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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGACCAATGTCTATCAGAAATAAAGGCAGTGCCAAGGTAGATTGGTACTGACATATAGTTCATTTGAGAGCTTTTTTCTATCTATTTGCAAGCACCGTATCTTTTAATTCGTAGATATGAGTGACAAGGCCTATAGGGCACAAATTGGTTTCATTGATGCATATAGGTTGTGGTAATTTTCAAAAAGAGAGACATCTTTCTATTCACGTAAGTTTTTCAGTTTCTAAACCCTAAAAATTAACCACCATTACCAAAATGAAACTGCTGATTCCATCACCAGTCAATGTTTTTCGGTTACTTGGATATCTTTGATAAATGAGGAATATTGCCTTTTAATTCTTCTGAAGTGAGAACTTTTTTTCTTTTGCCCCTCTATTTTCTTCCCTTGCAGGCTACTGAGGAGAGGTACAAAGACAAAGGTGCATATATTGTTCTATAACATCCGAATTTTGATGTTCCAATCATACATAGTTTTGAAGCCATTACTCCACGACCAAAGGTACGAAGCCATTACTTTGTTTAGAAGATTATTTTCTGAGTTGGCAAATCTTTCCTACTATTTCCTTCACAATTATGGTGGTGAATTTTACTTAAATATATTAAAATCAGATATTTAAATGAGTCATGTGCTTGCATCACAGACTACTTATGGCTTGCCACCATCAACCAATAGCTAAAGAAATCCTAATACATGGATCGGAACGATGTTTTTTAATAATTATAATGATGTAAAAGTTAAAGAGAGAAATTTAAAAAAATTTATTTTTGTTAACATTTGGTCCATAGAACTCAAGGACACAAATGTACAACCTATAGAATAAAACATTTCCAAGAGCTAATACTTATTCTATTCTGTGGGGCCTTTGGTTAGAGAGAAACAATAGGAGATTGAGAGATCTAGTGAAGAGATGTGTTCTCTTGTGGGGTTTTAAGCTTCTCTCTGTAATTATTCTTTTGATCTCATTGTGTTAGATCGGAGTCCCATGGCTTGGGTTGTCTTTTTGTGTGTCTTCTGTATTCACCTTGAGTAGGAGTGAAGCTTTTCAGATGCTCTTAAGGGTAGGAGTTGTCATAGATGGCCTTTGTTGGAGGCGGGGATGTGTTGTCCCATTCCACCTCGCATTTATAGCCCATTTTCTTGTGTTATAATGTAGGAAAAGAAGTGTTGTGCTCTGTCAATCACTTGATAAGGCCACCGAAAATGAAGTTAACCGTTGCCTCTTTATATGCAGGTCAAATGTCATTGATTCCGACGAAGAATTAGATTTGGCAACTATGGCAACAATGGCAACTCATCCATGA mRNA sequence ATGGACCAATGTCTATCAGAAATAAAGGCAGTGCCAAGGCTACTGAGGAGAGGTACAAAGACAAAGGTGCATATATTGTTCTATAACATCCGAATTTTGATGTTCCAATCATACATAGTTTTGAAGCCATTACTCCACGACCAAAGGAAAAGAAGTGTTGTGCTCTGTCAATCACTTGATAAGGCCACCGAAAATGAAGTTAACCGTTGCCTCTTTATATGCAGGTCAAATGTCATTGATTCCGACGAAGAATTAGATTTGGCAACTATGGCAACAATGGCAACTCATCCATGA Coding sequence (CDS) ATGGACCAATGTCTATCAGAAATAAAGGCAGTGCCAAGGCTACTGAGGAGAGGTACAAAGACAAAGGTGCATATATTGTTCTATAACATCCGAATTTTGATGTTCCAATCATACATAGTTTTGAAGCCATTACTCCACGACCAAAGGAAAAGAAGTGTTGTGCTCTGTCAATCACTTGATAAGGCCACCGAAAATGAAGTTAACCGTTGCCTCTTTATATGCAGGTCAAATGTCATTGATTCCGACGAAGAATTAGATTTGGCAACTATGGCAACAATGGCAACTCATCCATGA Protein sequence MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRKRSVVLCQSLDKATENEVNRCLFICRSNVIDSDEELDLATMATMATHP
Homology
BLAST of Csor.00g247750 vs. NCBI nr
Match: KAG6596291.1 (hypothetical protein SDJN03_09471, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193 bits (491), Expect = 4.53e-62 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
Query: 1 MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRKRSVVLCQSLD 60
MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRKRSVVLCQSLD
Sbjct: 1 MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRKRSVVLCQSLD 60
Query: 61 KATENEVNRCLFICRSNVIDSDEELDLATMATMATHP 97
KATENEVNRCLFICRSNVIDSDEELDLATMATMATHP
Sbjct: 61 KATENEVNRCLFICRSNVIDSDEELDLATMATMATHP 97
BLAST of Csor.00g247750 vs. NCBI nr
Match: KAG7027840.1 (hypothetical protein SDJN02_09017 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 127 bits (319), Expect = 3.63e-36 Identity = 71/97 (73.20%), Postives = 71/97 (73.20%), Query Frame = 0
Query: 1 MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRKRSVVLCQSLD 60
MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQR
Sbjct: 1 MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQR----------- 60
Query: 61 KATENEVNRCLFICRSNVIDSDEELDLATMATMATHP 97
SNVIDSDEELDLATMATMATHP
Sbjct: 61 ---------------SNVIDSDEELDLATMATMATHP 71
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6596291.1 | 4.53e-62 | 100.00 | hypothetical protein SDJN03_09471, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7027840.1 | 3.63e-36 | 73.20 | hypothetical protein SDJN02_09017 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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