Csor.00g246520 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g246520
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr19: 11244274 .. 11251278 (+)
RNA-Seq ExpressionCsor.00g246520
SyntenyCsor.00g246520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAAAATGATCATCAACATAAATATAATGCAAGTGAGAAAAATGGAAGCTTTGTACCCAAAAACCAGGGACAAGGCCAGAATGTGGGTGAGATGGAGGAGTGATTAACGGTGGACATTGGGTGGGAATGAATGTAATATACATATATTTTAGAGCATAAGATGAAAAGATAGCATTTTTGTTGTTGTTGGCCACTAGAAATATGCTCTTGGGTTTGTGTGGATGTGTAGGGACGGGGTTTGGTCCTTTGGAAATTCCTTGTTTTTTTTTTTCTTTTTGAAGGACATTTTAAGTTGGGTTTTAAATGGTACTTTACTCTCTCTCTAGTTCATACTCTAAACATGCTTCTTTCCACTTTTTCCTTTCATTTTCAACCTTCTTTCCAATTTTTACAAAATAATGGAAATCATACATTTGGTGGGTCATTATTGTCACATATATATATATATGTCTCCCTTTCATCTACTTTTTCACATACTTTTATTAAAGTTTTTAATAATTAATTTAGACAAGGTTTTTAAGTTGTCGTGAGATCCCACATCAATTAAAGAGAGGGACAAGTGCTAGTAAAGACGCTGAATCTCGAAGTGGGGTAAATTATAAGTATTGAGAGGAACTGAGGATTGACTCTCACTTCTACCCTTTTCTTTCGAGTTCAATGTATTTATTAAGTCTAATTTAACTCACAAGGGTTAGGTTTCCAATAAATATGGGTTATATATTTTAAAAATGGAATTATTAAAGTAATCATTGAAACTAAAATTCAAGGGCCGGCCCGGATCATAACTAGACGAAGGGCCTAGAGACTGGAGATTTGAGCGGCCCAATAGTCCAAAATCTTAGGCCCATGACATTGAAACGGGCCAAGCCCCACAATGATTTGCCAAAACACGTGGCTTGAGATTATTGATACGATCCTTATGATACATCTGCCCCTGTAGAATATACTTGAGAATACGGCCATGGCGATGATACACTTCGATCTCAGTTGCTCGTGCCGGCCACCCGAGACCGCCGCCTTTTCTCACCGTTTCTCTCTTTGATATCTCTTCTTTTTCCGACAGCTCCAACTTCAAGGGGAGTTCAGTTGGCTTCGAGTTTGAGCTTTGAACTCAGAGCATCAAACAAGTAGCTCAACGAACAGCCGCATGTAATTGCCACAAAGCACACACCAATTTGCGGAGAAAGAAGACAGAGAGCGGAAGCAATGTCCGTACTTATTGTAACCAGTCTAGGAGACATTGTGATCGACCTACACACCGACATGTGCCCCTTGACCTCCAAGAATTTCTTGAAGCTCTGTAAGTGAGTCAGTTCTTCCATTTTCTCTGTTCTAACTATTAGTTTTGCTGCCTGAATTTGGTTCAGAGTAAGCGTATCGTCTTTTTTTCTAACTCTTTCCTTAATCCGCTTTCATCCACGAGCAGCAATAGTTTTCGTAATTCAGGCTCTGAAATTTTCTATTTACCGGGCGGAAATGTTCATTTTCGCGGCTAATTTGTTTACTGTTGAACACTGTCATAAGCCCTATTCTCTCAGACCTATTCTCAAGGTCTTTTTAGGCGTGTTAGTTTATCTTTAGGTTTAGCAGAAGGCTATATAATGATTCTTTCTGCCCTTGAAATCATCAAGTTTTGAGTGTCATATTGTAGGTTTTGAGTAACTTTGGTGTTGTGAGTACATTTGTTCCGCTTTCGGCTCACAACATTTACTTGATGTGAAGAATTCAGCTTGATGGTTTCCATGTCCTAGTTTTAATTCCATGTCATTTTTCACCTGGCTGATGCAGAGTTAAATTCTACAACACATTATACAGAAGGACTTTACTTCTCAGACTGGTGACCCCGCTGACACTGGGACTGGTGGCGACTCAATCTATAAGTGAGTGCTTTCTTTCACGAGATTCTGATCTTACACGCTCAATTAATGTTCTGGCTCGGAATAATCAATTTTGAACTTGACGGCATCTCATGCTATCATTCTCATGTTAGAGACTGGTTGAAACTGGTAGTACACTGTTTTGGATTCGATGGATGATAGCTTATTTTTGTAAAATGTAAGTATTGTTTCATGTTAAAATTGTCTCAATTTGAACAGAATCAAGTGTACTTATATACTGGATGATCCATTTGATGATCCGCCCCAGTTAGCTGAGCTAATTCCAGGTTCTTCCCCCGAAGGAACCAAAAGATGAGGTAGGTATTATTTGTGGTAATCTATATATTTTAGAAGGTATAAAGACACTGAGAAAGTAATTTATCGGATTTCCCCTTCTTCCATCATTCCATCAAATATTCTGTTTTTTTTTTTTTAAGCTGATACTCTGGATCAAATACCCATGGACTCATAAGCAAGCTTCATCATTCCTATTCCTATATTCCTATCTATTATTCCTATATTCCTATCTATTACTGTAATAGCTCAAGCCCAGCGCTAGCAGATATTGTTCGTTTTGGCTCGTTGCTTACCACTAGCCTCCTAATGTTAAAACGTGTACGCTAGGGAGAGGTTTCCACACCGTTATAAGGAATACTTTGTGTCTAGTGTTTGACTCAGATACCATTTGTAACAACCCAATCCCACTGCTAACATATATTGTCCTCTTCGGGCTTTCCCTTTTGGGTTTCCCCTCAAAGTTTTAAAACGCGTATGTTAAGGAGAGGTTTCCACACCCTTATAAGAAAATTTTCGAGGTTTCCACACCCTTATAAGAAATTTTTCGAGGTTTCCACACCCTTATAAGAAATTTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCAAAATCCACTCCCCTGGGGGGCTCAGTGTTCTCGCTAGCACACCGCTCGGTGTCTGGCTTTATTACCATTTCTTGATTTGTGTGTGTCATCCTTGCGCAGGGGCTATGCTAATCTTCTCTGTACCAGAGCCATACCCTTAACTTAACCATGTCAATTGAATCTCAAGTGTCGAACAAAGAAGTTGTGAGCCTTGAACTCAATTTTCTAACAAAGGATGTACTTTGTTCGAGGGCTCTAGAGGAGTCGAGCTTTGATTAAAGGGAGGCTATTCGAGGGCTTCATAGGCCTAAAGGGAGGGTATATGGTGTACTTTGTTCGAGAGGAGGATTGTTGGGAGGGAGTCCCACCGTGACTAATTAAAAGGATGATCATGGGTTTATAAATAAGGAGTACATCTCTATTGGTATGAGGCCTTTTGGGGAAACAAAAAGTAAAGTCATAAGAGCTTATGCTCAAAGTGGACAATATCATATCATTATGGACAATAACAGCTTGAGGTCACCGCTAGCAGATATTGTCCTTTTTGGGGTTTCCCTTCTAGACTTTCCTTTAGGGTTTTAAAATGCCTCTACTAGGGAGAGGTTTCCACGCCCTTATAACAAATGCTTTGTTCCCCTCTCCAATCAATGTGGGATCTCACAATCCACCCCCATTGGGGGCCTAGCGTCCTCGCTGGCACACCATCCAGTGTCTGGCTCTGATACCATTTGTAACAATCAAAACCCACCGCTAGCAGATATTGTCCGCTTTGGCCCATTACGTATCGCCGTCAACCTCACGGTTTTAAAACGCGTCTGCTAGGGAGAGGTTCTACACTCTTCTAAGAAATGCTTCGTTTCCCTCTCCAATTGATCTAGGATCTCACAATTACTCTTTTAATGTTTTAAAAGAAATGATGGTATCTAACTCGTTAATAGAAGTTTATTCAGAAGTATGGGGTCCTGAAGATGCAATTATTTTGGGAGTTGTTCTTATTGGTGATACATATATTTTGAACTAAAGTTGGCAACTTTAAATCTGTGAAACTTTGGGGGAATTGTTTTTCTTCGGCAGGTTTTATCTGAAACAAGGCTTCTACATTCTAATTTAGTCCAGTTCCGCCAAATTGACGTCTTTTCTCAGGAACTTACAAGGTATCGACGTCTTTTCTTGAGATGCATAAAATGCCTAATTATGCTTTGGTCATATGGGAATTACAACTCTAATTTAGGTCTCATGGTTATGCGAGCATAACAATGTGGAAAAACTAAGGGGATCATAGCTGTGGAACAGAGGGCAATTATCATATTGAGACCAAGTTTGTGGATGATGGTCAATTGTCATATTGAGACCAAGTTTTTCCATTTATCTTGGACTTGTTCGTAACTTTTCCATTCAGTGACAATCAAGTGCCCAACTTGTCTTTCTTGTTCAAGTTTATTTCCATAATTCTTAAATCCAACTTATTTTATTGTAATTACCATAGTATATGCGGAGTAGGCTATGAAAACTTCATTTCCAGCATGGTTTGGTGTTCATTTCTTCAATCTGAACTAAAAACTTCAGCTGATTCAATCTTATCTTGTCGTGCAATGTTTGAGACGAAAAGGGCATGTGAACAAGCATATTTTAAGGTGTGTTAAAAAAATGAATTGTTGTTGGCCCGTTCCCTCACTGCCATTGTTTAAAAGACATGTCTTATAATCTTCTTTATTCTTGTGTCTGATTTTTGTTATTTTTTTGTTTATGGAAGATGGACAATGCGCTGATTGATGATAGTAGGCATGAAGCGAAAAAAAGTAGGTAAATAGTAGAAGGAGAATTACAGATGATAGTCAAGAATATAGGAAGGATGGAAGAGGTTATGGACAAAGAAATTTGGACGGTAAAAAGCACAGATGAAAGATAGGGGATGAGCTATTTAGATTGAAAGAGTTGTAGATGACTGTTAAACTAACTCCAGTAGATGGAATGTCACAAGGGCTGAAGTCACTTCATGGTGGCCTTCTAGGGTACGATGCTACACATAGGAGTGCTGCCTTCATTGGTGGTGGTAGAGGGAGAAGCTACAAAGCACTCTAAATAAATAGGTAATCAATTTTAGAAGTTCCAAATCATAAAGTCAAAAATTACGAACATCACCACTGTAGGGGTCATCAGAAAAATACAGCCATTTGGGCTAGAGCTAGAATCTACAATTGGTCCATTTCAAACAGTTGTTAAATATCTGAAAAAGGTTGTTCAGCATTCCGATTCATATAAATGATGAATGAAGAAGAAACTTTTCTCTTACGGGTTTATAAAGAGCATCATATTAGATCTCCAATTTAGTCGTAGGAAAAAGATGGTGCTGTGTTTATGGGCGAACGCCAGGCTTAAAACTAATGCCTGTTTGTTGATTTGCTATTCCGTTTCCAAATGTTTAGTCATGGCTCTAGTGTCTTTGTATTATATTTTTCTTTTTAAATTGTGAGATCCACGTCAATTGGAGAGAGGAATGAGTGCCAGCGAGGACGCTGGACTCTGGAGGAGGGTGGATTGTGGATCCCACTTCGGTTTGAGAGAGAAACGAAACATTCTTTATGAGGGTGTGGAAACCTCTCTCTAACAAATTCGTTTTAAAAACTTTGAGAGGAAGTCCAGAAGGAAAAGCCCACCGAAGACAATATCTGCTAGCGGTGGGCTTGAGTTGTTACATAGACCTTTCACACCCGTTTGATAGATGAAGAAGAACATGTAATTAAATAAGATTGATCTTATTTCGTTTTGTTCCCACCACTCACTCGTCGAATGTTCAGCTTCATCACTACTTACCGTTCATCAATTGAAGCACTATTGTTCGAATCAGGAGGCCATCTGTAAATGAAAGTGTTTCTTTACACTTCTTCGACATCATCTTAAATTGATTATCTTTGGCAGAAGAAGCCGAAGTTTGTCATGTTTGCTTGTAAGATAATGGCATCCTTGCTCTAGCACCCGACAAAGATCGTGGCGAACCCGATCTTATCGGTGTTTTCAGAATGTGCTTTTTTGACCTTAAAGCTGGCACGCTTGCCTCAATGTTAGAGAGGAAACAATGCAGGCAGTGCAAGACTTGTCCTTGGTACGTACGCGCCTCTGTATTCTTCTTACTGTACCATCCGTCAAGTAAAATGTGTCGAGTCTTCTAGAACATGAAGCATTGCCATACATAAATGAAATGTGTAATTTCTATCCATGGTTTATTTTTCTAGTATTTACCACACCCAAATACCAGAAATTTGAAAATACTTCTGAACTTAACATATAAATGAGATGAAGACATCCAGTATATAAGTTCATGTCCTTGTCTAATCTAGATTCTACCTTTTCAAATATTTTAATTTCACCCAACTTGCTACCATTTTAAATGGTTGAATTGTCACATCAAAGTTGGTGAATTGAGCTTTCTCCTGCCAACTCTTTGATTGATTAGTATTAATGCTTTCCCCCTCCCTGCATTTGAAACAAGCATGCCTGTTATTTCATATAGTTTATTACTTGAACCTAAAAGTCTCATAAGTTGGGTTGATTATCATTAAGCCTGCAATCACATTATAAAATTTATGATTAACCCAAAGATTATTTCCTGAGGTACTTAATTATCATTGAATCAGGGCTGAACTCATAAATATTTGTAAGAAAAATGATGTCTTGACAGGTGGCCGAAGTATATACACGACAGCTCTCCAAACAGTTAGATGATACACGAAGAACATGTATATGAGAAACGTGTGTGTACTAGTCGACTTCTCATTTAAGACCAATTTCACCAACTGCTACCTGCTGCCTATATTGAGTTCTGAACAGAAATAACTCCACCAATAATTGCATCAACCCTCTTGGCTTTGGCTTTGTCTTTGGCTTTGGCATATATATGTTGAACATTGTTTGTGTGGCAGTCTTAAAGCTTTCCATATTTAACAAAGTTTGAAACAGAAGGATCGAAGAGAAGAAAAAGGCAGCTAAGGGCCATGCAGTTGTTGTCATTGGTTGCATATTACATATTTTTCAATGCTTCGAAGGTTGCTTATTGTGTAGTCTTGGTGCTCCTTGTAGCTTTTAATCTCATCATACTCGCGGATAATATGCGACATTTGGAGACGCTTGGAGCTCTGATTTGCAAGGATGAGGTTCAAAATTGTGTGTTTTTCCGGTTTGAAGCCTCTCACGATCAATCTCTTCACTACTACAGCCTCAACTACAATGCTTCTGTTTGTTAA

mRNA sequence

ATGACCAAAATGATCATCAACATAAATATAATGCAAGTGAGAAAAATGGAAGCTTTGTACCCAAAAACCAGGGACAAGGCCAGAATGTGGAGCATCAAACAAGTAGCTCAACGAACAGCCGCATGTAATTGCCACAAAGCACACACCAATTTGCGGAGAAAGAAGACAGAGAGCGGAAGCAATGTCCGTACTTATTGTAACCAGTCTAGGAGACATTGTGATCGACCTACACACCGACATGTGCCCCTTGACCTCCAAGAATTTCTTGAAGCTCTAGTTAAATTCTACAACACATTATACAGAAGGACTTTACTTCTCAGACTGGTGACCCCGCTGACACTGGGACTGGTGGCGACTCAATCTATAAAAGAAGCCGAAGTTTGTCATGTTTGCTTCTGGCACGCTTGCCTCAATGTTAGAGAGGAAACAATGCAGGCAGTGCAAGACTTGTCCTTGGTGGCCGAAGTATATACACGACAGCTCTCCAAACAGTTAGATGATACACGAAGAACATTCTTGGTGCTCCTTGTAGCTTTTAATCTCATCATACTCGCGGATAATATGCGACATTTGGAGACGCTTGGAGCTCTGATTTGCAAGGATGAGGTTCAAAATTGTGTGTTTTTCCGGTTTGAAGCCTCTCACGATCAATCTCTTCACTACTACAGCCTCAACTACAATGCTTCTGTTTGTTAA

Coding sequence (CDS)

ATGACCAAAATGATCATCAACATAAATATAATGCAAGTGAGAAAAATGGAAGCTTTGTACCCAAAAACCAGGGACAAGGCCAGAATGTGGAGCATCAAACAAGTAGCTCAACGAACAGCCGCATGTAATTGCCACAAAGCACACACCAATTTGCGGAGAAAGAAGACAGAGAGCGGAAGCAATGTCCGTACTTATTGTAACCAGTCTAGGAGACATTGTGATCGACCTACACACCGACATGTGCCCCTTGACCTCCAAGAATTTCTTGAAGCTCTAGTTAAATTCTACAACACATTATACAGAAGGACTTTACTTCTCAGACTGGTGACCCCGCTGACACTGGGACTGGTGGCGACTCAATCTATAAAAGAAGCCGAAGTTTGTCATGTTTGCTTCTGGCACGCTTGCCTCAATGTTAGAGAGGAAACAATGCAGGCAGTGCAAGACTTGTCCTTGGTGGCCGAAGTATATACACGACAGCTCTCCAAACAGTTAGATGATACACGAAGAACATTCTTGGTGCTCCTTGTAGCTTTTAATCTCATCATACTCGCGGATAATATGCGACATTTGGAGACGCTTGGAGCTCTGATTTGCAAGGATGAGGTTCAAAATTGTGTGTTTTTCCGGTTTGAAGCCTCTCACGATCAATCTCTTCACTACTACAGCCTCAACTACAATGCTTCTGTTTGTTAA

Protein sequence

MTKMIININIMQVRKMEALYPKTRDKARMWSIKQVAQRTAACNCHKAHTNLRRKKTESGSNVRTYCNQSRRHCDRPTHRHVPLDLQEFLEALVKFYNTLYRRTLLLRLVTPLTLGLVATQSIKEAEVCHVCFWHACLNVREETMQAVQDLSLVAEVYTRQLSKQLDDTRRTFLVLLVAFNLIILADNMRHLETLGALICKDEVQNCVFFRFEASHDQSLHYYSLNYNASVC
Homology
[Close]
BLAST of Csor.00g246520 vs. NCBI nr
Match: KAG6572461.1 (Peptidyl-prolyl cis-trans isomerase CYP59, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 457 bits (1177), Expect = 2.67e-162
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 

Query: 1   MTKMIININIMQVRKMEALYPKTRDKARMWSIKQVAQRTAACNCHKAHTNLRRKKTESGS 60
           MTKMIININIMQVRKMEALYPKTRDKARMWSIKQVAQRTAACNCHKAHTNLRRKKTESGS
Sbjct: 1   MTKMIININIMQVRKMEALYPKTRDKARMWSIKQVAQRTAACNCHKAHTNLRRKKTESGS 60

Query: 61  NVRTYCNQSRRHCDRPTHRHVPLDLQEFLEALVKFYNTLYRRTLLLRLVTPLTLGLVATQ 120
           NVRTYCNQSRRHCDRPTHRHVPLDLQEFLEALVKFYNTLYRRTLLLRLVTPLTLGLVATQ
Sbjct: 61  NVRTYCNQSRRHCDRPTHRHVPLDLQEFLEALVKFYNTLYRRTLLLRLVTPLTLGLVATQ 120

Query: 121 SIKEAEVCHVCFWHACLNVREETMQAVQDLSLVAEVYTRQLSKQLDDTRRTFLVLLVAFN 180
           SIKEAEVCHVCFWHACLNVREETMQAVQDLSLVAEVYTRQLSKQLDDTRRTFLVLLVAFN
Sbjct: 121 SIKEAEVCHVCFWHACLNVREETMQAVQDLSLVAEVYTRQLSKQLDDTRRTFLVLLVAFN 180

Query: 181 LIILADNMRHLETLGALICKDEVQNCVFFRFEASHDQSLHYYSLNYNASVC 231
           LIILADNMRHLETLGALICKDEVQNCVFFRFEASHDQSLHYYSLNYNASVC
Sbjct: 181 LIILADNMRHLETLGALICKDEVQNCVFFRFEASHDQSLHYYSLNYNASVC 231

[Close]
BLAST of Csor.00g246520 vs. NCBI nr
Match: KAG7012061.1 (hypothetical protein SDJN02_26969 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127 bits (319), Expect = 4.29e-34
Identity = 70/88 (79.55%), Postives = 70/88 (79.55%), Query Frame = 0 

Query: 144 MQAVQDLSLVAEVYTRQLSKQLDDTRRTFLVLLVAFNLIILADNMRHLETLGALICKDEV 203
           MQAVQDLSLVA                  LVLLVAFNLIILADNMRHLETLGALICKDEV
Sbjct: 1   MQAVQDLSLVAYCVV--------------LVLLVAFNLIILADNMRHLETLGALICKDEV 60

Query: 204 QNCVFFRFEASHDQSLHYYSLNYNASVC 231
           QNCVFFRFEASHDQSLHYYSLNYNASVC
Sbjct: 61  QNCVFFRFEASHDQSLHYYSLNYNASVC 74

The following BLAST results are available for this feature:
BLAST of Csor.00g246520 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g246520 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6572461.12.67e-162100.00Peptidyl-prolyl cis-trans isomerase CYP59, partial [Cucurbita argyrosperma subsp... [more]
KAG7012061.14.29e-3479.55hypothetical protein SDJN02_26969 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Csor.00g246520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g246520 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g246520.m02Csor.00g246520.m02mRNA