Csor.00g250530 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g250530
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	membrane-associated 30 kDa protein, chloroplastic-like
Location	Csor_Chr06: 11258200 .. 11262063 (-)
RNA-Seq Expression	Csor.00g250530
Synteny	Csor.00g250530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCCAAACCCACGTTTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCATCTCAACCCTCTTCATCCAAGCCTTCCACCCTCTGTGTTGCCGCCAAGCCCTTGAGCACGTCCTTCCTTAATGGCGGAGGTACGTTTCCCTTGCTCTTAGCTTACCGTTCTCCATTTTGTTGATTTTAATGGCGGAGGTGTGATCCCCTGCTAAGTTTCATTTTATAATTGTTCCTTAGGGCATATTTTACTTGATTGGTACACATTCCTTTAGTGGGGTTCCCTCTTTTGGATGCCTACGCATACTTCCTTTCTTTTTTTCTAGAGTTAGGTTTCTTAAAAACCTGTAATATTTAGTGGAAATGCTGGCCAGCTTGACCGCTTTGTGTCCATCAATTTGAGATTGGGATTACCTCCTGGCGTAGGCTTCTTACAACATTAATCTAGGATCAATGAGCTGATTGGCTAACATGAGGCAACATTGTGCTATCTTATAATGAGTTAGGGGAACTTCTAGCTGGATATAGTTGATATAAGCAACTAATTTACTTAGAACTCAAATTAGAAGGCTTTTGATCACTTTAGAAACCAATTTCAAACCTCATGGTCCAACTAGAAATTGAACTCAATCCTCGGAGACTAAACAAAGCACTTAGAAACTTCAAGGATTAAGTAGAAATGGAAGTGTTAGTTTTGACAACCTAGGATCAAATAGAAACTAAGTTCAAATATCAGGAACCAAAAGTATATTCTACCTTAAAATATGAATCAAATTCCACTTAACTTTGTAATAGCTGTGTGCTTAATTACTCTAACAGGAAATCATAATTTTCCCTGCAGGGCACACCTTACAAATTACATGGATGAAGTCTTTACATTTTAATCGATCCCATGGTGGCAGACGTGGAGGTGCTCTTGGTGCTCACATGAACCTTTTTGATCGTTTTGCAAGGGTTGTTAAGGTAGTACTTTCAATTGTTTCATCAATTCGTTTAGTAATCTTTGGAATTCACGGATTTTGAGGATAACCATGACGCTTGCTTTCTCATGAGGTAGTCGTATGCTAATGCACTTATAAGTTCGTTTGAGGATCCGGAGAAAATTCTGGAGCAGACAGTGCTTGAAATGAATGATGACTTGACAAAGATGCGTCAAGCCACTGCACAGGTAAGTTTCAGAACCTTGTATTTATCATTTTTCTCTACTTGCGTTACCTTTGGCATTTCTCTTTGCTTCTTAGCCCGCAATGCTGTGTCTCCACTTTCAACTTTCCTTTATAAATTATTCATATTTCAAAGGGAATTAGAAGATGCATGTTATTAGGAAAATTGTACAAGGAAGCAAAATAATGAGGCATCTATTTCATTTTTTGACATGCATACTTAACCAATTAAAATTATGAAATGGACTTTTATTCTTGAAGGTACTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATGATTGGTAAAAATCTAGAACCATTCTCCATTTTCTTTGTGAAGTGATAGGTATACACCTTTCATTTCTAGTTTTAATATAGGTATCGAAAGGCGCAATTTGCTCTTCAAAAGGGAGACGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGTAAGTTAGAACAGATTCGTTGTCAGATCCGATTCCTATATTTCATGATAAACAGGAATGGTATTTATCAATTTGAAGAAACCTCTTAAATTCTTTTGTCCAATATGGAACTATTTCATGTTACTTTTTCTCCTATAGGTATGCTATTAGAAGCAATTTTAAGTTCAAAATTTTAATTCTGTTTGGCAAGATTTATGATTTATTCTGACCGATGATCACTGTGTTGTACCGTCAGGATAACGCAAATGCTTTGAAAGCTCAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACTCGGGTATGAAGTTCTAATGTATTTTCCGTTGACCATCACATGAAACATTTTAAATTATATTTTGTTAAATTCTTTTAAGGATACAGCCCAGATTCCCTTGCATTACATTCGTTGGCCATGTAAAAATATTAACCGTAAGGGTAAACAAGTATGAGGAAATCCATCTTCTTGTTGGAGCTATGAAAGAATGCTGTAAAGAACAGTTAATGTTATCTCTGTAGTCTATAGATATTGAGAAAAATTAGTATTCTTCTTTCTTGTTGAGATAATGCTGATCCCTATTACATTCCTAGTGTAGCTAGAATTAGAAACTGGTAGAGACAAGTTTTCATATAATATATGCTCGAACATTAGTATGATTCTAACTTCAAGCTTTTAAAACAAGGATAATTAAGCCTATAGAATTCAATTTTACCATTGAATCTTTTCTTTGTAGCTTTTAGAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGTTTGTGATTTAGTCAGATTGTTAAAAGTCTCTTTTTTCTCGAGTATCTTCCTTTATTGTTGATGATTGCTGATACCACCTTTCCATGGATTTAGGACTGCAACCAAAGTAAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTTGAGAAGATGGAGGAGAAAGGTAAGGAAGTGAAATATTTTAGTCAAGCATAGGCTTTCTTATCATCTAACATTACTTTATTTAAATATAGTTTCGTTGTAGTTTTTTCGTACTGTTGAGATTCTTGTCTATATGTTACTTATGGATAGATGATCTCCTTCTTGGCTTCTTCCTCGTTATGTTTGATTATCTTCCTCAAAATCTTGGTAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGGTAACAGTTCTCTGCTTTCCCTCCAAATCTAATTTGTGTTTGATTTTATTACTGGTCTATTGAGCTTAAATTCAGAAACTAGAAAGTATCATTTCTCTTACCTGTCCCTTTTTAAGATTTCTGTAAAAGCTTCTTGAGTCTGAGTAAATCCTTCAAGAAGCTTATGAGGGATTTCCTTTATGAAGGAATGAGGAGAAAGGGTAGCATTTAGACGAGTGGGAGGCGGTAATTGTTTCGTATTTTGTAATACCGCAAGTGTACGTGCCAAGTTTTAATATAGTGATAAGAGTGTTCGAGTATCGTCCTCAAGAGTTTCCAATTGATACGTACATTTTAAAACACATGTTGCTGCACAGCTCTGTTTTATTTTGGCTTTCAGCTATTTCCTATATTGTAGTTTGCTCTGCTGGAGGGCTCATCAGTTGACGACGAGCTAGCGGACTTGAAGAGAGAGTTATCTGGAAGCTCAAAGGTAAAATCATATTCCACTCTTTATATATAAGTTTATATCTGACCGTGGCTCGATCTTCTAAGAATGAAACCTAGAATAGGAACCCAATGGAAGCCTCGACTTTCGTAGTAAACTATAACAAGATCGCCTTCCTCGAAAGTTTTCTTTCATTGATGCTTCTCTGCGCAGCTTCCTTATACTTAAAAGTTTGATTTCTCCAAATGATCTTGAACTTCTTTATGGAGTAAGACAATCTGCTCAGCCATTTCACTAGCTTCCTGACTCAAATCAATAGCAAAAAGAAGATTAGCTTATTCCGCATCTAAATGGGAAAGTTTAGTATGTATGTACAATTTCAAACATTCCTTCAGTATTTGAACCTAACAACGGGATCCTCTCTATTTCTACAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCATTGCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATCTACTGAGGCAAAAGGCAAGAGAATTGTAG

mRNA sequence

ATGGCTGCCCAAACCCACGTTTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCATCTCAACCCTCTTCATCCAAGCCTTCCACCCTCTGTGTTGCCGCCAAGCCCTTGAGCACGTCCTTCCTTAATGGCGGAGGGCACACCTTACAAATTACATGGATGAAGTCTTTACATTTTAATCGATCCCATGGTGGCAGACGTGGAGGTGCTCTTGGTGCTCACATGAACCTTTTTGATCGTTTTGCAAGGGTTGTTAAGTCGTATGCTAATGCACTTATAAGTTCGTTTGAGGATCCGGAGAAAATTCTGGAGCAGACAGTGCTTGAAATGAATGATGACTTGACAAAGATGCGTCAAGCCACTGCACAGGTACTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATGATTGGTATCGAAAGGCGCAATTTGCTCTTCAAAAGGGAGACGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGATAACGCAAATGCTTTGAAAGCTCAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACTCGGCTTTTAGAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGACTGCAACCAAAGTAAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTTGAGAAGATGGAGGAGAAAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGTTTGCTCTGCTGGAGGGCTCATCAGTTGACGACGAGCTAGCGGACTTGAAGAGAGAGTTATCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCATTGCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATCTACTGAGGCAAAAGGCAAGAGAATTGTAG

Coding sequence (CDS)

ATGGCTGCCCAAACCCACGTTTTTACCGGATTAGCTTTGGCTTCAACTCCTTCTTCTTCATCTCAACCCTCTTCATCCAAGCCTTCCACCCTCTGTGTTGCCGCCAAGCCCTTGAGCACGTCCTTCCTTAATGGCGGAGGGCACACCTTACAAATTACATGGATGAAGTCTTTACATTTTAATCGATCCCATGGTGGCAGACGTGGAGGTGCTCTTGGTGCTCACATGAACCTTTTTGATCGTTTTGCAAGGGTTGTTAAGTCGTATGCTAATGCACTTATAAGTTCGTTTGAGGATCCGGAGAAAATTCTGGAGCAGACAGTGCTTGAAATGAATGATGACTTGACAAAGATGCGTCAAGCCACTGCACAGGTACTAGCTTCTCAAAAGCGCTTGGAAAACAAGTATAAATCTGCACAGCAAGCTGCTGATGATTGGTATCGAAAGGCGCAATTTGCTCTTCAAAAGGGAGACGATGATCTTGCTCGGGAAGCTTTAAAGAGGCGCAAATCATATGCTGATAACGCAAATGCTTTGAAAGCTCAACTTGATCAGCAGAAGAATGTTGTGGAAAATCTTGTTTCTAATACTCGGCTTTTAGAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGACTGCAACCAAAGTAAGTGAAATGTTGGGGAATGTTAACACAAGCAGTGCTCTTTCTGCTTTTGAGAAGATGGAGGAGAAAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGTTTGCTCTGCTGGAGGGCTCATCAGTTGACGACGAGCTAGCGGACTTGAAGAGAGAGTTATCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCATTGCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATCTACTGAGGCAAAAGGCAAGAGAATTGTAG

Protein sequence

MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL

Homology

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BLAST of Csor.00g250530 vs. ExPASy Swiss-Prot
Match: Q03943 (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum OX=3888 GN=IM30 PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.7e-113
Identity = 240/338 (71.01%), Postives = 277/338 (81.95%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           M  +  +F+GL     PS+  QPSSS      +  KPL+T+       T  +  +K    
Sbjct: 1   MTTKFQIFSGL-----PSAPLQPSSS------LLKKPLATTLFG----TRPVDTLKFRVM 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
             +   R GGA+G  MNLFDRFARVVKSYANAL+S+FEDPEKILEQ VLEMNDDLTKMRQ
Sbjct: 61  RIAKPVRGGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYK+AQQA+++WYRKAQ ALQKG++DLAREALKRRKS+ADNA++LK
Sbjct: 121 ATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQK+VV+NLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKSVVDNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKV+ MESQAEALGQLT DDLEGKFA+LE SSVDD+LA+LK+EL+GSSKKGEL
Sbjct: 241 SAFEKMEEKVMTMESQAEALGQLTTDDLEGKFAMLETSSVDDDLANLKKELAGSSKKGEL 300

Query: 301 PPGRTVSGSAL------PVRDAEIESELNLLRQKAREL 333
           PPGR+ + S        P RDA+IE EL  LR++++EL
Sbjct: 301 PPGRSSTTSTTSTKTGNPFRDADIEIELEQLRKRSKEL 323

[Close]

BLAST of Csor.00g250530 vs. ExPASy Swiss-Prot
Match: Q8S0J7 (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0895100 PE=1 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-109
Identity = 229/318 (72.01%), Postives = 262/318 (82.39%), Query Frame = 0


Query: 17  PSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHFNRSHGGRRGGALGAHM 76
           P +S + +   P++       L TSFLN G  +L++  ++  + NR          G   
Sbjct: 6   PPTSLRLAPPPPASASFRRTALRTSFLN-GSVSLRLIQVRQSNVNRFK------CNGIRS 65

Query: 77  NLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKY 136
           NL DRF+RVVKSYANA++SSFEDPEKIL+Q VLEMNDDLTKMRQATAQVLASQKRLENKY
Sbjct: 66  NLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKY 125

Query: 137 KSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVSN 196
           K+A+QA+DDWYR+AQ ALQKGD+DLAREALKRRKSYADNA++LKAQLDQQK VVENLVSN
Sbjct: 126 KAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSN 185

Query: 197 TRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ 256
           TR+LESKI EA+ KKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKV+AMESQ
Sbjct: 186 TRVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAMESQ 245

Query: 257 AEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGELPPGRTV---SGSALPV 316
           AEALGQL  DDLEGKFALLE SSVDD+LA +K+E+SGSS KGELPPGRT    SG+A P 
Sbjct: 246 AEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAARPF 305

Query: 317 RDAEIESELNLLRQKARE 332
           RD EIE+ELN LR+KA E
Sbjct: 306 RDIEIENELNELRKKANE 316

[Close]

BLAST of Csor.00g250530 vs. ExPASy Swiss-Prot
Match: O80796 (Membrane-associated protein VIPP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VIPP1 PE=1 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 4.4e-106
Identity = 225/333 (67.57%), Postives = 266/333 (79.88%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA +    TGL     P++SS PS+S      +   PL TSF       L++  ++    
Sbjct: 1   MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACD 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NR     R    GA MNLF+RF+RVVKSYANALISSFEDPEKILEQTV+EMN DLTKMRQ
Sbjct: 61  NR----LRCNGHGATMNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQK+L+NKYK+AQQ++DDWY++AQ AL KGD+DLAREALKRRKS+ADNA ALK
Sbjct: 121 ATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
            QLDQQK VV+NLVSNTRLLESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS AL
Sbjct: 181 TQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQEMIGTVNTSGAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKV+AMES+A+AL Q+  D+LEGKF +LE SSVDD+LADLK+ELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVMAMESEADALTQIGTDELEGKFQMLETSSVDDDLADLKKELSGSSKKGEL 300

Query: 301 PPGR-TVSGSA-LPVRDAEIESELNLLRQKARE 332
           PPGR TV+ S   P +D+EIE+ELN LR+KA +
Sbjct: 301 PPGRSTVAASTRYPFKDSEIENELNELRRKAND 329

[Close]

BLAST of Csor.00g250530 vs. ExPASy Swiss-Prot
Match: Q55707 (Protein sll0617 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0617 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.0e-46
Identity = 118/267 (44.19%), Postives = 168/267 (62.92%), Query Frame = 0


Query: 76  MNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENK 135
           M LFDR  RVV++  N L+S  EDPEK+LEQ V++M +DL ++RQA A+ +A +KR E +
Sbjct: 1   MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQR 60

Query: 136 YKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVS 195
                Q A  W  +A+ AL  G+++LAREAL R+KS  D A A + QL QQ+ + ENL  
Sbjct: 61  LNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRR 120

Query: 196 NTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMES 255
           N   LE+KI EA++KK+ L+ARA++AK   ++ + LG + TSSA SAFE+ME KVL ME+
Sbjct: 121 NLAALEAKISEAKTKKNMLQARAKAAKANAELQQTLGGLGTSSATSAFERMENKVLDMEA 180

Query: 256 QAEALGQLTADDLEGKFALLEGSS-VDDELADLKRELSGSSKKG---------ELPPGRT 315
            ++A G+L    +E +FA LE SS V+DELA LK  ++G +  G           P   +
Sbjct: 181 TSQAAGELAGFGIENQFAQLEASSGVEDELAALKASMAGGALPGTSAATPQLEAAPVDSS 240

Query: 316 VSGSALPVRDAEIESELNLLRQKAREL 333
           V  +     DA I+ EL+ LR++   L
Sbjct: 241 VPANNASQDDAVIDQELDDLRRRLNNL 267

[Close]

BLAST of Csor.00g250530 vs. ExPASy Swiss-Prot
Match: Q9RUB7 (Phage shock protein A homolog OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_1473 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.2e-24
Identity = 77/223 (34.53%), Postives = 127/223 (56.95%), Query Frame = 0


Query: 76  MNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENK 135
           M++FDR +R++++  N +IS  EDP KI++Q + +M       R   A  +A   +LE +
Sbjct: 1   MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLERE 60

Query: 136 YKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALKAQLDQQKNVVENLVS 195
             +  + A ++ +KA+ AL+ G +DLAREAL+R +++ D A     Q   Q++ V+ L +
Sbjct: 61  AGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKT 120

Query: 196 NTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMES 255
             R LE+KI E  SKK  L AR ++A+    +  + G      A+ AF +ME+KV  ME 
Sbjct: 121 QLRALEAKIDEMESKKTLLAARQKTAQAGETLDRVSGFSKAGGAMDAFNEMEQKVAGMED 180

Query: 256 QAEALGQLTAD-DLEGKFA-LLEGSSVDDELADLKRELSGSSK 297
           + +A+G+L  D D + +   L     VDD LA LK ++  S++
Sbjct: 181 RNKAMGELRNDQDFDAQLKDLGRDKDVDDALAALKAKVQSSNQ 223

[Close]

BLAST of Csor.00g250530 vs. NCBI nr
Match: KAG6597680.1 (Membrane-associated 30 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 605 bits (1560), Expect = 2.70e-217
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF
Sbjct: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332

[Close]

BLAST of Csor.00g250530 vs. NCBI nr
Match: XP_022932749.1 (membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 605 bits (1560), Expect = 1.14e-216
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF
Sbjct: 40  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 99

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 100 NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 159

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 160 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 219

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 220 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 279

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Sbjct: 280 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 339

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 340 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 371

[Close]

BLAST of Csor.00g250530 vs. NCBI nr
Match: XP_023540726.1 (membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597 bits (1538), Expect = 6.08e-214
Identity = 328/332 (98.80%), Postives = 328/332 (98.80%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALAS PSSSSQPSSSKPSTLCVAAKPL TSFLNGGGHTLQITWMKSLHF
Sbjct: 1   MAAQTHVFTGLALASPPSSSSQPSSSKPSTLCVAAKPLRTSFLNGGGHTLQITWMKSLHF 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGR GGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  NRSHGGRPGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKVLAMESQAEALGQLT DDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTVDDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332

[Close]

BLAST of Csor.00g250530 vs. NCBI nr
Match: KAG7029124.1 (Membrane-associated 30 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 594 bits (1531), Expect = 1.38e-212
Identity = 332/350 (94.86%), Postives = 332/350 (94.86%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF
Sbjct: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGK------------------FALLEGSSVDD 300
           SAFEKMEEKVLAMESQAEALGQLTADDLEGK                  FALLEGSSVDD
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKVTVLCFPSKSNLCLILLLFALLEGSSVDD 300

Query: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 301 ELADLKRELSGSSKKGELPPGRTVSGSALPVRDAEIESELNLLRQKAREL 350

[Close]

BLAST of Csor.00g250530 vs. NCBI nr
Match: XP_022972228.1 (membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 582 bits (1499), Expect = 4.42e-208
Identity = 322/332 (96.99%), Postives = 323/332 (97.29%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVF GLALASTPSSSS     KPSTLCVAAKPL T FLNGGGHTLQITWMK LHF
Sbjct: 1   MAAQTHVFPGLALASTPSSSS-----KPSTLCVAAKPLRTPFLNGGGHTLQITWMKPLHF 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKS+QQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSSQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 327

[Close]

BLAST of Csor.00g250530 vs. ExPASy TrEMBL
Match: A0A6J1EXW6 (membrane-associated 30 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439207 PE=3 SV=1)

HSP 1 Score: 605 bits (1560), Expect = 5.53e-217
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF
Sbjct: 40  MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 99

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 100 NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 159

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 160 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 219

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 220 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 279

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Sbjct: 280 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 339

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 340 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 371

[Close]

BLAST of Csor.00g250530 vs. ExPASy TrEMBL
Match: A0A6J1I9A6 (membrane-associated 30 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470819 PE=3 SV=1)

HSP 1 Score: 582 bits (1499), Expect = 2.14e-208
Identity = 322/332 (96.99%), Postives = 323/332 (97.29%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVF GLALASTPSSSS     KPSTLCVAAKPL T FLNGGGHTLQITWMK LHF
Sbjct: 1   MAAQTHVFPGLALASTPSSSS-----KPSTLCVAAKPLRTPFLNGGGHTLQITWMKPLHF 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKS+QQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSSQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSALPVRDAEIESELNLLRQKAREL
Sbjct: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 327

[Close]

BLAST of Csor.00g250530 vs. ExPASy TrEMBL
Match: A0A6J1GWI0 (membrane-associated 30 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457520 PE=3 SV=1)

HSP 1 Score: 560 bits (1444), Expect = 6.16e-200
Identity = 311/332 (93.67%), Postives = 320/332 (96.39%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA QTHVFTGLALASTPSSS QPSSSKP+TLCVA K L TSFLNGGG+ LQIT MKSLH 
Sbjct: 1   MAVQTHVFTGLALASTPSSSFQPSSSKPATLCVATKLLRTSFLNGGGNILQITEMKSLHL 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           +RSHG RRGGALGA MNLFDRFARVVKSYANAL+SSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  DRSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKS+ADNAN+LK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKV+AMESQAEALGQLTADDLEGKFALLEGSSVDDELA+LK+ELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL 300

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSA PVRDAEIESELN LRQKAREL
Sbjct: 301 PPGRTVSGSAFPVRDAEIESELNELRQKAREL 332

[Close]

BLAST of Csor.00g250530 vs. ExPASy TrEMBL
Match: A0A1S3BX93 (membrane-associated 30 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494597 PE=3 SV=1)

HSP 1 Score: 558 bits (1439), Expect = 3.56e-199
Identity = 310/332 (93.37%), Postives = 320/332 (96.39%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MAAQTHVFTGLALASTPSSS QPSSSKP+TLCVA+K L TSFLNGGG+TLQIT MKSLH 
Sbjct: 1   MAAQTHVFTGLALASTPSSSFQPSSSKPTTLCVASKLLRTSFLNGGGNTLQITRMKSLHL 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           +RSHG RRGGALGA MNLFDR AR+VKSYANAL+SSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  DRSHGSRRGGALGARMNLFDRVARLVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQ ALQKGDDDLAREALKRRKSYADNANALK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQLALQKGDDDLAREALKRRKSYADNANALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQK+VVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKSVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKVLAMESQAEALGQLT DDLEGKFALLEGSSVDDELA+LK+ELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVLAMESQAEALGQLTTDDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL 300

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSA PVRDAEIESELN LRQ+AREL
Sbjct: 301 PPGRTVSGSAFPVRDAEIESELNELRQRAREL 332

[Close]

BLAST of Csor.00g250530 vs. ExPASy TrEMBL
Match: A0A6J1INR4 (membrane-associated 30 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479163 PE=3 SV=1)

HSP 1 Score: 558 bits (1437), Expect = 7.18e-199
Identity = 308/332 (92.77%), Postives = 320/332 (96.39%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA QTHV+TGLALASTPSSS QPSSSKP+TLC A K L TSFLNGGG+ LQIT MKSLHF
Sbjct: 1   MAVQTHVYTGLALASTPSSSFQPSSSKPATLCAATKLLRTSFLNGGGNILQITEMKSLHF 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           ++SHG RRGGALGA MNLFDRFARVVKSYANAL+SSFEDPEKILEQTVLEMNDDLTKMRQ
Sbjct: 61  DQSHGCRRGGALGARMNLFDRFARVVKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKS+ADNAN+LK
Sbjct: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSFADNANSLK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
           AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL
Sbjct: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKV+AMESQAEALGQLTADDLEGKFALLEGSSVDDELA+LK+ELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVMAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGEL 300

Query: 301 PPGRTVSGSALPVRDAEIESELNLLRQKAREL 332
           PPGRTVSGSA PVRDAEIESELN LRQKARE+
Sbjct: 301 PPGRTVSGSAFPVRDAEIESELNELRQKAREM 332

[Close]

BLAST of Csor.00g250530 vs. TAIR 10
Match: AT1G65260.1 (plastid transcriptionally active 4 )

HSP 1 Score: 386.0 bits (990), Expect = 3.1e-107
Identity = 225/333 (67.57%), Postives = 266/333 (79.88%), Query Frame = 0


Query: 1   MAAQTHVFTGLALASTPSSSSQPSSSKPSTLCVAAKPLSTSFLNGGGHTLQITWMKSLHF 60
           MA +    TGL     P++SS PS+S      +   PL TSF       L++  ++    
Sbjct: 1   MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACD 60

Query: 61  NRSHGGRRGGALGAHMNLFDRFARVVKSYANALISSFEDPEKILEQTVLEMNDDLTKMRQ 120
           NR     R    GA MNLF+RF+RVVKSYANALISSFEDPEKILEQTV+EMN DLTKMRQ
Sbjct: 61  NR----LRCNGHGATMNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQ 120

Query: 121 ATAQVLASQKRLENKYKSAQQAADDWYRKAQFALQKGDDDLAREALKRRKSYADNANALK 180
           ATAQVLASQK+L+NKYK+AQQ++DDWY++AQ AL KGD+DLAREALKRRKS+ADNA ALK
Sbjct: 121 ATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALK 180

Query: 181 AQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 240
            QLDQQK VV+NLVSNTRLLESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS AL
Sbjct: 181 TQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQEMIGTVNTSGAL 240

Query: 241 SAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELADLKRELSGSSKKGEL 300
           SAFEKMEEKV+AMES+A+AL Q+  D+LEGKF +LE SSVDD+LADLK+ELSGSSKKGEL
Sbjct: 241 SAFEKMEEKVMAMESEADALTQIGTDELEGKFQMLETSSVDDDLADLKKELSGSSKKGEL 300

Query: 301 PPGR-TVSGSA-LPVRDAEIESELNLLRQKARE 332
           PPGR TV+ S   P +D+EIE+ELN LR+KA +
Sbjct: 301 PPGRSTVAASTRYPFKDSEIENELNELRRKAND 329

The following BLAST results are available for this feature:

BLAST of Csor.00g250530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03943	1.7e-113	71.01	Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum OX=3888 GN=IM...	[more]
Q8S0J7	1.9e-109	72.01	Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp...	[more]
O80796	4.4e-106	67.57	Membrane-associated protein VIPP1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q55707	3.0e-46	44.19	Protein sll0617 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sl...	[more]
Q9RUB7	4.2e-24	34.53	Phage shock protein A homolog OS=Deinococcus radiodurans (strain ATCC 13939 / DS...	[more]

BLAST of Csor.00g250530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597680.1	2.70e-217	100.00	Membrane-associated 30 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_022932749.1	1.14e-216	100.00	membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita moschata]	[more]
XP_023540726.1	6.08e-214	98.80	membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]
KAG7029124.1	1.38e-212	94.86	Membrane-associated 30 kDa protein, chloroplastic [Cucurbita argyrosperma subsp....	[more]
XP_022972228.1	4.42e-208	96.99	membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Csor.00g250530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXW6	5.53e-217	100.00	membrane-associated 30 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=...	[more]
A0A6J1I9A6	2.14e-208	96.99	membrane-associated 30 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1GWI0	6.16e-200	93.67	membrane-associated 30 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A1S3BX93	3.56e-199	93.37	membrane-associated 30 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1INR4	7.18e-199	92.77	membrane-associated 30 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]

BLAST of Csor.00g250530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65260.1	3.1e-107	67.57	plastid transcriptionally active 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 162..224
None	No IPR available	COILS	Coil	Coil	coord: 129..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..312
None	No IPR available	PANTHER	PTHR31088:SF13	MEMBRANE-ASSOCIATED 30 KDA PROTEIN, CHLOROPLASTIC-LIKE	coord: 1..331
IPR007157	PspA/IM30	PFAM	PF04012	PspA_IM30	coord: 77..290 e-value: 1.2E-54 score: 185.2
IPR007157	PspA/IM30	PANTHER	PTHR31088	MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC	coord: 1..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g250530.m01	Csor.00g250530.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010027	thylakoid membrane organization