Csor.00g246890 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g246890
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	17.3 kDa class I heat shock protein-like
Location	Csor_Chr06: 1347057 .. 1347650 (+)
RNA-Seq Expression	Csor.00g246890
Synteny	Csor.00g246890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATTCGTTTCAACACCTTCTTCCCTACTGATCGCAAGGAACGCTACTACGTTGAGGACCGCCCCTCAGCCGGCAAGTCCGCTGAGGATTGGAAAGGGCGGTACTACGTCGAGGATCGACGCTCGTTCGACAAATTCCCCGAGGAACAGAAAGAACGCTACTACATCAAGGATCGCAATTCTTACGATCAATTCCACGAGAAAGACGCCCTCGCCGGTCCCTTCCGTACTTCCATGGCTTCTAATTCCTCCGCCATGAACGCTCAGATTGACTTCAAGGAGACTGCCGATGCGCACGTGTTGAGGCTAGAGCTTCCTGGAGTGAAAAAGCACGAAGTCAAATTGGAGATTGAAGACAATGGAGGCCTCTGTATCAGCACTGAAATTAGGGCTGAGAAAGAAGAGATAAGCGACATTTGGCGCCGTGTGGAACGAAGCAGCGGAAGATTCTACCGGCGTGTTGTTCTACCGGAGAGCGCCGACGTGGATAAGGTCAAAGCGGAAATGAATAACGGAATACTAACAGTTACAGTGCCCAAACACCATTTCAAGAAGCCGATCGCCCGAATCGTCCAAATCTCTGGCCATTAA

mRNA sequence

ATGTCGATTCGTTTCAACACCTTCTTCCCTACTGATCGCAAGGAACGCTACTACGTTGAGGACCGCCCCTCAGCCGGCAAGTCCGCTGAGGATTGGAAAGGGCGGTACTACGTCGAGGATCGACGCTCGTTCGACAAATTCCCCGAGGAACAGAAAGAACGCTACTACATCAAGGATCGCAATTCTTACGATCAATTCCACGAGAAAGACGCCCTCGCCGGTCCCTTCCGTACTTCCATGGCTTCTAATTCCTCCGCCATGAACGCTCAGATTGACTTCAAGGAGACTGCCGATGCGCACGTGTTGAGGCTAGAGCTTCCTGGAGTGAAAAAGCACGAAGTCAAATTGGAGATTGAAGACAATGGAGGCCTCTGTATCAGCACTGAAATTAGGGCTGAGAAAGAAGAGATAAGCGACATTTGGCGCCGTGTGGAACGAAGCAGCGGAAGATTCTACCGGCGTGTTGTTCTACCGGAGAGCGCCGACGTGGATAAGGTCAAAGCGGAAATGAATAACGGAATACTAACAGTTACAGTGCCCAAACACCATTTCAAGAAGCCGATCGCCCGAATCGTCCAAATCTCTGGCCATTAA

Coding sequence (CDS)

ATGTCGATTCGTTTCAACACCTTCTTCCCTACTGATCGCAAGGAACGCTACTACGTTGAGGACCGCCCCTCAGCCGGCAAGTCCGCTGAGGATTGGAAAGGGCGGTACTACGTCGAGGATCGACGCTCGTTCGACAAATTCCCCGAGGAACAGAAAGAACGCTACTACATCAAGGATCGCAATTCTTACGATCAATTCCACGAGAAAGACGCCCTCGCCGGTCCCTTCCGTACTTCCATGGCTTCTAATTCCTCCGCCATGAACGCTCAGATTGACTTCAAGGAGACTGCCGATGCGCACGTGTTGAGGCTAGAGCTTCCTGGAGTGAAAAAGCACGAAGTCAAATTGGAGATTGAAGACAATGGAGGCCTCTGTATCAGCACTGAAATTAGGGCTGAGAAAGAAGAGATAAGCGACATTTGGCGCCGTGTGGAACGAAGCAGCGGAAGATTCTACCGGCGTGTTGTTCTACCGGAGAGCGCCGACGTGGATAAGGTCAAAGCGGAAATGAATAACGGAATACTAACAGTTACAGTGCCCAAACACCATTTCAAGAAGCCGATCGCCCGAATCGTCCAAATCTCTGGCCATTAA

Protein sequence

MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDRNSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHFKKPIARIVQISGH

Homology

[Close]

BLAST of Csor.00g246890 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-30
Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 75  PFRTSM-ASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGLCISTEIRAE 134
           PF +S+ A NS+ ++ ++D+KET +AHV + ++PG+KK EVKLEI+D   L IS E   E
Sbjct: 31  PFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVE 90

Query: 135 KEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHFKKPIARIVQ 194
           KE+ +D W RVERSSG+  RR  LPE+A VD+VKA M NG+LTVTVPK   KKP  + + 
Sbjct: 91  KEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAID 150

Query: 195 ISG 197
           ISG
Sbjct: 151 ISG 153

[Close]

BLAST of Csor.00g246890 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-30
Identity = 67/122 (54.92%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 76  FRTSM-ASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGLCISTEIRAEK 135
           F TS+ A NS+ +N ++D+KET +AHV   ++PG+KK EVK++IED+  L IS E   EK
Sbjct: 32  FPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEK 91

Query: 136 EEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHFKKPIARIVQI 195
           E+ +D W RVERSSG F RR  LPE+A V++VKA M NG+LTVTVPK   KKP  + ++I
Sbjct: 92  EDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEI 151

Query: 196 SG 197
           SG
Sbjct: 152 SG 153

[Close]

BLAST of Csor.00g246890 vs. ExPASy Swiss-Prot
Match: Q943E7 (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.9e-30
Identity = 71/146 (48.63%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 57  IKDRNSYDQFHE-KDALAGPFR-----TSMASNSSAMNAQIDFKETADAHVLRLELPGVK 116
           ++  N +D F +  D   G FR     TS    ++  NA++D+KET ++HV + +LPGVK
Sbjct: 4   VRRSNVFDPFADFWDPFDGVFRSLVPATSDRDTAAFANARVDWKETPESHVFKADLPGVK 63

Query: 117 KHEVKLEIEDNGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEM 176
           K EVK+E+E+   L IS +   EKE+ +D W RVERSSG+F RR  LPE+A VD+VKA M
Sbjct: 64  KEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASM 123

Query: 177 NNGILTVTVPKHHFKKPIARIVQISG 197
            NG+LTVTVPK   KKP  + ++ISG
Sbjct: 124 ENGVLTVTVPKAEVKKPEVKAIEISG 149

[Close]

BLAST of Csor.00g246890 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.9e-30
Identity = 64/122 (52.46%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 75  PFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGLCISTEIRAEK 134
           P  +  A NS+ ++ ++D+KET +AHV + ++PG+KK EVK++IED+  L IS E   EK
Sbjct: 33  PTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEK 92

Query: 135 EEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHFKKPIARIVQI 194
           E+ +D W RVERSSG+F RR  LPE+A V++VKA M NG+LTVTVPK   KKP  + ++I
Sbjct: 93  EDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEI 152

Query: 195 SG 197
           SG
Sbjct: 153 SG 154

[Close]

BLAST of Csor.00g246890 vs. ExPASy Swiss-Prot
Match: P12810 (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum OX=4565 GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-29
Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 57  IKDRNSYDQFHEKDALAGPFRT----------SMASNSSAMNAQIDFKETADAHVLRLEL 116
           ++  N +D F   D  A PF T            +  ++  NA++D+KET +AHV +++L
Sbjct: 4   VRRSNVFDPF--ADLWADPFDTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDL 63

Query: 117 PGVKKHEVKLEIEDNGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKV 176
           PGVKK EVK+E+ED   L +S E   EKE+ +D W RVERSSG+F RR  LPE A V++V
Sbjct: 64  PGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEV 123

