Csor.00g243930 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g243930
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ferredoxin
Location	Csor_Chr16: 1934247 .. 1936772 (+)
RNA-Seq Expression	Csor.00g243930
Synteny	Csor.00g243930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGTGCACCAGTACTTTCCGGCGCTACAATCAACACCATCCTCCTCCAGAAGCAGCCAGCAACTAGCCTACGATCGGTGTCGAACTTCGGCCAGGGTCTTTTCGGGCTGAAGGACAGCACCCGTTGGTGGGCGATTGGTTGCCAAGGCAGTGTACAGTGTGAAGCTGATCACCCCAGAAGGAGAGAAGGAGTTCATGTGCCCCGACGACGTATACATCCTAGATCAGGCCGAGGAAATAGGAATCGACCTTCCATATTCATGCAGGGCAGGGTCTTGCTCTTCTTGCGCAGGGAAAGTAGTGGGAGGGCAGGTGGAACAGTCGGACGGTAGCTACCTCGACGACGACCAGATTGAAGAAGGTTGGGTTCTAACTTGTGTTGCATACCCTCAATCTAATATTGTCATTCAGACCCACAAGGAGGAAGAGCTTGTGAGTTAGTTAGTCAGTTAGTCAGTTAAATCTGGTATTTAACTCCCTCATTCTCCATGCTCTTTCCTCTCCATCTCCAATAATGTGGGTTGATATATTAGTAAATGGGAGAGTTCGACGTCATGTTAAGACGTTTCCAGTATCTTTTATATACTTATAAAAAAGTTGATCTATTATCGTTCAACTAAATATAAATTTCATTACCAATATCTATACGATTAAAATCTTGATATCGATATTTTAATCCTTGTTTCACGAGTCTTGTTTGTTTCTATTGGTATTTTAATTCCAGTTTCACGAGTTTTATTCGTTCTATTGATATTTTAATCATCTATTTGTAACCACCCATATCACATCATAGCATAAAATCATACCGTATAAATATATCACAAAAATGTTCATTCATCTCTCATCCAATGCAAGGTGTACCTCACAGCTACGAAACATCAGTGATTAAGCCTACTACGTAAGCGATCTATAACCTAGAGCTCACATCAGTGATTGGACTGTGGAACATGTCAAGCCTACTACGTAAGCTAGTCTACAAGATCTATAACCTAGAGCTCTGATACCATTTGTAACGGCCTTGATTCACATAGTATTGTTCAAGCCTACTTCGTAGGCTAGTTGTGAAGCGAGAGGGAATTTAAACCTAGAGCTCTGATATCATTTGTAACGGCCAATATCTGCTAGCGGTGGATCTGGGTCGTTACACTATTAATCTTCAACTAAATAAAACTTAACAATTACACCTTTAGTTTTACTGGTAGTATATCCTTTCTATTGGTTCACGAGCTTCACGAAAGAAAAAAATGTAGGAGGTTCAAATCTCGTGAATTCAAACTTAAGAAGACTCATCCAATTCAACCCTCTACGATTCATTCTGAACCACAACGAAAATAAATGTTTTAATAATTTGACCGATAATAAATGTTTTAATCGAATGGGGTATGGTTAGGTTAACGAACATTATACACGTTTTTAATTTTGGGACTTTCGTGTACGTCTTTATGTGTGTGACTTCCGCACGTGACACGAATAAACTCTTAATACTAGAATATAATTGATGCTCAAGAATGATGGTTATCTCCATCTCGAATCTCTTATCACCGAAATTCAAATATCAACTTTATTCTCTCTTGTTCGAGTTGTCACATCGATTTGCCACATTGATTGAGAAGGAGAATGAAAAATTATTTATAACGATGTGGAAATACGAAAGAAAAAGTCCAAAATAGAACAATATTTACTAGCGATGGACTTCAACGGTTTCGAAAACAGGACTCCAAAAGAAAAGGAGTCGAGCCTACTCGAAAGCATAGTAAAAAATGACTAAGACTCCAAAAGAAAAAGGAGTCGAGCCTCGATTAAGGGGAGGCATGGAGGTGTTGGATGATGAAAGTCTCACATCAGCTAATTTAGGGAACGATCATGAGCTTATAATCAAAGAATACTCTCTCCATTGGTATGAGGTATGTCGGGAAATCCCAAAGCAAAGCCATGAGAGCTTATGTTCAAAGTGGACAATACCATACAATTGTCGAGAGTCGTAAAGGACAAAAAAAAAAAAAAAAAAAAAAAAAATAAATAATATATATTTTCCATTTAAAAGGAAAAAGAATTGTAATTGTAACAGTGGGCCGGGCCAAATGAGTGGCATAATTGAAAATAATATGAAACTCCCTGTTTAAAAAAGTAAAAAGATAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAACCCTAATCGGCATATTACCCTCTCTTCCTCTGCGAGTTTGCAGAATCTATTCCCCACTTTCGGGCTCTCTTTTATCTTGCCGCCGCTCAATCCTTCTCTTTGGTTTCCTCTAATTCGTAGCTTGCGAAAGAGCTCCAGAGGTATGTTTATGCCTGTTTCTTCGATTTCTCCGTCGTTTATTCTGCAGTTGTCCGGTTATAATTCGTACGATTTTACTCCTTTCGTTTTTTATGCTTGTTTCATTGGTTTGTGCGTTGGTTGCCTTTTCTTTTCATTCTAGGAATTTGTGTTTTGAATTGCGTATGCGTTAACGTTTTTTCTTTTTTTACAATTCAGTTTTTTAG

mRNA sequence

ATGGCCAGTGCACCAGTACTTTCCGGCGCTACAATCAACACCATCCTCCTCCAGAAGCAGCCAGCAACTAGCCTACGATCGGTGTCGAACTTCGGCCAGGGTCTTTTCGGGCTGAAGGACAGCACCCGTTGGTGGGCGATTGGTTGCCAAGGCAGTGTACAGTGTGAAGCTGATCACCCCAGAAGGAGAGAAGGAGTTCATGTGCCCCGACGACGGAAAGTAGTGGGAGGGCAGGTGGAACAGTCGGACGGTAGCTACCTCGACGACGACCAGATTGAAGAAGGTTGGGTTCTAACTTGTGTTGCATACCCTCAATCTAATATTGTCATTCAGACCCACAAGGAGGAAGAGCTTAATCTATTCCCCACTTTCGGGCTCTCTTTTATCTTGCCGCCGCTCAATCCTTCTCTTTGGTTTCCTCTAATTCGTAGCTTGCGAAAGAGCTCCAGAGTTTTTTAG

Coding sequence (CDS)

ATGGCCAGTGCACCAGTACTTTCCGGCGCTACAATCAACACCATCCTCCTCCAGAAGCAGCCAGCAACTAGCCTACGATCGGTGTCGAACTTCGGCCAGGGTCTTTTCGGGCTGAAGGACAGCACCCGTTGGTGGGCGATTGGTTGCCAAGGCAGTGTACAGTGTGAAGCTGATCACCCCAGAAGGAGAGAAGGAGTTCATGTGCCCCGACGACGGAAAGTAGTGGGAGGGCAGGTGGAACAGTCGGACGGTAGCTACCTCGACGACGACCAGATTGAAGAAGGTTGGGTTCTAACTTGTGTTGCATACCCTCAATCTAATATTGTCATTCAGACCCACAAGGAGGAAGAGCTTAATCTATTCCCCACTTTCGGGCTCTCTTTTATCTTGCCGCCGCTCAATCCTTCTCTTTGGTTTCCTCTAATTCGTAGCTTGCGAAAGAGCTCCAGAGTTTTTTAG

Protein sequence

MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHPRRREGVHVPRRRKVVGGQVEQSDGSYLDDDQIEEGWVLTCVAYPQSNIVIQTHKEEELNLFPTFGLSFILPPLNPSLWFPLIRSLRKSSRVF

Homology

[Close]

BLAST of Csor.00g243930 vs. ExPASy Swiss-Prot
Match: Q9ZTS2 (Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-18
Identity = 56/140 (40.00%), Postives = 75/140 (53.57%), Query Frame = 0


Query: 7   LSGATINTILLQKQPA-TSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQC---------- 66
           +S   I+T  + ++PA TSL+ + N G+ LFGLK S     + C  S +           
Sbjct: 4   VSATMISTSFMPRKPAVTSLKPIPNVGEALFGLK-SANGGKVTCMASYKVKLITPDGPIE 63

Query: 67  --------------EADHP---RRREGVHVPRRRKVVGGQVEQSDGSYLDDDQIEEGWVL 119
                         EA H      R G       K+ GG V+Q+DG++LDDDQ+EEGWVL
Sbjct: 64  FDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVL 123

[Close]

BLAST of Csor.00g243930 vs. ExPASy Swiss-Prot
Match: O04683 (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17
Identity = 53/144 (36.81%), Postives = 71/144 (49.31%), Query Frame = 0


Query: 2   ASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHPR 61
           A+   LSGAT++T    K P  +    +N G+ LFGLK S     +    + +     P 
Sbjct: 3   ATTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPE 62

Query: 62  RRE-----------------GVHVPR----------RRKVVGGQVEQSDGSYLDDDQIEE 119
            ++                 G+ +P             KV  G V Q DGS+LDDDQI+E
Sbjct: 63  GKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKE 122

[Close]

BLAST of Csor.00g243930 vs. ExPASy Swiss-Prot
Match: Q43517 (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SEND33 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.7e-17
Identity = 56/140 (40.00%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 7   LSGATINTILLQKQPA-TSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHPR---- 66
           +SG  I+T  L ++PA TSL+++SN G+ LFGLK S R   I C  S + +   P     
Sbjct: 4   ISGTMISTSFLPRKPAVTSLKAISNVGEALFGLK-SGRNGRITCMASYKVKLITPEGPIE 63

Query: 67  -------------RREGVHVPR----------RRKVVGGQVEQSDGSYLDDDQIEEGWVL 119
                          EG  +P             KV  G V+QSDG++LD+DQ   G+VL
Sbjct: 64  FECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVL 123

[Close]

BLAST of Csor.00g243930 vs. ExPASy Swiss-Prot
Match: P09911 (Ferredoxin-1, chloroplastic OS=Pisum sativum OX=3888 GN=PETF PE=1 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 57/147 (38.78%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQP-ATSLRSVSNFGQGLFGLKDSTRWWAIGC---------- 60
           MA+ P L G  ++T  L+ QP   S+ +   F  G  GLK S +   +            
Sbjct: 1   MATTPALYGTAVSTSFLRTQPMPMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLV 60

Query: 61  --QGSVQCEA-------DHPRR---------REGVHVPRRRKVVGGQVEQSDGSYLDDDQ 119
              G+ + E        DH            R G       KVVGG+V+QSDGS+LDD+Q
Sbjct: 61  TPDGTQEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQ 120

[Close]

BLAST of Csor.00g243930 vs. ExPASy Swiss-Prot
Match: P04669 (Ferredoxin, chloroplastic OS=Silene latifolia subsp. alba OX=52853 GN=PETF PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.4e-16
Identity = 57/143 (39.86%), Postives = 72/143 (50.35%), Query Frame = 0


Query: 4   APVLSGATINTILLQK-QPATSLRSVSNFGQGLFGLKDSTRWWAIGC-----------QG 63
           A  LS  +++  LL K QP  +    +N GQ LFGLK  +R                  G
Sbjct: 2   ASTLSTLSVSASLLPKQQPMVASSLPTNMGQALFGLKAGSRGRVTAMATYKVTLITKESG 61

Query: 64  SV--QCEAD----HPRRREGVHVPR----------RRKVVGGQVEQSDGSYLDDDQIEEG 119
           +V   C  D         EG+ +P             KVV G V+QSD S+LDDDQIE G
Sbjct: 62  TVTFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAG 121

[Close]

BLAST of Csor.00g243930 vs. NCBI nr
Match: KAG6576986.1 (Ferredoxin, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315 bits (808), Expect = 1.19e-108
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60
           MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP
Sbjct: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60

Query: 61  RRREGVHVPRRRKVVGGQVEQSDGSYLDDDQIEEGWVLTCVAYPQSNIVIQTHKEEELNL 120
           RRREGVHVPRRRKVVGGQVEQSDGSYLDDDQIEEGWVLTCVAYPQSNIVIQTHKEEELNL
Sbjct: 61  RRREGVHVPRRRKVVGGQVEQSDGSYLDDDQIEEGWVLTCVAYPQSNIVIQTHKEEELNL 120

Query: 121 FPTFGLSFILPPLNPSLWFPLIRSLRKSSRVF 152
           FPTFGLSFILPPLNPSLWFPLIRSLRKSSRVF
Sbjct: 121 FPTFGLSFILPPLNPSLWFPLIRSLRKSSRVF 152

[Close]

BLAST of Csor.00g243930 vs. NCBI nr
Match: XP_022922723.1 (ferredoxin-A-like [Cucurbita moschata])

HSP 1 Score: 158 bits (400), Expect = 1.43e-46
Identity = 89/145 (61.38%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60
           MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDST    +  +     +   P
Sbjct: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTLGGRLVAKAVYSVKLLTP 60

Query: 61  RRRE-----------------GVHVPRR----------RKVVGGQVEQSDGSYLDDDQIE 118
              +                 G+ +P             KVVGGQVEQSDGSYLDDDQIE
Sbjct: 61  EGEKEFMCPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKVVGGQVEQSDGSYLDDDQIE 120

[Close]

BLAST of Csor.00g243930 vs. NCBI nr
Match: XP_022984878.1 (ferredoxin-A-like [Cucurbita maxima])

HSP 1 Score: 156 bits (394), Expect = 1.16e-45
Identity = 88/145 (60.69%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60
           MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDST    +  +     +   P
Sbjct: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTLGGRLVAKAVYSVKLLTP 60

Query: 61  RRRE-----------------GVHVPRR----------RKVVGGQVEQSDGSYLDDDQIE 118
              +                 G+ +P             KVVGG+VEQSDGSYLDDDQIE
Sbjct: 61  EGEKEFMCPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKVVGGKVEQSDGSYLDDDQIE 120

[Close]

BLAST of Csor.00g243930 vs. NCBI nr
Match: XP_023552303.1 (ferredoxin-like [Cucurbita pepo subsp. pepo] >KAG7015006.1 hypothetical protein SDJN02_22637, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152 bits (383), Expect = 5.44e-44
Identity = 85/145 (58.62%), Postives = 96/145 (66.21%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60
           MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLK S+R   +        +   P
Sbjct: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKGSSRGGRLVAMAEYNVKLITP 60

Query: 61  RRRE-----------------GVHVPRR----------RKVVGGQVEQSDGSYLDDDQIE 118
              +                 G+ +P             KVVGG+VEQSDGS+LDDDQIE
Sbjct: 61  EGEKEFVCPDDVYVLDQAEEMGIDLPYSCRAGSCSSCAGKVVGGKVEQSDGSFLDDDQIE 120

[Close]

BLAST of Csor.00g243930 vs. NCBI nr
Match: XP_038891717.1 (ferredoxin-A-like [Benincasa hispida])

HSP 1 Score: 129 bits (325), Expect = 3.40e-35
Identity = 71/145 (48.97%), Postives = 86/145 (59.31%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60
           MAS P LSGAT+NT  L+KQPAT LRS SNF QGLFGLK  +R   +        +   P
Sbjct: 1   MASIPALSGATMNTSFLRKQPATRLRSASNFSQGLFGLKGGSRGGRVIAMAEYNVKLITP 60

Query: 61  RRRE-----------------GVHVPRR----------RKVVGGQVEQSDGSYLDDDQIE 118
              +                 G+ +P             KV+ G+V+QSDG++LDDDQ E
Sbjct: 61  EGEKEFSCPDDEYILDRADDLGIDLPYSCRAGSCSSCAGKVIEGKVDQSDGNFLDDDQAE 120

[Close]

BLAST of Csor.00g243930 vs. ExPASy TrEMBL
Match: A0A6J1E7N5 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111430632 PE=3 SV=1)

HSP 1 Score: 158 bits (400), Expect = 6.90e-47
Identity = 89/145 (61.38%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60
           MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDST    +  +     +   P
Sbjct: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTLGGRLVAKAVYSVKLLTP 60

Query: 61  RRRE-----------------GVHVPRR----------RKVVGGQVEQSDGSYLDDDQIE 118
              +                 G+ +P             KVVGGQVEQSDGSYLDDDQIE
Sbjct: 61  EGEKEFMCPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKVVGGQVEQSDGSYLDDDQIE 120

[Close]

BLAST of Csor.00g243930 vs. ExPASy TrEMBL
Match: A0A6J1JBU5 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111483022 PE=3 SV=1)

HSP 1 Score: 156 bits (394), Expect = 5.63e-46
Identity = 88/145 (60.69%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60
           MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDST    +  +     +   P
Sbjct: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTLGGRLVAKAVYSVKLLTP 60

Query: 61  RRRE-----------------GVHVPRR----------RKVVGGQVEQSDGSYLDDDQIE 118
              +                 G+ +P             KVVGG+VEQSDGSYLDDDQIE
Sbjct: 61  EGEKEFMCPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKVVGGKVEQSDGSYLDDDQIE 120

[Close]

BLAST of Csor.00g243930 vs. ExPASy TrEMBL
Match: A0A6J1C815 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111008273 PE=3 SV=1)

HSP 1 Score: 125 bits (314), Expect = 7.62e-34
Identity = 70/145 (48.28%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKDSTRWWAIGCQGSVQCEADHP 60
           MAS+  LSGA ++T  L+KQPA  LRSVSNFGQGLFGLK  +R   +    + + +   P
Sbjct: 1   MASSTALSGAMMSTSFLRKQPAGGLRSVSNFGQGLFGLKGGSRGGRVTAMATYKVKLITP 60

Query: 61  R-----------------RREGVHVPRR----------RKVVGGQVEQSDGSYLDDDQIE 118
                               +G  +P             KVV G+V+QSD S+LDDDQ+E
Sbjct: 61  EGEKEFSCPDDVYVLDQAEEQGFDLPYSCRAGSCSSCAGKVVSGKVDQSDNSFLDDDQLE 120

[Close]

BLAST of Csor.00g243930 vs. ExPASy TrEMBL
Match: A0A5D3CHZ7 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00080 PE=3 SV=1)

HSP 1 Score: 117 bits (293), Expect = 1.18e-30
Identity = 72/146 (49.32%), Postives = 88/146 (60.27%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKD-STRWWAI------------ 60
           MAS+P LS AT+NT  L+KQPAT L SV NFGQ LFGLK  S+R   +            
Sbjct: 1   MASSPALSSATLNTSFLRKQPATRLGSVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  -GCQGSVQCEADH---PRRRE-GVHVPRR----------RKVVGGQVEQSDGSYLDDDQI 118
              +   +C+ D     R  E G  +P             KVV G+V+QSDGSYLD+DQ+
Sbjct: 61  PAGETEFKCQDDDYILDRAEEMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDEDQM 120

[Close]

BLAST of Csor.00g243930 vs. ExPASy TrEMBL
Match: A0A1S3C2F7 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496101 PE=3 SV=1)

HSP 1 Score: 117 bits (293), Expect = 1.18e-30
Identity = 72/146 (49.32%), Postives = 88/146 (60.27%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLKD-STRWWAI------------ 60
           MAS+P LS AT+NT  L+KQPAT L SV NFGQ LFGLK  S+R   +            
Sbjct: 1   MASSPALSSATLNTSFLRKQPATRLGSVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  -GCQGSVQCEADH---PRRRE-GVHVPRR----------RKVVGGQVEQSDGSYLDDDQI 118
              +   +C+ D     R  E G  +P             KVV G+V+QSDGSYLD+DQ+
Sbjct: 61  PAGETEFKCQDDDYILDRAEEMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDEDQM 120

[Close]

BLAST of Csor.00g243930 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-15
Identity = 56/147 (38.10%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFG-QGLFGLKDST----RWWAIGC------ 60
           MAS  + S     + L ++Q   SLRS+     Q LFGLK ST    R  A+        
Sbjct: 1   MASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFI 60

Query: 61  ----QGSVQCEAD----HPRRREGVHVPR----------RRKVVGGQVEQSDGSYLDDDQ 119
               +  V+CE D          G+ +P             KVV G ++QSD S+LDD+Q
Sbjct: 61  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 120

[Close]

BLAST of Csor.00g243930 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-15
Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 3   SAPVLSGATINTILLQKQPA-TSLRSVSNFG-QGLFGLKDST------------RWWAIG 62
           ++  LS A + T  +++ PA  SLRS+ +   Q LFGLK  T            +   I 
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 63  CQGSVQCEAD------HPRRREGVHVPR----------RRKVVGGQVEQSDGSYLDDDQI 119
            +G ++ E D            G+ +P             KVV G V+QSD S+LDD+QI
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

[Close]

BLAST of Csor.00g243930 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 71.2 bits (173), Expect = 7.9e-13
Identity = 30/46 (65.22%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 73  KVVGGQVEQSDGSYLDDDQIEEGWVLTCVAYPQSNIVIQTHKEEEL 119
           ++V G V+QSDGS+L+D  +E+G+VLTCVAYPQS+ VI THKE EL
Sbjct: 109 QIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Csor.00g243930 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 58.5 bits (140), Expect = 5.3e-09
Identity = 22/46 (47.83%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 73  KVVGGQVEQSDGSYLDDDQIEEGWVLTCVAYPQSNIVIQTHKEEEL 119
           K+V G+V+QS GS+L+++QI++G++LTC+A P  + V+ THK+ +L
Sbjct: 102 KLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147

[Close]

BLAST of Csor.00g243930 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.0e-04
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 65  GVHVPRRRKVVGGQVEQSDGSYLDDDQIEEGWVLTCVAYPQSNIVIQTHKEEEL 119
           GV +    K+V G V+QS G  L DD +E G+ L C +YP S+  I+   EEEL
Sbjct: 92  GVCMTCPAKLVTGTVDQS-GGMLSDDVVERGYTLLCASYPTSDCHIKMIPEEEL 144

The following BLAST results are available for this feature:

BLAST of Csor.00g243930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZTS2	4.6e-18	40.00	Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1	[more]
O04683	1.0e-17	36.81	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
Q43517	8.7e-17	40.00	Ferredoxin-1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SEND33 PE=2 SV=1	[more]
P09911	1.1e-16	38.78	Ferredoxin-1, chloroplastic OS=Pisum sativum OX=3888 GN=PETF PE=1 SV=2	[more]
P04669	7.4e-16	39.86	Ferredoxin, chloroplastic OS=Silene latifolia subsp. alba OX=52853 GN=PETF PE=2 ...	[more]

BLAST of Csor.00g243930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576986.1	1.19e-108	100.00	Ferredoxin, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022922723.1	1.43e-46	61.38	ferredoxin-A-like [Cucurbita moschata]	[more]
XP_022984878.1	1.16e-45	60.69	ferredoxin-A-like [Cucurbita maxima]	[more]
XP_023552303.1	5.44e-44	58.62	ferredoxin-like [Cucurbita pepo subsp. pepo] >KAG7015006.1 hypothetical protein ...	[more]
XP_038891717.1	3.40e-35	48.97	ferredoxin-A-like [Benincasa hispida]	[more]

BLAST of Csor.00g243930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7N5	6.90e-47	61.38	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111430632 PE=3 SV=1	[more]
A0A6J1JBU5	5.63e-46	60.69	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111483022 PE=3 SV=1	[more]
A0A6J1C815	7.62e-34	48.28	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111008273 PE=3 SV=1	[more]
A0A5D3CHZ7	1.18e-30	49.32	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00080 PE=...	[more]
A0A1S3C2F7	1.18e-30	49.32	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496101 PE=3 SV=1	[more]

BLAST of Csor.00g243930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10960.1	3.8e-15	38.10	ferredoxin 1	[more]
AT1G60950.1	8.4e-15	36.30	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	7.9e-13	65.22	ferredoxin 3	[more]
AT5G10000.1	5.3e-09	47.83	ferredoxin 4	[more]
AT4G14890.1	1.0e-04	44.44	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 38..122 e-value: 1.1E-12 score: 49.4
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 72..118
None	No IPR available	PANTHER	PTHR43112:SF20	FERREDOXIN	coord: 72..118
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 73..111 e-value: 4.91219E-10 score: 51.2416
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 73..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g243930.m01	Csor.00g243930.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051536	iron-sulfur cluster binding