Csor.00g244050 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g244050
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Maternal effect embryo arrest 9
Location	Csor_Chr16: 1834598 .. 1835041 (+)
RNA-Seq Expression	Csor.00g244050
Synteny	Csor.00g244050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACGCGACAAGAATTTCGATCCCTCCACCATTGAAGACCTTATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGAAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCCTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACGCGACAAGAATTTCGATCCCTCCACCATTGAAGACCTTATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGAAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCCTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTACGCGACAAGAATTTCGATCCCTCCACCATTGAAGACCTTATGAAGCTCTTCGAGATCGAAGCCTACAAGTCCTGGGCCGCCAGCGAGCTTCAACTCCAGAACGAGGCTCAAGAAGCTGAGATCGCGATGCAGAAGGCTGAGGATTATCTCGATTCTGTTATGGAAGACGCTATGGATGAGTTCAGAAGGTTCGAGGAGGAGTTCGATCGGATGGCTGAAGCCGAGCTCCAGGAACTCGTGGACAAATCTGAGAAGGCTCGTAAGATGGGTAGTTTGATGGAGAAGGCTGCGGCGGTTGCTTCCAAAAGGTACATGGAGGCGGCTATGAACTCCGCTACCGCTTCCATGAGATCCGCTTGGAAGGCCATTTCGTCCAATAAGGTTCATCCGTCCTGA

Protein sequence

MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQKAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

Homology

[Close]

BLAST of Csor.00g244050 vs. NCBI nr
Match: XP_022922756.1 (uncharacterized protein LOC111430656 [Cucurbita moschata] >KAG6576974.1 hypothetical protein SDJN03_24548, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014993.1 hypothetical protein SDJN02_22624, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264 bits (674), Expect = 2.23e-88
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. NCBI nr
Match: XP_023551868.1 (uncharacterized protein LOC111809710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260 bits (665), Expect = 5.25e-87
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. NCBI nr
Match: XP_022985079.1 (uncharacterized protein LOC111483158 [Cucurbita maxima])

HSP 1 Score: 258 bits (660), Expect = 3.04e-86
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAE ELQELVDKSEKARKMGSLMEKAAA+ASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. NCBI nr
Match: XP_038885707.1 (uncharacterized protein LOC120075975 [Benincasa hispida])

HSP 1 Score: 250 bits (638), Expect = 6.87e-83
Identity = 139/147 (94.56%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAM 
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAMELQHQNEVQDAEIAMH 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQEL+DKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. NCBI nr
Match: XP_004149957.1 (uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hypothetical protein Csa_011667 [Cucumis sativus])

HSP 1 Score: 249 bits (636), Expect = 1.39e-82
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. ExPASy TrEMBL
Match: A0A6J1E4Z9 (uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC111430656 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 1.08e-88
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. ExPASy TrEMBL
Match: A0A6J1JCA1 (uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 1.47e-86
Identity = 143/147 (97.28%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAE ELQELVDKSEKARKMGSLMEKAAA+ASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. ExPASy TrEMBL
Match: A0A0A0LAB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 249 bits (636), Expect = 6.71e-83
Identity = 138/147 (93.88%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. ExPASy TrEMBL
Match: A0A6J1FR93 (uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC111447720 PE=4 SV=1)

HSP 1 Score: 246 bits (629), Expect = 7.83e-82
Identity = 136/147 (92.52%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALISQFTFLSD+AL+DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAMQ
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. ExPASy TrEMBL
Match: A0A5D3BKS0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00220 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 5.28e-80
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALIS FTFLSDQ L DKNFDPSTIEDLMKLFEIE YKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQ+L+DKSEKARKMGSLMEKA +VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g244050 vs. TAIR 10
Match: AT1G60870.1 (maternal effect embryo arrest 9 )

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-39
Identity = 91/147 (61.90%), Postives = 114/147 (77.55%), Query Frame = 0


Query: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60
           MEALI  FT LSDQAL DK FDPS IEDLM+LFE+++YK+WAA E + Q E +EAE +++
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE  LD  ME  M+E+RR  EE +RM  AEL+EL +K+E AR+ G+LMEKAA VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

The following BLAST results are available for this feature:

BLAST of Csor.00g244050 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g244050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922756.1	2.23e-88	100.00	uncharacterized protein LOC111430656 [Cucurbita moschata] >KAG6576974.1 hypothet...	[more]
XP_023551868.1	5.25e-87	98.64	uncharacterized protein LOC111809710 [Cucurbita pepo subsp. pepo]	[more]
XP_022985079.1	3.04e-86	97.28	uncharacterized protein LOC111483158 [Cucurbita maxima]	[more]
XP_038885707.1	6.87e-83	94.56	uncharacterized protein LOC120075975 [Benincasa hispida]	[more]
XP_004149957.1	1.39e-82	93.88	uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hypothetical ...	[more]

BLAST of Csor.00g244050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4Z9	1.08e-88	100.00	uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]
A0A6J1JCA1	1.47e-86	97.28	uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158...	[more]
A0A0A0LAB6	6.71e-83	93.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1	[more]
A0A6J1FR93	7.83e-82	92.52	uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A5D3BKS0	5.28e-80	91.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Csor.00g244050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60870.1	1.6e-39	61.90	maternal effect embryo arrest 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..90
None	No IPR available	PANTHER	PTHR37707	MATERNAL EFFECT EMBRYO ARREST 9	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g244050.m01	Csor.00g244050.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009555	pollen development
cellular_component	GO:0009506	plasmodesma