Csor.00g244790 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g244790
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTubulin alpha chain
LocationCsor_Chr16: 1469404 .. 1474594 (+)
RNA-Seq ExpressionCsor.00g244790
SyntenyCsor.00g244790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTCTGCAAATTCTTAAATCAACTGTCTCTCCTCCTTCAATTTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTAGGAGGTTTACACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTAGAAGGTTGAGTTTCCGCTGTGCTGCTCAGGATTCTGATAAGGAAAGCAACGGCAAGTTTTGACCGCTCTTCTTCTTCTTCTTCTTCTTTTGTTTCTGCTTCTGCTTTTTGCGGTCTTCTTTTTCTCATTTGTTTTTCTTTCTCAGCGCATTTTCTTGATGATTTGTTGTTCGTTGTTGTAGACTTCGTCTTGTTATATTGAAAGCGAGAGATAGAGAGGCAACTAGTTAACTGGCTTAGATGAGGCAATAGTTACTGATGTGGTTTTATTCCGATAGTCTGTCATTCTTAGTCCTATACTATCTCTCTTTGTAGACAATCGTGTGAGAATCCATCCGGCTATTCGTCCGTCATTCCTGGTTTATCTCTCTCAATGTGTTTGTCTCGCTCGGATTTCTTCATGAATTCATGTTCGTCATCATTGACTTAAGCGAGATAGAGACGGTATGCAGCTTAATCCTTCGATGAGGCCGAAGTTGCATGGTGTAGTTTGCAGCTCAGTTGGTCCGTCGCTTCTGAATTATCTTCTTCTGTTGAAAGTAGCTCAATCACATCGCAAAATCGTGAGAGATGAGATTCATCCAGCTATTCGTTCCTCATTCCTTAATTCTCCTACTCAGTGCATTTGCCTCGTTCGGATGTCTTGATGAAATGATGTTCGTGTTTGTTAGTTATTTTCATAGCGAGAAATAATGACGCAAATGCACAGAGAGAGATAATTCGGGAATGATGAACGAATATTTGGATGAAACTCGCATGATTTTACTCGTTGATTGTGCTGCAGTCAACAGAGTAAGATAGTAGATGTTCACTATCGTAGACATCTTCTTGCTTAAGATAGGCAGAAGTTGTATGTTGTAGTTTGTTGTTGAGATGGTCCGTCATTCCTCAGTTATCTTGCTCTGTAGAAAGTAGCGCAATCCTGTAGCAAAATTGTGCAATATCCATCAAGCTATTTGAGTAAACGAGTGATGGAAAATGGTTGCGGCTGCAAATGAAGATCACTTAGTTGGCCGTCCAATTCTTTTTAGAGCTTTATTCTTGAGTCAATATAGGCATGGCCACGAAGATGAAATTAAATAGGAATTTGAAAATTTGTATTGGTCCAATTTTTATAGTCGAAGCTTTGAAGAAGCTATAAGTCTGTGCCAAGCCAACAGGAGTATTAGCTGGCCATGCTTGTTTAGATTGTTTAGGGCAGATTCTCCATTAAGAAGCGTTTACATTTCGGATGTTTGAGTTTTCTTCAGCTTGTGTAACAATGGCGTGGTTAGCTTTGGCCCTCCAATATGAAGGCTGAGAACGCCTTCAAGCTTATTTTCCTAGCCAGTCGCTTTTGTATGCATCATCTTCCTACTACGTTCACATCTGGCCTTTCCTTTCTTGATCCATTATAGAAGAACTTTTACTTATTAGAGCAAAGCTTTTAGCGTTCATCTGATTAGATGTTCCAACCAAGTTTGTATCTGCGTCACAGTTATCTCTAATAATAGGTCTTAGTGGTAGGAATTTTCACATTCCTCATTAGGAACCTTAGGATTCTCTTTTCTTAACTATTTTCGTATACTTTGTTATGTAAGCCATACGTTCACATGCATATATTTTCTATAAATCAAGTCTGCCACAAGTAGCTTACTAGAAGGCTGTAATTTTTAGTTAGGGACTGGTTAATCACCCTGTTGTAGGTTATGGAAAATGATTTTAGTTTTGAAGGATTCTGTGTGTTTTCCAAGGTTAGAGAAAGTTGCTTTAACTACACCCAAGATCTCCATAGATGCCAGGTACGATAGAAATCTTTTGTCGATCTTATTTGTCATCAAGTTGACCAACCATACTGTGACCTTATTATTCACTGCTTCCCATCCTTCGTAGTTTGGATCAGTCTAACCATTGTAATTAGTTTTCTCCTTTAGTTTGAGAATAGTTGCAACACCTTCAGAAACCATCACTGACGTGTGTGTATGTAGTACATTACTTGAGTTGAACGTATTCAAGAATGTTTTTGTGTTTGATACCTTCGATTATGTCGATTTAAGTTACTTTACATTACTTTCTTCAGGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTTGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTGTGATTTTATTGGAGTATATTGAATATGCTATTCGAATATTTAAATTCATGTTATCTTTTCGTTATCATTTTCTATTGTTCCCATGCTTGACGAGTTATGACCAACATAACCAGAATTTGGTGAGCAGTCGAGGAAAATATTAGTACTATCCCACCAAGAATATCGAAAGACTGGCCAGCCATACCAAAACCGAAGTTCAAATAAGGGATCTGTAAGAAAGAATTACAAAAATTAGCTCCAAACGTTGAGAACCATCCAAAACAAATGGACGACCAAAACTTTTCTGAAGCAAAAGCCTAAAGGGAAGCATTACAGCGGGCCAAGCTTTAGAAATTCTCCCATGACCTCTCTGTCCTAGAAGTCTTTGTGCTTTCTACTAAATACTCCAAATAACAACAACATAATCTGCCGGCAGAAAAACCATGTCGTTGTTACGAAATGGTAGATGAAAAATAATCTCCTCCACACATCACTAAGTAGGTAATCGGAAATGAAAAGCATGCTCCAGGTGACCGAAAATCTTCTTCCAAAATCTTCCCAGAAAACATGCATTCGAAGTAGCTCTTCGGATGAACTTACATGCAAAGATCACACCATTGAAATCAAACCACCGAGGACAATTTTAAATAAATCATGATATTGATTCTCCCACAACCGGCAAAGAGAAGAGTAGAATTTAACCTTCTTCAGAAGCAAGTCCTTCCTAGTTTAGCAAAAATAAATAAATAAATAAAAAACCCAAACACTTGTATCCTAGTGATTAATAGATAAATACAAAACCCCGGTCGATGTTAAGCTCTGTTAAATTAAGTTTTCTTGAAAGTGAAGTTAATGGGACTAAACTGCCCAAAAGAAGAAAAGAATCAACTGAGGAAATTTCTTTGAAGAGGGAGATTATAGAGAGGGAAAATAGACTTTAAAAGACCACCTTCAACTGAATGGCCTTCCTAAAAATAATAATGAAGCCACTCTCAAATGAAAGATTAAACAATATTTAGCATGGGTACAACGAAATAGATTTTGAGTGCTTCCTAAATGTAGATTGTATTTTCTGATATCGATCTTGTACTGCAACATATCAGGCTTTGGTTAATAGAGCAATAGTTGTGAAAGCTAGATTTTCAATGCCCAAACCACCCTCTTTTAGAACAACTCAACAAGATAAGGACCTTCCCCACACCCCCGCGAAAAAAGAGATGAAGTCATTGAGTTTAATGATCAGTGGTTCAAGCTTTGAAGATTTCAGTTAAGAGGAATCCCACTCAAAACCAACTAGATCAGAGCAAGTCTGCCACCCTCGGAGAGAACTTCTTCCATAATAACAGGTGGTTCTCCTCTTTCTAATAGCTCTTCTAGCCCCAAATTTTAGCCTCGTGTATACAACCAATTAGGGTAGAGATATTAACTGAATGCATACAACTATTTATGAAGGCTTAACATAGAACACGCTGAACCAACCTCTTCTGTTAGACCGTTGATATAGTGCCAAAATAAGGGAAGAAGAGTCTTCTCTTCCAGAAAAAGGCACCCTTCACCAACCTTCGCCAAAATGTGGAAAGCAATCTATCAACCAAATAACAATTCCTATCCTTTCTCAAACACAAACTTTCTTTCATCCGTGATTCTCAATTAGAAAGACTTGCTTTCTATTGTAAAGCACCACCAAACATGAAGACAAATCAAAGAAGAAAGTACCAGATCCCTTTTCCAGATCCTAATTAGCAATTCGGTCATTCAACAATCTCCCGTTTTTTCTGTACTTATAGCAGGTTAACAGCATCATGTGCCTGCTATTCTCTCATACATCATTTGTCTTGGTAATTCGTATATGAAGCGTACTAGTAAATTTTTTATAAGTCTAACTTCGACAAGCCAAAACTCATAATTGGAACCAATGATACTGTTAATCTTAGCTAGCAGCATCAGTTTTGGAGTGGTCAATCAGTAGAGAAACACCAACATATCTGAGCGTAAGGTTTAACATAGAAGTCTGCAGTATTTGAGTTCTACATGCACTGGAACTATATTCTATTTTTCCATACAAAGTCCTGGGAAAACTGAAGTTTATTTCTAATTTCGTGCTGGAAGGAACAGAATAAACTTTATCATGCATTTATGTTTTCTGCGTGATCCATTAATTGGATCTTAGTATTATGTTGATATGATTGGCATAGGATTGCCCTAAGAATGATGGTCGGTTGTGTCTGTTTGGTCTTCGAACTTTAACGTTTACAAATTTAGTTCCTGAACTTTAATAATTTTTTGTAATCGACAAATCTACTAAATACAAAATTAAACGGTTAGGATTCCTAACCGGATTGATTATAGTCCGTTCCCTTTCATTTCTATCATTTCAACTGCATATGTCAGCTTTAATTCATTTCATTTGGTTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTTTATACTTTGTAAGGCTCCTTTCTCTTATTACTGCTCCAATTTCTGTTTGATATCCAAGTACTTAAGAGGAGGTCGAAACCGAACATCTTTACTCTAATACTACTTTTATGCAGTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTGTAAATTGA

mRNA sequence

ATGGCTGTTCTGCAAATTCTTAAATCAACTGTCTCTCCTCCTTCAATTTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTAGGAGGTTTACACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTAGAAGGTTGAGTTTCCGCTGTGCTGCTCAGGATTCTGATAAGGAAAGCAACGGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTTGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTGTAAATTGA

Coding sequence (CDS)

ATGGCTGTTCTGCAAATTCTTAAATCAACTGTCTCTCCTCCTTCAATTTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTAGGAGGTTTACACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTAGAAGGTTGAGTTTCCGCTGTGCTGCTCAGGATTCTGATAAGGAAAGCAACGGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTTGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTGTAAATTGA

Protein sequence

MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFRCAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN
Homology
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BLAST of Csor.00g244790 vs. NCBI nr
Match: KAG6576903.1 (hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 431 bits (1109), Expect = 3.12e-152
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]
BLAST of Csor.00g244790 vs. NCBI nr
Match: XP_022922737.1 (uncharacterized protein LOC111430640 [Cucurbita moschata])

HSP 1 Score: 430 bits (1106), Expect = 8.93e-152
Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFFLGPSFVHDGTKTPISPPPYVDPYALLEDER+SQMAPRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERMSQMAPRVN 222

[Close]
BLAST of Csor.00g244790 vs. NCBI nr
Match: XP_022984914.1 (uncharacterized protein LOC111483048 [Cucurbita maxima])

HSP 1 Score: 429 bits (1104), Expect = 1.80e-151
Identity = 221/222 (99.55%), Postives = 221/222 (99.55%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRF LLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]
BLAST of Csor.00g244790 vs. NCBI nr
Match: XP_023552655.1 (uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427 bits (1098), Expect = 1.48e-150
Identity = 220/222 (99.10%), Postives = 220/222 (99.10%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFF ELDSTRRF LLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFLELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]
BLAST of Csor.00g244790 vs. NCBI nr
Match: KAG7014928.1 (hypothetical protein SDJN02_22559, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420 bits (1079), Expect = 2.31e-147
Identity = 222/241 (92.12%), Postives = 222/241 (92.12%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNG-------------------EEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAAQDSDKESNG                   EEPPESLFMKELKKRGITPTSLLEDTSNT
Sbjct: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT
Sbjct: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 222
           FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV
Sbjct: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240

[Close]
BLAST of Csor.00g244790 vs. ExPASy TrEMBL
Match: A0A6J1E457 (uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC111430640 PE=4 SV=1)

HSP 1 Score: 430 bits (1106), Expect = 4.32e-152
Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFFLGPSFVHDGTKTPISPPPYVDPYALLEDER+SQMAPRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERMSQMAPRVN 222

[Close]
BLAST of Csor.00g244790 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1)

HSP 1 Score: 429 bits (1104), Expect = 8.73e-152
Identity = 221/222 (99.55%), Postives = 221/222 (99.55%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRF LLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]
BLAST of Csor.00g244790 vs. ExPASy TrEMBL
Match: A0A6J1D5D9 (uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017763 PE=4 SV=1)

HSP 1 Score: 372 bits (955), Expect = 4.32e-129
Identity = 192/222 (86.49%), Postives = 204/222 (91.89%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQ+LKS VSP SISQP FG +SSRF S+ DSTRRF   HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAAQD+DKESNGEEPPESLFMKELKKRG+TPTSLLED+++ DFGLGGEM GE RDFS RS
Sbjct: 61  CAAQDADKESNGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTGEGRDFSSRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFF GPSFVH+G +TPISPPPYVDPYALLEDERISQ APRVN
Sbjct: 181 YFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRVN 221

[Close]
BLAST of Csor.00g244790 vs. ExPASy TrEMBL
Match: A0A1S3BY38 (uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=4 SV=1)

HSP 1 Score: 363 bits (932), Expect = 1.20e-125
Identity = 190/222 (85.59%), Postives = 202/222 (90.99%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQILKST+S PSIS P FGSQS+RFFS+ DS     LLHGRRRSLR  CV RR SFR
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSL----LLHGRRRSLRVACVCRRFSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N+DFGLGGEM GENRDFSRRS
Sbjct: 61  CAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFF G SF+HDG KTPISPPPYVDPYALLEDERISQ+AP VN
Sbjct: 181 YFFFGSSFIHDG-KTPISPPPYVDPYALLEDERISQIAPPVN 217

[Close]
BLAST of Csor.00g244790 vs. ExPASy TrEMBL
Match: A0A6J1JUF8 (uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 353 bits (906), Expect = 1.31e-121
Identity = 186/222 (83.78%), Postives = 195/222 (87.84%), Query Frame = 0 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQILKSTVS  S SQ  FG QSSRFF+ELDS+RR    HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAALQILKSTVSTLSFSQTSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
           CAAQDS KESNGEEPPESLFMKELKKRGITPTSLLEDT +T+F LGGE  GEN DFS  S
Sbjct: 61  CAAQDSHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEV KSLSNQRERSMQLNSEGLEGLIPRAKLLLT+GGTFFLGFWPLIV+TV+FFFA 
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAF 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222
           YFF G SFVHDGT+TP SPPPYV PYA LEDERISQ+APRVN
Sbjct: 181 YFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 222

[Close]
BLAST of Csor.00g244790 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 199.1 bits (505), Expect = 3.6e-51
Identity = 104/162 (64.20%), Postives = 126/162 (77.78%), Query Frame = 0 

Query: 62  AAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTS-NTDFGLGGEMKGENRDFSRRS 121
           A    D +S GEEPPESLFMKELK+RG+TPTSLL+D   + D    G+  G +   S+ +
Sbjct: 51  ALNGGDNQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTT 110

Query: 122 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 181
           A +   DKSL NQRERS+ LNSEGLEGLIPRA++LLTIGGTFFLGFWPLIV+T+  F AL
Sbjct: 111 ATTPAFDKSLLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSAL 170

Query: 182 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 223
           Y + G  F+HDG++TP+SPPPY+DPYALLEDERIS M PR+N
Sbjct: 171 YLYFGADFIHDGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209

The following BLAST results are available for this feature:
BLAST of Csor.00g244790 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g244790 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6576903.13.12e-152100.00hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022922737.18.93e-15299.55uncharacterized protein LOC111430640 [Cucurbita moschata][more]
XP_022984914.11.80e-15199.55uncharacterized protein LOC111483048 [Cucurbita maxima][more]
XP_023552655.11.48e-15099.10uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo][more]
KAG7014928.12.31e-14792.12hypothetical protein SDJN02_22559, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g244790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E4574.32e-15299.55uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC1114306... [more]
A0A6J1JBV18.73e-15299.55uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048... [more]
A0A6J1D5D94.32e-12986.49uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A1S3BY381.20e-12585.59uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=... [more]
A0A6J1JUF81.31e-12183.78uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Csor.00g244790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50020.13.6e-5164.20unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..133
NoneNo IPR availablePANTHERPTHR35699F2J10.10 PROTEINcoord: 24..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g244790.m01Csor.00g244790.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane