Csor.00g250300 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAACCGAACAACGAAACGATGTGAATCAGTTTCTTCAACCATCGTGGTAATCCTACTCACCTTATTGACATGGAAAACGGTCTCATGCGACACTCGATGGCAGTAGTTTGTACCACCATTCTTTCCCTCGATAGATATTTGTAAAACAAATTAATATATATATATATAAATAGAATAAATTTGGAAATTATTAAATATAAATTTAAAAATTGGTAGGCGTATTAATAATTTTTCGAAGAAAATACCAAATTTTGTGGGTAATGTAATCGAAAAAAATTTATAGTTTTAACTAATTTTATAAAACATTTTTCACCTAAATGTTTCGTAGCTTGTTGGCTTAGTGGGGTAACTGCCCAGGTAGGGCGCGTTACTACACACCACTTCCCAGGTTCGAACCATTTGGGTACACACATAATAATGATAATAATAATCATCCTTCATACTTGAGGTATTTCAAAATACCTTTTTCTTACCTGATTATTTGTATTGAAATTTATACCAAATAAGTCGAAACACCGGAATAAAAAAATACAATCATATGGTATATGGTTACAATCAAATCTCATCCAGTATAAAAATAAACCAAATTAAATAATCATCTATGGACATGTCTATATTAATCCTCTCCCACATGCTTCACTTTTATATACAAATACATATATACTATATATTAAAATTTTAAAATTATGCTAATTATTATTATTATTTTCTGTTCGTTTGTTATATAAATGATTCTATAGGCCCATATGATTCCCGTGGGCCTAACATGGGCTCTCTCCAGAAGAAGCAGCCCAAAAGGAGCAACATTTGGGCCCATTGAGCCCATGGTGGGACTTCTCAAGGTACGGGATGGAATTTCATTTTTTTTTTTTAATATCACCACTGGCGAGAGGCAATGTGCAGCACATAAGCGAGCTTGAAGAAAGACGAGAAAGAGAGAGAAACAGAAACAGAAACAGCAACAGCAACAGCAACAACAAAGAAGACGACCGCCATAGCCATAGCTCAGACGTCGTTAAGTTCTGCTGCTCCTAACTTACTCAACCACGCTCTCTCTCTCTCTCTCGTAATGCTGAAAATTCCCTCACCTGAAACCCGATTATTCCAATAATTTTTTTGAGGTCATCGAGCCATCAAATTGATTGACACGATCGGAGCTTCAATTTCCTTTGGAGATCTGGTTTTTCTTCCATCGGATTAGCCTTCTTGTATTGTGGATAAGAATCTTCCTGTTCTCATTGTAAGTTTTCTTCTTCTTCATTTCCCCTTCCCTTCTTCATCTTCGTCTTCTTCTCCCATGCGTTTTGATTTAACAGTCATCAATTACAATCTTCGATTGTATGAGGGTATGTTATTCGCCAGATCTTGTGATTAGAGATCGATTCTTCCACTTCTTCAGTCTCATATGTGCTTTCCTTTTCTCTGTATGAACTTCTCTGAGAACTTGAGAAGGGGAGAGTTCCGGCAGAATCTGGATTAGTCATCTGCTTCATTCCGTTTCCATAGTCGTTTCAATTGCAAATTTATAAATTTCTCTTTGTTTTCCCCTTTGCAGGTATGGAGACGGAGGTGAGGAATCAGAATCAGAGAGGTTGTAAGCCTTTAGAACCGGAGGTGTTCTTACAGTGGGCAAAGAGGAAGCGACTGCGATGTGCTAGAATCAAAGACCCTGAGATCTCCGAGCGATTGTGCGGCGGCATACGGAAGAAAATCGCATCTCGGGCCGATCGCTGTGTGGTTTCTGGTTCCGAGAAAGAAAGAACCCCACTCCAACCTAATCGCCTAACTAGGTCAGTCAGAAATTCACGCCTATTTCCTGTTCCACCACACTCTTTTTGATTCCCGAGAAAGCAGATTAAAAAAAAAAAAAAAAAAGAATTAAAAGGACTTTTCTCTCCTCTGTAAATTTCTGGTTTGGATGTTCCCATTCATTCATTATTTGTGTTTCTATGGGCTACTTGGGTTCATGTATTTGTGGTTGTGTTGTGTTCTTGGGTCTTTCTCCTCCTCCTCCTCCCCCAGCTACCAAAGAGAGGGCAATTGAAGAGAGGTGTTTTCCCAGAATACGAGGTAAATCAATTTTGTGTGTTGTGGATCTGTTTGGTGACAGGAATTCTGAGGGCGTTACTACGCTGCGTAACGGTGCAGGCACATCCCCGTCGCCGGAGAAGGAGGACCGTTACTACGCCACCAGAGGATCCGCCGGCGCTGCTGTGGTGGATGAGAATGGAAGAATCTCAACCAACAGCAACGGCAACAGCAACAGCAAAGCGGAGGAAAGAGGGTTTGTTTGGCCGAAGCTGTTTATAGCTCTGTCAAGCAAAGAAAAGGAGGAAGACTTCATGGCCATGAAGGGGTGCAAGCTCCCTCAAAGGCCCAAAAAGAGGGCCAAGATGATTCAGAGAAGCTTACTTGTAAGCAACTGCAACAACACCATATTTCCCCCCATTTTCCTATCGCTGTGTGTTTGTATGTATGTTTGTTTGCTGTTAATGGTTGTTTGTTTGTGGCAGCTGATGAGCCCTGGGGCGTGGCTGAGTGAAATGAGCCAAGAGAGATATGAAGTGAGGGAAAAAAAGAGTACAAAGAAGGTAAATAACTGAACTTGTTTCTTTCCCATCATCTCTGTTAAATGAAATTGCTTGTTTTTTCTTCTGGGTTGAAGTAGAAGTTGAAGAAAATGCCTTTCCTTTTCTTTTTGTTCGTGGGTTTTGAATTTGCAGAGGCCAACTGGGTTGAAAGCCATGGGAAGCATGGAGAGTGATTCAGAATGA ATGTTGAACCGAACAACGAAACGATAATCTTCCTGTTCTCATTGTATGGAGACGGAGGTGAGGAATCAGAATCAGAGAGGTTGTAAGCCTTTAGAACCGGAGGTGTTCTTACAGTGGGCAAAGAGGAAGCGACTGCGATGTGCTAGAATCAAAGACCCTGAGATCTCCGAGCGATTGTGCGGCGGCATACGGAAGAAAATCGCATCTCGGGCCGATCGCTGTGTGGTTTCTGGTTCCGAGAAAGAAAGAACCCCACTCCAACCTAATCGCCTAACTAGGAATTCTGAGGGCGTTACTACGCTGCGTAACGGTGCAGGCACATCCCCGTCGCCGGAGAAGGAGGACCGTTACTACGCCACCAGAGGATCCGCCGGCGCTGCTGTGGTGGATGAGAATGGAAGAATCTCAACCAACAGCAACGGCAACAGCAACAGCAAAGCGGAGGAAAGAGGGTTTGTTTGGCCGAAGCTGTTTATAGCTCTGTCAAGCAAAGAAAAGGAGGAAGACTTCATGGCCATGAAGGGGTGCAAGCTCCCTCAAAGGCCCAAAAAGAGGGCCAAGATGATTCAGAGAAGCTTACTTCTGATGAGCCCTGGGGCGTGGCTGAGTGAAATGAGCCAAGAGAGATATGAAGTGAGGGAAAAAAAGAGTACAAAGAAGAGGCCAACTGGGTTGAAAGCCATGGGAAGCATGGAGAGTGATTCAGAATGA ATGTTGAACCGAACAACGAAACGATAATCTTCCTGTTCTCATTGTATGGAGACGGAGGTGAGGAATCAGAATCAGAGAGGTTGTAAGCCTTTAGAACCGGAGGTGTTCTTACAGTGGGCAAAGAGGAAGCGACTGCGATGTGCTAGAATCAAAGACCCTGAGATCTCCGAGCGATTGTGCGGCGGCATACGGAAGAAAATCGCATCTCGGGCCGATCGCTGTGTGGTTTCTGGTTCCGAGAAAGAAAGAACCCCACTCCAACCTAATCGCCTAACTAGGAATTCTGAGGGCGTTACTACGCTGCGTAACGGTGCAGGCACATCCCCGTCGCCGGAGAAGGAGGACCGTTACTACGCCACCAGAGGATCCGCCGGCGCTGCTGTGGTGGATGAGAATGGAAGAATCTCAACCAACAGCAACGGCAACAGCAACAGCAAAGCGGAGGAAAGAGGGTTTGTTTGGCCGAAGCTGTTTATAGCTCTGTCAAGCAAAGAAAAGGAGGAAGACTTCATGGCCATGAAGGGGTGCAAGCTCCCTCAAAGGCCCAAAAAGAGGGCCAAGATGATTCAGAGAAGCTTACTTCTGATGAGCCCTGGGGCGTGGCTGAGTGAAATGAGCCAAGAGAGATATGAAGTGAGGGAAAAAAAGAGTACAAAGAAGAGGCCAACTGGGTTGAAAGCCATGGGAAGCATGGAGAGTGATTCAGAATGA MLNRTTKR.SSCSHCMETEVRNQNQRGCKPLEPEVFLQWAKRKRLRCARIKDPEISERLCGGIRKKIASRADRCVVSGSEKERTPLQPNRLTRNSEGVTTLRNGAGTSPSPEKEDRYYATRGSAGAAVVDENGRISTNSNGNSNSKAEERGFVWPKLFIALSSKEKEEDFMAMKGCKLPQRPKKRAKMIQRSLLLMSPGAWLSEMSQERYEVREKKSTKKRPTGLKAMGSMESDSE Homology
BLAST of Csor.00g250300 vs. NCBI nr
Match: KAG6597703.1 (hypothetical protein SDJN03_10883, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 431 bits (1107), Expect = 1.03e-151 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g250300 vs. NCBI nr
Match: XP_022932618.1 (uncharacterized protein LOC111439121 isoform X2 [Cucurbita moschata]) HSP 1 Score: 426 bits (1096), Expect = 4.88e-150 Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Csor.00g250300 vs. NCBI nr
Match: XP_022932617.1 (uncharacterized protein LOC111439121 isoform X1 [Cucurbita moschata]) HSP 1 Score: 426 bits (1096), Expect = 9.01e-150 Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Csor.00g250300 vs. NCBI nr
Match: XP_022972123.1 (uncharacterized protein LOC111470755 isoform X2 [Cucurbita maxima]) HSP 1 Score: 425 bits (1092), Expect = 1.99e-149 Identity = 216/221 (97.74%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g250300 vs. NCBI nr
Match: XP_022972122.1 (uncharacterized protein LOC111470755 isoform X1 [Cucurbita maxima]) HSP 1 Score: 425 bits (1092), Expect = 3.67e-149 Identity = 216/221 (97.74%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g250300 vs. ExPASy TrEMBL
Match: A0A6J1F285 (uncharacterized protein LOC111439121 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439121 PE=4 SV=1) HSP 1 Score: 426 bits (1096), Expect = 2.36e-150 Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Csor.00g250300 vs. ExPASy TrEMBL
Match: A0A6J1EX97 (uncharacterized protein LOC111439121 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439121 PE=4 SV=1) HSP 1 Score: 426 bits (1096), Expect = 4.36e-150 Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Csor.00g250300 vs. ExPASy TrEMBL
Match: A0A6J1I8Z1 (uncharacterized protein LOC111470755 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470755 PE=4 SV=1) HSP 1 Score: 425 bits (1092), Expect = 9.62e-150 Identity = 216/221 (97.74%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g250300 vs. ExPASy TrEMBL
Match: A0A6J1I3X6 (uncharacterized protein LOC111470755 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470755 PE=4 SV=1) HSP 1 Score: 425 bits (1092), Expect = 1.77e-149 Identity = 216/221 (97.74%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g250300 vs. ExPASy TrEMBL
Match: A0A6J1DQU0 (uncharacterized protein LOC111022959 OS=Momordica charantia OX=3673 GN=LOC111022959 PE=4 SV=1) HSP 1 Score: 356 bits (914), Expect = 1.19e-122 Identity = 194/227 (85.46%), Postives = 205/227 (90.31%), Query Frame = 0
BLAST of Csor.00g250300 vs. TAIR 10
Match: AT1G55340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 187.2 bits (474), Expect = 1.5e-47 Identity = 112/220 (50.91%), Postives = 145/220 (65.91%), Query Frame = 0
BLAST of Csor.00g250300 vs. TAIR 10
Match: AT1G55340.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 182.2 bits (461), Expect = 4.9e-46 Identity = 111/220 (50.45%), Postives = 141/220 (64.09%), Query Frame = 0
BLAST of Csor.00g250300 vs. TAIR 10
Match: AT3G03880.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 173.3 bits (438), Expect = 2.3e-43 Identity = 112/211 (53.08%), Postives = 139/211 (65.88%), Query Frame = 0
BLAST of Csor.00g250300 vs. TAIR 10
Match: AT4G20300.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 98.6 bits (244), Expect = 7.1e-21 Identity = 63/166 (37.95%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of Csor.00g250300 vs. TAIR 10
Match: AT4G20300.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 89.0 bits (219), Expect = 5.6e-18 Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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