Csor.00g243750 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g243750
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	50S ribosomal protein L33-like
Location	Csor_Chr16: 2049460 .. 2050876 (-)
RNA-Seq Expression	Csor.00g243750
Synteny	Csor.00g243750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAACAATTCGAAGGCTTTGTTTGGACTCAGCGCTTTCTTGTGGAGAAAGGAACCGATTTCTCTGTAATTCTGCGTCTTCAACTCCTCCAAGCTTCGTCTCTTTCAAGTGTCTCTCCTTCTCTGCTGCTCTCTCGTTGAGCGTCGTTCCCAATGTCAAAGGTAACTGCGAACATTTCATCCTAAATCATCATCGCGAATCCATTCTCTTATCGTCACTTCTTATGAAGAATTTGAAAATCACAATCAAAAGATCAGAAAGAATGGGAACTAAGTATCATAATCGAGAATTTCTGATCGGATAATTTTGTTCGGAGGGGTTTATTTATAGTTTTTTCTTACAAGCCAAACAGATGGCGGGGAAATTTAACATTTGGGGGATCTGTTGAAATTTTCAGAATCGTTGTCACAGAGCGCTCGGGAGAGATCAATTCCTTATGGATCCGTAATTTGTATGGCCAAAAGATATGCTCCTAACACTACGAAGAGAAAGGTATGGTTATTTTAGCTTCGACAGCGTGTGAATCATGGTAGAATTTTGCAAATCGAGAGGCCGGGGATGCGTATCATTTGTTTGTGTATTTGTCTATGTTAGGGCTCTAACCATATTTCTTCTTGTGAGATCAATCCATAGATATCGATAAAAAATAAATTCAGTTATAAGAAGTACATGTAAGAGCATGATTGATCAAGTCCTTATCAATTTTGATTAATTTCTATATGAACAAGTGTAATATATGAAATCATCTTCAAACAGAATTGACCCCCTTTATGTTAGTTTGTATGACGTCCTTCAAAAGTCCCGCGTTCTGATTGCTATCACTTCCATATAGTATATGTAACAGCCCAAGCCCACCGCTAGCCGAGTCCTCTTTGGACTTTCCCTTCAAGAGTTTCAAAACGCATCTATTAGAGAGAAGTTTTCACACCCTTACAAAGAGTATTTCGTTCTCCTCTCCGACGTGGGATCTCACAGTATAGAATGTATATTTATCTAATTTGAGTTCGTATCTTTGAAACGAGGTGATAGAGAAAATCTGATTAACATTCTGCTGGGATTATTCTACACCGACGTTTGGATTATTCTACTTCAGTGATGCAAAAGTCATTGGGAATAATATTGTGTAATTTGTTCATTATGTTAATTTCACTGATGATTTGATCATGAAATAACTTGTCGATTGCATTCAAATGCAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGAAAAGAAAAAGAAGACAAGGAGGAAAGGGGGAAGGAAAGATTTCAAAATAATCCGACTCTCCTCAACTGCTGGGACTGGTTTTTTCTATGCCAAGAAAAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATTTGACCCTCTTGCAAAACGACATGTTCTGTTCACTGAAGTCAAGTAA

mRNA sequence

ATGGCGGCAACAATTCGAAGGCTTTGTTTGGACTCAGCGCTTTCTTGTGGAGAAAGGAACCGATTTCTCTGTAATTCTGCGTCTTCAACTCCTCCAAGCTTCGTCTCTTTCAAGTGTCTCTCCTTCTCTGCTGCTCTCTCGTTGAGCGTCGTTCCCAATGTCAAAGAATCGTTGTCACAGAGCGCTCGGGAGAGATCAATTCCTTATGGATCCGTAATTTGTATGGCCAAAAGATATGCTCCTAACACTACGAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGAAAAGAAAAAGAAGACAAGGAGGAAAGGGGGAAGGAAAGATTTCAAAATAATCCGACTCTCCTCAACTGCTGGGACTGGTTTTTTCTATGCCAAGAAAAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATTTGACCCTCTTGCAAAACGACATGTTCTGTTCACTGAAGTCAAGTAA

Coding sequence (CDS)