Query: 177 KAEMNNGILTVTVPKHHFKKPIARIVQISG 197
           KA + NG+LTVTVPK   KKP  + ++ISG
Sbjct: 124 KAGLENGVLTVTVPKAEVKKPEVKAIEISG 151

[Close]

BLAST of Csor.00g246890 vs. NCBI nr
Match: KAG6596377.1 (17.3 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394 bits (1012), Expect = 2.83e-138
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR
Sbjct: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60

Query: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120
           NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED
Sbjct: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120

Query: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180
           NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP
Sbjct: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180

Query: 181 KHHFKKPIARIVQISGH 197
           KHHFKKPIARIVQISGH
Sbjct: 181 KHHFKKPIARIVQISGH 197

[Close]

BLAST of Csor.00g246890 vs. NCBI nr
Match: KAG7027926.1 (17.3 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394 bits (1012), Expect = 2.50e-137
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR
Sbjct: 62  MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 121

Query: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120
           NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED
Sbjct: 122 NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 181

Query: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180
           NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP
Sbjct: 182 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 241

Query: 181 KHHFKKPIARIVQISGH 197
           KHHFKKPIARIVQISGH
Sbjct: 242 KHHFKKPIARIVQISGH 258

[Close]

BLAST of Csor.00g246890 vs. NCBI nr
Match: XP_022941841.1 (18.1 kDa class I heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 389 bits (998), Expect = 3.86e-136
Identity = 193/197 (97.97%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MSIRFN FFPTDRKERYYVEDRPS GKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR
Sbjct: 1   MSIRFNDFFPTDRKERYYVEDRPSGGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60

Query: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120
           NSYDQFHEKDALAGPFRTSMASNSSAMNAQ+DFKETADAHVLRLELPG+KKHEVKLEIED
Sbjct: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQVDFKETADAHVLRLELPGMKKHEVKLEIED 120

Query: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180
           NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP
Sbjct: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180

Query: 181 KHHFKKPIARIVQISGH 197
           KHHFKKPIARIVQISGH
Sbjct: 181 KHHFKKPIARIVQISGH 197

[Close]

BLAST of Csor.00g246890 vs. NCBI nr
Match: XP_023539337.1 (18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386 bits (992), Expect = 3.17e-135
Identity = 193/197 (97.97%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MSIRFN FFPTDRKERYYVEDRPS GKS EDWKGRYYVEDRRSFDKFPEEQKERYYIKDR
Sbjct: 1   MSIRFNNFFPTDRKERYYVEDRPSGGKSPEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60

Query: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120
           NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED
Sbjct: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120

Query: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180
           NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGIL VTVP
Sbjct: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILIVTVP 180

Query: 181 KHHFKKPIARIVQISGH 197
           KHHFKKPIARIVQISGH
Sbjct: 181 KHHFKKPIARIVQISGH 197

[Close]

BLAST of Csor.00g246890 vs. NCBI nr
Match: XP_022971336.1 (17.3 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 378 bits (971), Expect = 5.05e-132
Identity = 190/197 (96.45%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MSIRFN FFPTDRKERY VEDRPS GKS EDWKGRYYVEDRRSFDKFPEEQKERYYIKDR
Sbjct: 1   MSIRFNNFFPTDRKERYCVEDRPSGGKSPEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60

Query: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120
           NSYDQFHEKDALA PFRTSMASNSSAMNAQ DFKETADAHVLRLELPGVKKHEVKLEIED
Sbjct: 61  NSYDQFHEKDALARPFRTSMASNSSAMNAQFDFKETADAHVLRLELPGVKKHEVKLEIED 120

Query: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180
           NGGLCISTEIRAEKEEISDIWRRVERSSGR YRRVVLPESADVDKVKAEMNNGILTVTVP
Sbjct: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRLYRRVVLPESADVDKVKAEMNNGILTVTVP 180

Query: 181 KHHFKKPIARIVQISGH 197
           KHHFKKPIARIVQISGH
Sbjct: 181 KHHFKKPIARIVQISGH 197

[Close]

BLAST of Csor.00g246890 vs. ExPASy TrEMBL
Match: A0A6J1FM77 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111447079 PE=3 SV=1)

HSP 1 Score: 389 bits (998), Expect = 1.87e-136
Identity = 193/197 (97.97%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MSIRFN FFPTDRKERYYVEDRPS GKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR
Sbjct: 1   MSIRFNDFFPTDRKERYYVEDRPSGGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60

Query: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120
           NSYDQFHEKDALAGPFRTSMASNSSAMNAQ+DFKETADAHVLRLELPG+KKHEVKLEIED
Sbjct: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQVDFKETADAHVLRLELPGMKKHEVKLEIED 120

Query: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180
           NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP
Sbjct: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180

Query: 181 KHHFKKPIARIVQISGH 197
           KHHFKKPIARIVQISGH
Sbjct: 181 KHHFKKPIARIVQISGH 197

[Close]

BLAST of Csor.00g246890 vs. ExPASy TrEMBL
Match: A0A6J1I321 (17.3 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111470089 PE=3 SV=1)

HSP 1 Score: 378 bits (971), Expect = 2.45e-132
Identity = 190/197 (96.45%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MSIRFN FFPTDRKERY VEDRPS GKS EDWKGRYYVEDRRSFDKFPEEQKERYYIKDR
Sbjct: 1   MSIRFNNFFPTDRKERYCVEDRPSGGKSPEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60

Query: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120
           NSYDQFHEKDALA PFRTSMASNSSAMNAQ DFKETADAHVLRLELPGVKKHEVKLEIED
Sbjct: 61  NSYDQFHEKDALARPFRTSMASNSSAMNAQFDFKETADAHVLRLELPGVKKHEVKLEIED 120

Query: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180
           NGGLCISTEIRAEKEEISDIWRRVERSSGR YRRVVLPESADVDKVKAEMNNGILTVTVP
Sbjct: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRLYRRVVLPESADVDKVKAEMNNGILTVTVP 180

Query: 181 KHHFKKPIARIVQISGH 197
           KHHFKKPIARIVQISGH
Sbjct: 181 KHHFKKPIARIVQISGH 197

[Close]

BLAST of Csor.00g246890 vs. ExPASy TrEMBL
Match: H6TB36 (HSP22.8 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 294 bits (753), Expect = 3.54e-99
Identity = 147/198 (74.24%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MS+RF+ FFPTDRKERYYVEDRP   K  ED K  Y+ EDRR FDKF +++KERYY++DR
Sbjct: 1   MSLRFSNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYVEDR 60

Query: 61  NSYDQFHEKDALAG-PFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIE 120
           +SY QFHEKD +A  PFR     NSSA+NAQID+KETADAHV +L+LPGVKKHEVKLEIE
Sbjct: 61  HSYGQFHEKDVIAADPFR-----NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIE 120

Query: 121 DNGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTV 180
           ++G LCISTEIRAE+EE +DIWRRVERSSGRFYRR+VLPE ADVDKV+AEM+NG+LTVTV
Sbjct: 121 ESGVLCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTV 180

Query: 181 PKHHFKKPIARIVQISGH 197
           PK+HFKKP AR+VQI+GH
Sbjct: 181 PKYHFKKPTARVVQIAGH 193

[Close]

BLAST of Csor.00g246890 vs. ExPASy TrEMBL
Match: A0A6J1F916 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111441940 PE=3 SV=1)

HSP 1 Score: 287 bits (735), Expect = 2.24e-96
Identity = 144/197 (73.10%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60
           MSI F  FFP+DRKERYYVE+R S   S E+ K R YV+ RR FD   +++K+RYY++DR
Sbjct: 1   MSIPFRNFFPSDRKERYYVEERSSYDNSPENRKERNYVQGRRLFDNLHQDRKDRYYVEDR 60

Query: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIED 120
            SYD   EKDA+A PFRTSMASNSSA+NAQID+KETADAHVLRLELPGVKK  VKLEIE+
Sbjct: 61  PSYDHIREKDAVADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEE 120

Query: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180
           +G +CIS EIRAEKEE +DIWRRVERSSG+FYRR+VLP+ ADVDKVKAEM NG+LTVTVP
Sbjct: 121 SGAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVP 180

Query: 181 KHHFKKPIARIVQISGH 197
           K+ FKKP+AR+VQISGH
Sbjct: 181 KYQFKKPMARMVQISGH 197

[Close]

BLAST of Csor.00g246890 vs. ExPASy TrEMBL
Match: A0A6J1CWJ7 (16.9 kDa class I heat shock protein 3-like OS=Momordica charantia OX=3673 GN=LOC111014951 PE=3 SV=1)

HSP 1 Score: 271 bits (693), Expect = 9.22e-90
Identity = 138/212 (65.09%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MSIRFNTFFPTDRKERYYVEDRPSAGKSAEDWKGRYYVEDRRSFDK-------------- 60
           MSIRF+  FP+DRKERYY EDR S+ +   + K  YYV+D  SF +              
Sbjct: 1   MSIRFSNPFPSDRKERYYGEDRHSSDRFPGERKESYYVDDGHSFHEDLKERCCVENRRSG 60

Query: 61  -FPEEQKERYYIKDRNSYDQFHEKDALAGPFRTSMASNSSAMNAQIDFKETADAHVLRLE 120
            FPE++KERYY+++R+SYD  H+K+A+AGPFR+SMAS SSA NA ID+KETADAHV R+E
Sbjct: 61  SFPEDRKERYYVENRHSYDDVHDKNAIAGPFRSSMASKSSAANAPIDWKETADAHVFRIE 120

Query: 121 LPGVKKHEVKLEIEDNGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDK 180
           LPGVKKHEVK+E+E+NG LCIS EIRAEKEE SD+WRRVERSSG+FY+R+ LPESADVDK
Sbjct: 121 LPGVKKHEVKVEVEENGVLCISGEIRAEKEEKSDMWRRVERSSGKFYQRISLPESADVDK 180

Query: 181 VKAEMNNGILTVTVPKHHFKKPIARIVQISGH 197
           VKAEMNNG+LT+TVPKH F+    R+VQISGH
Sbjct: 181 VKAEMNNGVLTITVPKHRFRMASPRVVQISGH 212

[Close]

BLAST of Csor.00g246890 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 7.0e-30
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 83  NSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGLCISTEIRAEKEEISDIWR 142
           NS+ +NA++D++ET +AHV + +LPG+KK EVK+EIE++  L IS E   EKE+ +D W 
Sbjct: 40  NSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWH 99

Query: 143 RVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHFKKPIARIVQISG 197
           RVERSSG+F RR  LPE+  +D+VKA M NG+LTVTVPK   KK   + +QISG
Sbjct: 100 RVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Csor.00g246890 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 4.5e-29
Identity = 67/124 (54.03%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 76  FRTSMASNSSAM-NAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGLCISTEIRAEK 135
           F +S++  +SA+ NA++D+KETA+AHV + +LPG+KK EVK+EIED+  L IS E   EK
Sbjct: 34  FPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEK 93

Query: 136 EEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHFKKPIARI--V 195
           EE  D W RVERSSG+F R+  LPE+  +D+VKA M NG+LTVTVPK    K  A++  +
Sbjct: 94  EEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSI 153

Query: 196 QISG 197
            ISG
Sbjct: 154 DISG 157

[Close]

BLAST of Csor.00g246890 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 7.8e-29
Identity = 65/118 (55.08%), Postives = 85/118 (72.03%), Query Frame = 0


Query: 81  ASNSSAMNAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGLCISTEIRAEKEEISDI 140
           +S+S+  NA++D+KETA+AHV + +LPG+KK EVK+EIED+  L IS E   EKEE  D 
Sbjct: 38  SSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDT 97

Query: 141 WRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHFKKPIARI--VQISG 197
           W RVERSSG F R+  LPE+  +D+VKA M NG+LTVTVPK    K  A++  + ISG
Sbjct: 98  WHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDISG 155

[Close]

BLAST of Csor.00g246890 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 88  NAQIDFKETADAHVLRLELPGVKKHEVKLEIEDNGGLCISTEIRAEKEEISDIWRRVERS 147
           NA++D++ET +AHV + ++PG+KK EVK+E+ED   L IS E  +E EE SD W RVERS
Sbjct: 48  NAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERS 107

Query: 148 SGRFYRRVVLPESADVDKVKAEMNNGILTVTVPKHHFKKPIARIVQISG 197
           SG+F RR  LPE+A V++VKA M NG+L+VTVPK    KP  + V ISG
Sbjct: 108 SGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Csor.00g246890 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 121.7 bits (304), Expect = 6.6e-28
Identity = 70/146 (47.95%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 61  NSYDQFHEK--DALAGPFRTSMA-SNSSA-------MNAQIDFKETADAHVLRLELPGVK 120
           N +D F +   D   G F  S A +N+S         NA++D+KET +AHV + +LPG+K
Sbjct: 14  NVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLK 73

Query: 121 KHEVKLEIEDNGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEM 180
           K EVK+E+ED   L IS E   E EE +D W RVER+SG+F RR  LPE+A +++VKA M
Sbjct: 74  KEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATM 133

Query: 181 NNGILTVTVPKHHFKKPIARIVQISG 197
            NG+LTV VPK   KKP  + + ISG
Sbjct: 134 ENGVLTVVVPKAPEKKPQVKSIDISG 159

The following BLAST results are available for this feature:

BLAST of Csor.00g246890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P02519	2.4e-30	54.47	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
P04793	5.2e-30	54.92	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]
Q943E7	8.9e-30	48.63	16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
P04794	8.9e-30	52.46	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=...	[more]
P12810	1.5e-29	46.67	16.9 kDa class I heat shock protein 1 OS=Triticum aestivum OX=4565 GN=hsp16.9A P...	[more]

BLAST of Csor.00g246890 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596377.1	2.83e-138	100.00	17.3 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
KAG7027926.1	2.50e-137	100.00	17.3 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022941841.1	3.86e-136	97.97	18.1 kDa class I heat shock protein-like [Cucurbita moschata]	[more]
XP_023539337.1	3.17e-135	97.97	18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971336.1	5.05e-132	96.45	17.3 kDa class I heat shock protein-like [Cucurbita maxima]	[more]

BLAST of Csor.00g246890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FM77	1.87e-136	97.97	18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I321	2.45e-132	96.45	17.3 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
H6TB36	3.54e-99	74.24	HSP22.8 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1F916	2.24e-96	73.10	18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1CWJ7	9.22e-90	65.09	16.9 kDa class I heat shock protein 3-like OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Csor.00g246890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29500.1	7.0e-30	55.26	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	4.5e-29	54.03	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	7.8e-29	55.08	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.7e-28	55.96	heat shock protein 17.4	[more]
AT5G59720.1	6.6e-28	47.95	heat shock protein 18.2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 92..195 e-value: 1.4E-22 score: 79.7
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 82..197 score: 24.877001
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 54..196 e-value: 5.0E-36 score: 125.6
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 66..195
None	No IPR available	PANTHER	PTHR11527:SF305	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 63..196
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 90..181 e-value: 2.06825E-38 score: 125.88
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 63..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g246890.m01	Csor.00g246890.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding