Csor.00g246210 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g246210
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 8923797 .. 8924165 (+)
RNA-Seq ExpressionCsor.00g246210
SyntenyCsor.00g246210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCATGTACCGATTCTATGGGATCAAACCCAGAATCTCAGCGACTTATCTATTGGGTTATCGACGACTCTACTGAGGATTTATCTGCGCTCTAAAATGGTTTATGGGTCATGGGTCATGTATCGACTTTGCTGGGGATCAAACCCAGAGTCTCTGGTTTCGGCAGTTCTCGTATGTGCCTCTGCTCTAAAATGCTTTATGGGTCATGTACCGATTCTATGGGATCAAACCCAGAATCTCAGCGACTTATCTATTGGGTTATCGACGACTCTACTGAGGATTTATCTGCGCTCTAAAATGGTTTATGGGTCATGGGTCATGTATCGACTTTGCTGGGGATCAAACCCAGAGTCTCTGGTTTCGTAG

mRNA sequence

ATGGGTCATGTACCGATTCTATGGGATCAAACCCAGAATCTCAGCGACTTATCTATTGGGTTATCGACGACTCTACTGAGGATTTATCTGCGCTCTAAAATGGTTTATGGGTCATGGGTCATGTATCGACTTTGCTGGGGATCAAACCCAGAGTCTCTGGTTTCGGCAGTTCTCGTATGTGCCTCTGCTCTAAAATGCTTTATGGGTCATGTACCGATTCTATGGGATCAAACCCAGAATCTCAGCGACTTATCTATTGGGTTATCGACGACTCTACTGAGGATTTATCTGCGCTCTAAAATGGTTTATGGGTCATGGGTCATGTATCGACTTTGCTGGGGATCAAACCCAGAGTCTCTGGTTTCGTAG

Coding sequence (CDS)

ATGGGTCATGTACCGATTCTATGGGATCAAACCCAGAATCTCAGCGACTTATCTATTGGGTTATCGACGACTCTACTGAGGATTTATCTGCGCTCTAAAATGGTTTATGGGTCATGGGTCATGTATCGACTTTGCTGGGGATCAAACCCAGAGTCTCTGGTTTCGGCAGTTCTCGTATGTGCCTCTGCTCTAAAATGCTTTATGGGTCATGTACCGATTCTATGGGATCAAACCCAGAATCTCAGCGACTTATCTATTGGGTTATCGACGACTCTACTGAGGATTTATCTGCGCTCTAAAATGGTTTATGGGTCATGGGTCATGTATCGACTTTGCTGGGGATCAAACCCAGAGTCTCTGGTTTCGTAG

Protein sequence

MGHVPILWDQTQNLSDLSIGLSTTLLRIYLRSKMVYGSWVMYRLCWGSNPESLVSAVLVCASALKCFMGHVPILWDQTQNLSDLSIGLSTTLLRIYLRSKMVYGSWVMYRLCWGSNPESLVS
Homology
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BLAST of Csor.00g246210 vs. NCBI nr
Match: KAG6581664.1 (hypothetical protein SDJN03_21666, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254 bits (648), Expect = 3.19e-85
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MGHVPILWDQTQNLSDLSIGLSTTLLRIYLRSKMVYGSWVMYRLCWGSNPESLVSAVLVC 60
           MGHVPILWDQTQNLSDLSIGLSTTLLRIYLRSKMVYGSWVMYRLCWGSNPESLVSAVLVC
Sbjct: 1   MGHVPILWDQTQNLSDLSIGLSTTLLRIYLRSKMVYGSWVMYRLCWGSNPESLVSAVLVC 60

Query: 61  ASALKCFMGHVPILWDQTQNLSDLSIGLSTTLLRIYLRSKMVYGSWVMYRLCWGSNPESL 120
           ASALKCFMGHVPILWDQTQNLSDLSIGLSTTLLRIYLRSKMVYGSWVMYRLCWGSNPESL
Sbjct: 61  ASALKCFMGHVPILWDQTQNLSDLSIGLSTTLLRIYLRSKMVYGSWVMYRLCWGSNPESL 120

Query: 121 VS 122
           VS
Sbjct: 121 VS 122

The following BLAST results are available for this feature:
BLAST of Csor.00g246210 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g246210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581664.13.19e-85100.00hypothetical protein SDJN03_21666, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g246210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g246210 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g246210.m01Csor.00g246210.m01mRNA