ATGGCGGCAACAATTCGAAGGCTTTGTTTGGACTCAGCGCTTTCTTGTGGAGAAAGGAACCGATTTCTCTGTAATTCTGCGTCTTCAACTCCTCCAAGCTTCGTCTCTTTCAAGTGTCTCTCCTTCTCTGCTGCTCTCTCGTTGAGCGTCGTTCCCAATGTCAAAGAATCGTTGTCACAGAGCGCTCGGGAGAGATCAATTCCTTATGGATCCGTAATTTGTATGGCCAAAAGATATGCTCCTAACACTACGAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGAAAAGAAAAAGAAGACAAGGAGGAAAGGGGGAAGGAAAGATTTCAAAATAATCCGACTCTCCTCAACTGCTGGGACTGGTTTTTTCTATGCCAAGAAAAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATTTGACCCTCTTGCAAAACGACATGTTCTGTTCACTGAAGTCAAGTAA

Protein sequence

MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQSARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSSTAGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK

Homology

[Close]

BLAST of Csor.00g243750 vs. ExPASy Swiss-Prot
Match: Q5FFJ4 (50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Gardel) OX=302409 GN=rpmG PE=3 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 23/46 (50.00%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 114 IIRLSSTAGTGFFYAKKKS-RKMADKIELQKFDPLAKRHVLFTEVK 159
           +++L+S+AGTG+FY KK++ +K+ +K+  +K+DP+A++HVLFTE K
Sbjct: 9   LVKLASSAGTGYFYVKKRNPKKLINKLSFRKYDPVARKHVLFTEEK 54

[Close]

BLAST of Csor.00g243750 vs. ExPASy Swiss-Prot
Match: Q5HBV6 (50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Welgevonden) OX=254945 GN=rpmG PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 23/46 (50.00%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 114 IIRLSSTAGTGFFYAKKKS-RKMADKIELQKFDPLAKRHVLFTEVK 159
           +++L+S+AGTG+FY KK++ +K+ +K+  +K+DP+A++HVLFTE K
Sbjct: 9   LVKLASSAGTGYFYVKKRNPKKLINKLSFRKYDPVARKHVLFTEEK 54

[Close]

BLAST of Csor.00g243750 vs. ExPASy Swiss-Prot
Match: Q2W1A2 (50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rpmG PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 114 IIRLSSTAGTGFFY-AKKKSRKMADKIELQKFDPLAKRHVLFTEVK 159
           +I+L STAGTGFFY AKK  RK  +K+E +K+DP+ ++HV F E K
Sbjct: 8   LIKLLSTAGTGFFYVAKKNPRKTTEKLEFRKYDPVVRKHVQFKEAK 53

[Close]

BLAST of Csor.00g243750 vs. ExPASy Swiss-Prot
Match: B6IN38 (50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rpmG PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-07
Identity = 25/46 (54.35%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 114 IIRLSSTAGTGFFYAKKKS-RKMADKIELQKFDPLAKRHVLFTEVK 159
           +I+L S+A TGFFY KKK+ RK  +K+E +K+DP+A++HV+F E K
Sbjct: 8   LIKLVSSADTGFFYVKKKNPRKTTEKLEFKKYDPVARKHVVFKEAK 53

[Close]

BLAST of Csor.00g243750 vs. ExPASy Swiss-Prot
Match: Q0AQ67 (50S ribosomal protein L33 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rpmG PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.5e-07
Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 0


Query: 115 IRLSSTAGTGFFY-AKKKSRKMADKIELQKFDPLAKRHVLFTEVK 159
           IRL+STAGTG+FY  KK +R M +K+ L+K+DP+A++HV F E K
Sbjct: 9   IRLNSTAGTGYFYVTKKNARTMTEKLVLKKYDPVARKHVDFKEAK 53

[Close]

BLAST of Csor.00g243750 vs. NCBI nr
Match: KAG6577004.1 (hypothetical protein SDJN03_24578, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301 bits (770), Expect = 1.17e-102
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ
Sbjct: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Csor.00g243750 vs. NCBI nr
Match: KAG7015026.1 (rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297 bits (761), Expect = 2.76e-101
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ
Sbjct: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSI YGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Csor.00g243750 vs. NCBI nr
Match: XP_023552499.1 (uncharacterized protein LOC111810144 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290 bits (742), Expect = 3.18e-98
Identity = 153/158 (96.84%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRRLC DSALSCGERNRFLC+SASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ
Sbjct: 1   MAATIRRLCFDSALSCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSI +GSV CMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIRHGSVTCMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Csor.00g243750 vs. NCBI nr
Match: XP_022922690.1 (uncharacterized protein LOC111430611 isoform X2 [Cucurbita moschata] >XP_022922691.1 uncharacterized protein LOC111430611 isoform X2 [Cucurbita moschata])

