P
Sbjct: 61  LGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQELE-P 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
           Y+H LRN+GLCLVPISCTAGVARSNGADIWAPVKTTSPKFEK ISPFN
Sbjct: 121 YSHSLRNRGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKAISPFN 167

[Close]

BLAST of Csor.00g250630 vs. NCBI nr
Match: XP_038906434.1 (transcription factor bHLH153-like isoform X1 [Benincasa hispida])

HSP 1 Score: 285 bits (730), Expect = 3.00e-96
Identity = 149/168 (88.69%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNASAKFPAEV++VETMMEQKR+LCSVDES+LTSLTSKR K DFSISSKE+KDK
Sbjct: 1   MIASSLCNASAKFPAEVMDVETMMEQKRSLCSVDESALTSLTSKRHKTDFSISSKERKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERIMALQQLVSP+GKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTV LQE+E P
Sbjct: 61  LGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQEVE-P 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
            +H LR++GLCLVPISCTAGVARSNGADIWAPVKT SPK+EK ISPFN
Sbjct: 121 CSHSLRSRGLCLVPISCTAGVARSNGADIWAPVKTISPKYEKPISPFN 167

[Close]

BLAST of Csor.00g250630 vs. ExPASy TrEMBL
Match: A0A6J1F291 (transcription factor bHLH153-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439126 PE=4 SV=1)

HSP 1 Score: 323 bits (829), Expect = 1.21e-111
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK
Sbjct: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP
Sbjct: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
           YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN
Sbjct: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168

[Close]

BLAST of Csor.00g250630 vs. ExPASy TrEMBL
Match: A0A6J1I7K4 (transcription factor bHLH153-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470730 PE=4 SV=1)

HSP 1 Score: 320 bits (820), Expect = 2.86e-110
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNASAKFPAEVVEVETMMEQK NLCSVDESSLTSLTSKRRKADFSIS+KEKKDK
Sbjct: 1   MIASSLCNASAKFPAEVVEVETMMEQKSNLCSVDESSLTSLTSKRRKADFSISAKEKKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP
Sbjct: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
           YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN
Sbjct: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168

[Close]

BLAST of Csor.00g250630 vs. ExPASy TrEMBL
Match: A0A6J1DX43 (transcription factor bHLH153-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024885 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 1.58e-100
Identity = 152/168 (90.48%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNA+AKFPAEV+EVETMMEQKRN+CSVDES+LTSLT KR K DFSISSKE+KDK
Sbjct: 1   MIASSLCNATAKFPAEVMEVETMMEQKRNMCSVDESNLTSLTPKRHKTDFSISSKERKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERI+ALQQLVSP+GKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQE+E P
Sbjct: 61  LGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQELE-P 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
           Y+H LRN+GLCLVPISCTAGVARSNGADIWAPVKTTSPKFEK ISPFN
Sbjct: 121 YSHSLRNRGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKAISPFN 167

[Close]

BLAST of Csor.00g250630 vs. ExPASy TrEMBL
Match: A0A1S3BYX6 (transcription factor bHLH113-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494587 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 1.45e-96
Identity = 150/168 (89.29%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNASAKFPAEV+EVETMMEQKR+LCSVDES+LTSLT KR K DFSISSKE+KDK
Sbjct: 1   MIASSLCNASAKFPAEVMEVETMMEQKRSLCSVDESALTSLTPKRHKTDFSISSKERKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERIMALQQLVSP+GKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTV LQE+E P
Sbjct: 61  LGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQEVE-P 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
            +H LR++GLCLVPISCTAGVARSNGADIWAPVKT SPKFEK ISPFN
Sbjct: 121 CSHSLRSRGLCLVPISCTAGVARSNGADIWAPVKTISPKFEKHISPFN 167

[Close]

BLAST of Csor.00g250630 vs. ExPASy TrEMBL
Match: A0A0A0KYW4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G011680 PE=4 SV=1)

HSP 1 Score: 285 bits (729), Expect = 2.06e-96
Identity = 150/168 (89.29%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDK 60
           MIASSLCNASAKFPAEV+EVETMMEQKR LCSVDES+LTSLT KR K DFSISSKE+KDK
Sbjct: 1   MIASSLCNASAKFPAEVMEVETMMEQKRTLCSVDESALTSLTPKRHKTDFSISSKERKDK 60

Query: 61  LGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELP 120
           LGERIMALQQLVSP+GKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTV LQE+E P
Sbjct: 61  LGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQEVE-P 120

Query: 121 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKFEKTISPFN 168
            +H LR++GLCLVPISCTAGVARSNGADIWAPVKT SPKFEK ISPFN
Sbjct: 121 CSHSLRSRGLCLVPISCTAGVARSNGADIWAPVKTISPKFEKHISPFN 167

[Close]

BLAST of Csor.00g250630 vs. TAIR 10
Match: AT1G05710.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 6.6e-45
Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 23  MMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDKLGERIMALQQLVSPFGKTDTAS 82
           MME KRN+CS+ ESS+     KR K+D S SSKE+KDK+GERI ALQQ+VSP+GKTDTAS
Sbjct: 10  MMENKRNVCSLGESSI-----KRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTAS 69

Query: 83  VLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELPYNHGLRNKGLCLVPISCTAGVA 142
           VLL+AM YI+FLHEQVKVLSAPYLQ+ P    +E+E    + LRN+GLCLVP+  T GVA
Sbjct: 70  VLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELE---QYSLRNRGLCLVPMENTVGVA 129

Query: 143 RSNGADIWAPVKT-TSPKFEKTI-SPF 168
           +SNGADIWAPVKT  SP F  T  SPF
Sbjct: 130 QSNGADIWAPVKTPLSPAFSVTSQSPF 148

[Close]

BLAST of Csor.00g250630 vs. TAIR 10
Match: AT1G05710.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 6.6e-45
Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 23  MMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDKLGERIMALQQLVSPFGKTDTAS 82
           MME KRN+CS+ ESS+     KR K+D S SSKE+KDK+GERI ALQQ+VSP+GKTDTAS
Sbjct: 10  MMENKRNVCSLGESSI-----KRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTAS 69

Query: 83  VLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELPYNHGLRNKGLCLVPISCTAGVA 142
           VLL+AM YI+FLHEQVKVLSAPYLQ+ P    +E+E    + LRN+GLCLVP+  T GVA
Sbjct: 70  VLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELE---QYSLRNRGLCLVPMENTVGVA 129

Query: 143 RSNGADIWAPVKT-TSPKFEKTI-SPF 168
           +SNGADIWAPVKT  SP F  T  SPF
Sbjct: 130 QSNGADIWAPVKTPLSPAFSVTSQSPF 148

[Close]

BLAST of Csor.00g250630 vs. TAIR 10
Match: AT1G05710.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 6.6e-45
Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 23  MMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDKLGERIMALQQLVSPFGKTDTAS 82
           MME KRN+CS+ ESS+     KR K+D S SSKE+KDK+GERI ALQQ+VSP+GKTDTAS
Sbjct: 10  MMENKRNVCSLGESSI-----KRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTAS 69

Query: 83  VLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELPYNHGLRNKGLCLVPISCTAGVA 142
           VLL+AM YI+FLHEQVKVLSAPYLQ+ P    +E+E    + LRN+GLCLVP+  T GVA
Sbjct: 70  VLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELE---QYSLRNRGLCLVPMENTVGVA 129

Query: 143 RSNGADIWAPVKT-TSPKFEKTI-SPF 168
           +SNGADIWAPVKT  SP F  T  SPF
Sbjct: 130 QSNGADIWAPVKTPLSPAFSVTSQSPF 148

[Close]

BLAST of Csor.00g250630 vs. TAIR 10
Match: AT1G05710.5 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 6.6e-45
Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 0


Query: 23  MMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDKLGERIMALQQLVSPFGKTDTAS 82
           MME KRN+CS+ ESS+     KR K+D S SSKE+KDK+GERI ALQQ+VSP+GKTDTAS
Sbjct: 10  MMENKRNVCSLGESSI-----KRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTAS 69

Query: 83  VLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELPYNHGLRNKGLCLVPISCTAGVA 142
           VLL+AM YI+FLHEQVKVLSAPYLQ+ P    +E+E    + LRN+GLCLVP+  T GVA
Sbjct: 70  VLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELE---QYSLRNRGLCLVPMENTVGVA 129

Query: 143 RSNGADIWAPVKT-TSPKFEKTI-SPF 168
           +SNGADIWAPVKT  SP F  T  SPF
Sbjct: 130 QSNGADIWAPVKTPLSPAFSVTSQSPF 148

[Close]

BLAST of Csor.00g250630 vs. TAIR 10
Match: AT1G05710.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 4.4e-41
Identity = 98/169 (57.99%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 23  MMEQKRNLCSVDESSLTSLTSKRRKADFSISSKEKKDKLGERIMALQQLVSPFGKTDTAS 82
           MME KRN+CS+ ESS+     KR K+D S SSKE+KDK+GERI ALQQ+VSP+GKTDTAS
Sbjct: 10  MMENKRNVCSLGESSI-----KRHKSDLSFSSKERKDKVGERISALQQIVSPYGKTDTAS 69

Query: 83  VLLEAMEYIQFLHEQVK----------------------VLSAPYLQSTPTVQLQEMELP 142
           VLL+AM YI+FLHEQVK                      VLSAPYLQ+ P    +E+E  
Sbjct: 70  VLLDAMHYIEFLHEQVKVCSSIPSMIHSSLSEFPCSFVQVLSAPYLQTVPDATQEELE-- 129

Query: 143 YNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKT-TSPKFEKTI-SPF 168
             + LRN+GLCLVP+  T GVA+SNGADIWAPVKT  SP F  T  SPF
Sbjct: 130 -QYSLRNRGLCLVPMENTVGVAQSNGADIWAPVKTPLSPAFSVTSQSPF 170

The following BLAST results are available for this feature:

BLAST of Csor.00g250630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XJU2	9.3e-44	66.67	Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=...	[more]
Q7XJU1	6.9e-39	58.78	Transcription factor bHLH154 OS=Arabidopsis thaliana OX=3702 GN=BHLH154 PE=1 SV=...	[more]
Q8GXT3	9.0e-23	42.11	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
Q94JL3	1.7e-21	53.77	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q9LT67	2.2e-21	48.12	Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=...	[more]

BLAST of Csor.00g250630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932623.1	2.50e-111	100.00	transcription factor bHLH153-like isoform X1 [Cucurbita moschata] >KAG6597671.1 ...	[more]
XP_022972090.1	5.90e-110	98.81	transcription factor bHLH153-like isoform X1 [Cucurbita maxima]	[more]
XP_023540816.1	4.85e-109	98.21	transcription factor bHLH153-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022158392.1	3.26e-100	90.48	transcription factor bHLH153-like isoform X1 [Momordica charantia]	[more]
XP_038906434.1	3.00e-96	88.69	transcription factor bHLH153-like isoform X1 [Benincasa hispida]	[more]

BLAST of Csor.00g250630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F291	1.21e-111	100.00	transcription factor bHLH153-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I7K4	2.86e-110	98.81	transcription factor bHLH153-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1DX43	1.58e-100	90.48	transcription factor bHLH153-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A1S3BYX6	1.45e-96	89.29	transcription factor bHLH113-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0KYW4	2.06e-96	89.29	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G011680 PE=4 S...	[more]

BLAST of Csor.00g250630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05710.1	6.6e-45	66.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.4	6.6e-45	66.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.3	6.6e-45	66.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.5	6.6e-45	66.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.2	4.4e-41	57.99	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 53..100 e-value: 5.8E-4 score: 29.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 45..94 score: 11.807518
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 41..117 e-value: 1.4E-7 score: 33.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 43..109
None	No IPR available	PANTHER	PTHR16223:SF224	TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1	coord: 17..152
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 17..152
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 51..102 e-value: 1.61441E-22 score: 82.9995

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g250630.m01	Csor.00g250630.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding