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Csor.00g248670 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTACGCTACTTTCTGCCTTCTGACCTTGATTTATGCGAAGGAAAAGTTATGAAGGTGCCTCTTGAGTATAGAAAGGAAATGTATCATTACTTTGCATGTGTTCTTATATCAAATTGATAAATATTTGAATTGTAGGCCAATGGCTGTTTCGATTAGGGAACCCATCATATCCTGTTGTGAAAGCTTGCTCTGCCATTTATTTGTTGAGTTTTCTAAGATCCAAGGAAGCGCTGAATTTTTCACTATGATTAGGTTTATTATAGGAAACCTGATCAGCCCTAAATGATGGGCATAGAGCGTGAAGAACTTTGATTAGTTCTCTAACATGTTCATGTTGTAGTATCAATTAGAGCCCCCAGTTTCAATCATGGAAGTGTGTATAAAGATTCGGACAGTTGATCTTTTGCGCCTTTAGTTTGTTAGATACCAAACAGAATTTAGATAATATGATGATTTTATACGAATCTCTTTTTATATTTTTGATGGTGGTTGAATATTACTATCAAGTCTAAGAGCATTGCATTTAAAATGATCTCGCATGTTAAATGGGAAGCTCATTGCAACTTTTCTTGGCGCAGGTTTTATTGGCCTGGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCTTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGTATGATATCGTACTCTTATTACTTTTTCATTGTTCATTGTCTTGCAAGCATGAATTATTTACAGATTATACATGGCACATAGCATTTATAAACGATGTTATGCATTAATCTTTTCTCCTGATGGCCAAGAGAATTCGAAGTTTTAAGTGGCTTTTTTCTTTACATTTGTCTCTGACACAAGACTGGGAGTTAGTTCTAATGTAATGACCCGACTTTTCGTACACATAGCGATCAGAGCCGTTATAAATGGTATCAAAGCCAAACACCAAGCAGTGTGCTAGTGAGGACGCTGGATTCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAATGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCTCTCTAACAAATGCGTTCTAAAATCTTGAGGAGAAGCCCTTGAAGGGAAAGCCCAGGGGACAATATCTGCCCGTGGTGGGTTTGGAAGGTTACAAAAGCACATTCCTTTTAAGGTCCGACAGCCTCTAAAGACATTTTAAATCCTTGAGGGGAAGCCGTTGAAGGGAAACCCAAAGAGGACCTATGGGTAGGTTTGGGTTGTGTTACATCTAATGCCTTTATCCTCCATATAATATAGCCCAGCTCACTACAAGTTCTCTAGTCAATGAATTGAGTTGCGGATTGCTATGCTTCCATGAGCCACACCTAATAATCTCTGAAATGTGATGCAGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAG ATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTTTTATTGGCCTGGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCTTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAG ATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTTTTATTGGCCTGGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCTTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAG MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMDSNPEK Homology
BLAST of Csor.00g248670 vs. ExPASy Swiss-Prot
Match: Q8S8T8 (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.7e-67 Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy Swiss-Prot
Match: B4FF80 (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 8.5e-62 Identity = 113/186 (60.75%), Postives = 131/186 (70.43%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.9e-19 Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy Swiss-Prot
Match: Q9LS43 (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy Swiss-Prot
Match: Q9M9A5 (Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.4e-18 Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 0
BLAST of Csor.00g248670 vs. NCBI nr
Match: XP_022951648.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita moschata] >XP_022951656.1 protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita moschata] >KAG6596199.1 Protein PLANT CADMIUM RESISTANCE 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027738.1 Protein PLANT CADMIUM RESISTANCE 10 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 411 bits (1057), Expect = 2.26e-145 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of Csor.00g248670 vs. NCBI nr
Match: XP_022971620.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita maxima]) HSP 1 Score: 407 bits (1046), Expect = 1.08e-143 Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0
BLAST of Csor.00g248670 vs. NCBI nr
Match: XP_023540976.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita pepo subsp. pepo] >XP_023540977.1 protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita pepo subsp. pepo] >XP_023540978.1 protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 405 bits (1040), Expect = 8.87e-143 Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0
BLAST of Csor.00g248670 vs. NCBI nr
Match: XP_008443175.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Cucumis melo]) HSP 1 Score: 360 bits (925), Expect = 2.95e-125 Identity = 166/189 (87.83%), Postives = 176/189 (93.12%), Query Frame = 0
BLAST of Csor.00g248670 vs. NCBI nr
Match: XP_038903486.1 (protein PLANT CADMIUM RESISTANCE 10 [Benincasa hispida]) HSP 1 Score: 360 bits (924), Expect = 4.35e-125 Identity = 170/190 (89.47%), Postives = 176/190 (92.63%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy TrEMBL
Match: A0A6J1GI45 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111454399 PE=4 SV=1) HSP 1 Score: 411 bits (1057), Expect = 1.10e-145 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy TrEMBL
Match: A0A6J1I689 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC111470294 PE=4 SV=1) HSP 1 Score: 407 bits (1046), Expect = 5.22e-144 Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy TrEMBL
Match: A0A1S3B7G5 (protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4 SV=1) HSP 1 Score: 360 bits (925), Expect = 1.43e-125 Identity = 166/189 (87.83%), Postives = 176/189 (93.12%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy TrEMBL
Match: A0A0A0LH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1) HSP 1 Score: 358 bits (920), Expect = 8.27e-125 Identity = 166/189 (87.83%), Postives = 174/189 (92.06%), Query Frame = 0
BLAST of Csor.00g248670 vs. ExPASy TrEMBL
Match: A0A6J1F1V0 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111441625 PE=4 SV=1) HSP 1 Score: 341 bits (874), Expect = 8.52e-118 Identity = 159/190 (83.68%), Postives = 167/190 (87.89%), Query Frame = 0
BLAST of Csor.00g248670 vs. TAIR 10
Match: AT2G40935.1 (PLAC8 family protein ) HSP 1 Score: 255.0 bits (650), Expect = 4.8e-68 Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 0
BLAST of Csor.00g248670 vs. TAIR 10
Match: AT2G40935.3 (PLAC8 family protein ) HSP 1 Score: 224.9 bits (572), Expect = 5.3e-59 Identity = 104/181 (57.46%), Postives = 126/181 (69.61%), Query Frame = 0
BLAST of Csor.00g248670 vs. TAIR 10
Match: AT2G40935.2 (PLAC8 family protein ) HSP 1 Score: 199.5 bits (506), Expect = 2.4e-51 Identity = 85/126 (67.46%), Postives = 100/126 (79.37%), Query Frame = 0
BLAST of Csor.00g248670 vs. TAIR 10
Match: AT3G18470.1 (PLAC8 family protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0
BLAST of Csor.00g248670 vs. TAIR 10
Match: AT1G49030.1 (PLAC8 family protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19 Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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