HSP 1 Score: 288 bits (736), Expect = 2.61e-97
Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRR CLDSALSCGERNRFLC+SASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ
Sbjct: 1   MAATIRRHCLDSALSCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSI +GSVICMA+RYAPN TKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIRHGSVICMARRYAPNNTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Csor.00g243750 vs. NCBI nr
Match: XP_022922689.1 (uncharacterized protein LOC111430611 isoform X1 [Cucurbita moschata])

HSP 1 Score: 286 bits (731), Expect = 1.67e-96
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRR CLDSALSCGERNRFLC+SASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ
Sbjct: 1   MAATIRRHCLDSALSCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSI +GSVICMA+RYAPN TKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIRHGSVICMARRYAPNNTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEV 157
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEV
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEV 157

[Close]

BLAST of Csor.00g243750 vs. ExPASy TrEMBL
Match: A0A6J1E4T6 (uncharacterized protein LOC111430611 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430611 PE=3 SV=1)

HSP 1 Score: 288 bits (736), Expect = 1.26e-97
Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRR CLDSALSCGERNRFLC+SASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ
Sbjct: 1   MAATIRRHCLDSALSCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSI +GSVICMA+RYAPN TKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIRHGSVICMARRYAPNNTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158

[Close]

BLAST of Csor.00g243750 vs. ExPASy TrEMBL
Match: A0A6J1E445 (uncharacterized protein LOC111430611 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430611 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 8.10e-97
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRR CLDSALSCGERNRFLC+SASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ
Sbjct: 1   MAATIRRHCLDSALSCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSI +GSVICMA+RYAPN TKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIRHGSVICMARRYAPNNTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEV 157
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEV
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEV 157

[Close]

BLAST of Csor.00g243750 vs. ExPASy TrEMBL
Match: A0A6J1J250 (uncharacterized protein LOC111482725 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482725 PE=3 SV=1)

HSP 1 Score: 282 bits (722), Expect = 1.72e-95
Identity = 149/158 (94.30%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRRLCL SAL CGERNRFLC+SASSTPPSFVSFKCLSFSAALSL VVPNVKESLSQ
Sbjct: 1   MAATIRRLCLGSALFCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLLVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSI +GSVICMA+RYAPNTTKRKRLSRKRGGDPEKK+KTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIRHGSVICMARRYAPNTTKRKRLSRKRGGDPEKKRKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTE K
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEAK 158

[Close]

BLAST of Csor.00g243750 vs. ExPASy TrEMBL
Match: A0A6J1J566 (uncharacterized protein LOC111482725 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482725 PE=3 SV=1)

HSP 1 Score: 282 bits (722), Expect = 6.11e-95
Identity = 149/158 (94.30%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSLSVVPNVKESLSQ 60
           MAATIRRLCL SAL CGERNRFLC+SASSTPPSFVSFKCLSFSAALSL VVPNVKESLSQ
Sbjct: 1   MAATIRRLCLGSALFCGERNRFLCDSASSTPPSFVSFKCLSFSAALSLLVVPNVKESLSQ 60

Query: 61  SARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLSST 120
           SARERSI +GSVICMA+RYAPNTTKRKRLSRKRGGDPEKK+KTRRKGGRKDFKIIRLSST
Sbjct: 61  SARERSIRHGSVICMARRYAPNTTKRKRLSRKRGGDPEKKRKTRRKGGRKDFKIIRLSST 120

Query: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158
           AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTE K
Sbjct: 121 AGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEAK 158

[Close]

BLAST of Csor.00g243750 vs. ExPASy TrEMBL
Match: A0A1S3C284 (uncharacterized protein LOC103496073 OS=Cucumis melo OX=3656 GN=LOC103496073 PE=3 SV=1)

HSP 1 Score: 230 bits (586), Expect = 6.69e-75
Identity = 124/160 (77.50%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 1   MAATIRRLCLDSALSCGERNRFLCNSASSTPPSFVSFKCLSFSAALSL--SVVPNVKESL 60
           MA TI+R CLD  LSCG+RN+FL NS+SS P +F++F   SF A LSL  S VPNVK  L
Sbjct: 1   MATTIQRFCLDLTLSCGKRNQFLSNSSSSAPSNFITFNSPSFPATLSLTLSFVPNVKGLL 60

Query: 61  SQSARERSIPYGSVICMAKRYAPNTTKRKRLSRKRGGDPEKKKKTRRKGGRKDFKIIRLS 120
            Q A ERSI YGSVICMAKRYAP+TTKRKRLSRKRGGDP KKKKTRRKGGRKDFKI+RLS
Sbjct: 61  PQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGGRKDFKIVRLS 120

Query: 121 STAGTGFFYAKKKSRKMADKIELQKFDPLAKRHVLFTEVK 158
           STA TGFFYAKKKSRKMADKIE+QK+DP+A RHVLFTEVK
Sbjct: 121 STARTGFFYAKKKSRKMADKIEVQKYDPIANRHVLFTEVK 160

[Close]

BLAST of Csor.00g243750 vs. TAIR 10
Match: AT3G06320.1 (Ribosomal protein L33 family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 109 RKDFKIIRLSSTAGTGFFYAKKKSRK-MADKIELQKFDPLAKRHVLFTEVK 159
           +K F  IRL S AGTGFFY K+KS K + +K+E +K+DP   RHVLFTE K
Sbjct: 6   KKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQK 56

[Close]

BLAST of Csor.00g243750 vs. TAIR 10
Match: AT5G18790.1 (Ribosomal protein L33 family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 109 RKDFKIIRLSSTAGTGFFYAKKKSRK-MADKIELQKFDPLAKRHVLFTEVK 159
           +K F  IRL S AGTGFFY K+KS K + +K+E +K+DP   RHVLFTE K
Sbjct: 6   KKTFMFIRLVSAAGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQK 56

The following BLAST results are available for this feature:

BLAST of Csor.00g243750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5FFJ4	2.2e-07	50.00	50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Gardel) OX=302409 GN=...	[more]
Q5HBV6	2.2e-07	50.00	50S ribosomal protein L33 OS=Ehrlichia ruminantium (strain Welgevonden) OX=25494...	[more]
Q2W1A2	3.8e-07	56.52	50S ribosomal protein L33 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]
B6IN38	5.0e-07	54.35	50S ribosomal protein L33 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX...	[more]
Q0AQ67	8.5e-07	57.78	50S ribosomal protein L33 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rpmG P...	[more]

BLAST of Csor.00g243750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577004.1	1.17e-102	100.00	hypothetical protein SDJN03_24578, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7015026.1	2.76e-101	99.37	rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023552499.1	3.18e-98	96.84	uncharacterized protein LOC111810144 [Cucurbita pepo subsp. pepo]	[more]
XP_022922690.1	2.61e-97	96.20	uncharacterized protein LOC111430611 isoform X2 [Cucurbita moschata] >XP_0229226...	[more]
XP_022922689.1	1.67e-96	96.18	uncharacterized protein LOC111430611 isoform X1 [Cucurbita moschata]	[more]

BLAST of Csor.00g243750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4T6	1.26e-97	96.20	uncharacterized protein LOC111430611 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E445	8.10e-97	96.18	uncharacterized protein LOC111430611 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J250	1.72e-95	94.30	uncharacterized protein LOC111482725 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J566	6.11e-95	94.30	uncharacterized protein LOC111482725 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3C284	6.69e-75	77.50	uncharacterized protein LOC103496073 OS=Cucumis melo OX=3656 GN=LOC103496073 PE=...	[more]

BLAST of Csor.00g243750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06320.1	1.4e-09	58.82	Ribosomal protein L33 family protein	[more]
AT5G18790.1	1.4e-09	58.82	Ribosomal protein L33 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038584	Ribosomal protein L33 superfamily	GENE3D	2.20.28.120	Ribosomal protein L33	coord: 99..157 e-value: 3.3E-17 score: 64.3
IPR001705	Ribosomal protein L33	TIGRFAM	TIGR01023	TIGR01023	coord: 109..158 e-value: 2.0E-13 score: 48.5
IPR001705	Ribosomal protein L33	PFAM	PF00471	Ribosomal_L33	coord: 114..158 e-value: 2.8E-9 score: 37.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..109
None	No IPR available	PANTHER	PTHR15238:SF1	54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL	coord: 108..158
None	No IPR available	PANTHER	PTHR15238	54S RIBOSOMAL PROTEIN L39, MITOCHONDRIAL	coord: 108..158
IPR018264	Ribosomal protein L33, conserved site	PROSITE	PS00582	RIBOSOMAL_L33	coord: 127..145
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 113..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g243750.m01	Csor.00g243750.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009536	plastid
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome