Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGCAATCAATCTTCGTTTTCCTCGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
mRNA sequence
ATGTTCGCAATCAATCTTCGTTTTCCTCGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
Coding sequence (CDS)
ATGTTCGCAATCAATCTTCGTTTTCCTCGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
Protein sequence
MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Homology
BLAST of Csor.00g244920 vs. NCBI nr
Match:
KAG6576890.1 (hypothetical protein SDJN03_24464, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 321 bits (822), Expect = 1.72e-110
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI
Sbjct: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
Query: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF
Sbjct: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
Query: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
BLAST of Csor.00g244920 vs. NCBI nr
Match:
KAG7014917.1 (hypothetical protein SDJN02_22548, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 321 bits (822), Expect = 1.78e-110
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI
Sbjct: 2 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 61
Query: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF
Sbjct: 62 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 121
Query: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 122 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of Csor.00g244920 vs. NCBI nr
Match:
XP_022922671.1 (uncharacterized protein LOC111430603 [Cucurbita moschata])
HSP 1 Score: 318 bits (816), Expect = 1.47e-109
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
Query: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
MFAINLRFP VHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI
Sbjct: 2 MFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 61
Query: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF
Sbjct: 62 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 121
Query: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 122 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of Csor.00g244920 vs. NCBI nr
Match:
XP_023551996.1 (uncharacterized protein LOC111809798 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 318 bits (815), Expect = 2.08e-109
Identity = 158/161 (98.14%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI
Sbjct: 2 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 61
Query: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTL+KEFVSEWGFNF
Sbjct: 62 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLVKEFVSEWGFNF 121
Query: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKK++GL
Sbjct: 122 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKTMGL 162
BLAST of Csor.00g244920 vs. NCBI nr
Match:
XP_022984827.1 (uncharacterized protein LOC111482994 [Cucurbita maxima])
HSP 1 Score: 310 bits (794), Expect = 3.32e-106
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 0
Query: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
+FAINLRFPRVHGQIHNFQFQSWPS ALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI
Sbjct: 2 IFAINLRFPRVHGQIHNFQFQSWPSSALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 61
Query: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
NTNLIQGEEAMTKSREILFT+LCGFL LKSEETKRCWKKMDEEAKLTL+KEFVSEWGFNF
Sbjct: 62 NTNLIQGEEAMTKSREILFTDLCGFLELKSEETKRCWKKMDEEAKLTLVKEFVSEWGFNF 121
Query: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
QPLSPRS KEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 122 QPLSPRSVKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of Csor.00g244920 vs. ExPASy TrEMBL
Match:
A0A6J1E4R4 (uncharacterized protein LOC111430603 OS=Cucurbita moschata OX=3662 GN=LOC111430603 PE=4 SV=1)
HSP 1 Score: 318 bits (816), Expect = 7.10e-110
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
Query: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
MFAINLRFP VHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI
Sbjct: 2 MFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 61
Query: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF
Sbjct: 62 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 121
Query: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 122 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of Csor.00g244920 vs. ExPASy TrEMBL
Match:
A0A6J1J388 (uncharacterized protein LOC111482994 OS=Cucurbita maxima OX=3661 GN=LOC111482994 PE=4 SV=1)
HSP 1 Score: 310 bits (794), Expect = 1.61e-106
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 0
Query: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
+FAINLRFPRVHGQIHNFQFQSWPS ALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI
Sbjct: 2 IFAINLRFPRVHGQIHNFQFQSWPSSALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 61
Query: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
NTNLIQGEEAMTKSREILFT+LCGFL LKSEETKRCWKKMDEEAKLTL+KEFVSEWGFNF
Sbjct: 62 NTNLIQGEEAMTKSREILFTDLCGFLELKSEETKRCWKKMDEEAKLTLVKEFVSEWGFNF 121
Query: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
QPLSPRS KEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 122 QPLSPRSVKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of Csor.00g244920 vs. ExPASy TrEMBL
Match:
A0A6J1D577 (uncharacterized protein LOC111017712 OS=Momordica charantia OX=3673 GN=LOC111017712 PE=4 SV=1)
HSP 1 Score: 238 bits (606), Expect = 7.25e-78
Identity = 124/162 (76.54%), Postives = 140/162 (86.42%), Query Frame = 0
Query: 1 MFAINL-RFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
+FAINL R P +IH+F+FQS PSPALSR+RLPCQI+YC KK SDA+LASDLA EVAK
Sbjct: 2 IFAINLFRLPHGRSEIHSFRFQSPPSPALSRNRLPCQISYCIKKLSDAELASDLATEVAK 61
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
++TNLIQ EEAM KS+E LFTELCGFLGLKSEETK+ WKKMDEEAKL L+KEFV+EWGFN
Sbjct: 62 MSTNLIQREEAMKKSKEFLFTELCGFLGLKSEETKKSWKKMDEEAKLALVKEFVTEWGFN 121
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
FQPLSPRS KE+VEEYV NGEN AISSA SLI SLK+ +GL
Sbjct: 122 FQPLSPRSVKELVEEYV-NGENISAISSAPSLIPSLKRIMGL 162
BLAST of Csor.00g244920 vs. ExPASy TrEMBL
Match:
A0A0A0KYF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179140 PE=4 SV=1)
HSP 1 Score: 228 bits (580), Expect = 5.41e-74
Identity = 124/159 (77.99%), Postives = 132/159 (83.02%), Query Frame = 0
Query: 3 AINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINT 62
AINLR P IH+F+FQ PSP LSR+R+P QITYCRKK SDADLASDLA EVAKINT
Sbjct: 4 AINLRLP-----IHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAKINT 63
Query: 63 NLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNFQP 122
NLIQ EEAM KSRE LFTELC FLGLKSEETKR W KM+EEAKL L+KEFVSEWGFNFQP
Sbjct: 64 NLIQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFNFQP 123
Query: 123 LSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
LS R KEMVEEYV NGEN ISSASS ISSLKK++GL
Sbjct: 124 LSGRCVKEMVEEYV-NGENLYGISSASSFISSLKKTMGL 156
BLAST of Csor.00g244920 vs. ExPASy TrEMBL
Match:
A0A1S3BZE3 (LOW QUALITY PROTEIN: uncharacterized protein LOC103494847 OS=Cucumis melo OX=3656 GN=LOC103494847 PE=4 SV=1)
HSP 1 Score: 215 bits (548), Expect = 4.31e-69
Identity = 120/159 (75.47%), Postives = 131/159 (82.39%), Query Frame = 0
Query: 3 AINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINT 62
AINLR PR G+IHNF+FQ PSP L R+R+P QITYCRKK SDADLA DLA EVAKINT
Sbjct: 4 AINLRPPR--GEIHNFRFQPSPSPTLFRNRMPRQITYCRKKLSDADLAFDLATEVAKINT 63
Query: 63 NLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNFQP 122
NLIQ EEAM KSR ++ + FLGLKSEETKR WKKM+EEAKL L+KEFVSEWGFNFQP
Sbjct: 64 NLIQREEAMKKSRAFVYRAV-EFLGLKSEETKRKWKKMEEEAKLRLVKEFVSEWGFNFQP 123
Query: 123 LSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
LS R KEMVEEYV NGEN ISSASSLISSLKK++GL
Sbjct: 124 LSGRCVKEMVEEYV-NGENLYGISSASSLISSLKKTMGL 158
BLAST of Csor.00g244920 vs. TAIR 10
Match:
AT5G64480.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 0
Query: 41 RKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKM 100
+K +D++LA+DLA E+ K NT Q EAM KS EIL+ E C + LK +E K W K+
Sbjct: 57 KKIMTDSELATDLAREIGKANTVAEQRREAMKKSGEILWAEFCRHMDLKEDEMKIKWNKI 116
Query: 101 DEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVE------EYVINGENSPAISSASSLISS 160
EE KL L++EFV EW +FQPLS S KEMV+ + I +S ++SS S L
Sbjct: 117 GEEEKLVLVREFVDEWAGDFQPLSITSVKEMVDQECLDSDKTIESSSSSSMSSFSGLFPG 176
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6576890.1 | 1.72e-110 | 100.00 | hypothetical protein SDJN03_24464, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7014917.1 | 1.78e-110 | 100.00 | hypothetical protein SDJN02_22548, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_022922671.1 | 1.47e-109 | 99.38 | uncharacterized protein LOC111430603 [Cucurbita moschata] | [more] |
| XP_023551996.1 | 2.08e-109 | 98.14 | uncharacterized protein LOC111809798 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022984827.1 | 3.32e-106 | 96.27 | uncharacterized protein LOC111482994 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1E4R4 | 7.10e-110 | 99.38 | uncharacterized protein LOC111430603 OS=Cucurbita moschata OX=3662 GN=LOC1114306... | [more] |
| A0A6J1J388 | 1.61e-106 | 96.27 | uncharacterized protein LOC111482994 OS=Cucurbita maxima OX=3661 GN=LOC111482994... | [more] |
| A0A6J1D577 | 7.25e-78 | 76.54 | uncharacterized protein LOC111017712 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
| A0A0A0KYF6 | 5.41e-74 | 77.99 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179140 PE=4 SV=1 | [more] |
| A0A1S3BZE3 | 4.31e-69 | 75.47 | LOW QUALITY PROTEIN: uncharacterized protein LOC103494847 OS=Cucumis melo OX=365... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G64480.1 | 2.6e-22 | 46.03 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... | [more] |
