Csor.00g243650 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACAGCGGCTTCGTTTTGGTTGTGCTGTCATTTCTATAACCATGTTCATTGATGGTGCTACGCCTCCTCTCTCTGTTCCTCTTATTCCTTTTCTTGCCTTTTACTTAACCTTCTATTTCTACTCCTTCTCGCCCCTCCATGCCGGACGCTATCTGTTGCTTCTCCACTGGTAAGCTCTTGTTTCGTTTTTTAAGATTGTTTTGTCTTTTATCGTTCTACATTTTTTGTTCCATCCAATAGAGGAAGGGAAATCATCCGGTAAGCTTTTGTTGTTTTTTGTATTGCATTTCTTATTTATTACGGTGTCGATCAGTTCATGGTTATTTGTTTCTTCTGGCATTTGGATTGCGTGCATTGTTCACACTTCAGAAATCACATAATCTATTTGTTGTAATGTCTGCGAAGGATATGGATATGAACCTTTTGTACTTTTATGAACTTTTGTTTTTTTGTTTCTCATTTTGATTAGCATTCGTTTTTGTTTATCTCTGTGCAACGTACTTCGAATCTTAGATTGCGAACCCTCTATGGAGTATGAACGCAATGGAGGATTAATGGTGATGATGAGAAGGATCTATTTGTTTTGGTTGTGAATTAGTTTTAGGTTTTGTAACAATTATCTTGATTTGTCTGGTGGTTCACGGGTTTTTCTGCATTCATGCCCTGTTTACTCTCCAGTAGAGCATATAATCTATTTGATTAAATGTCTGTGATGAGTAGGAGTATGAGACTCTAATCTGTGCACTTTGCATTTTCCATTTTGATTAGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTAAGCTTTCTCTTTCATTTGTTCTCTCTTGAAGATATGAATTAAGGCTATAGTAACAGTCTTTTCATCGTTCTCTATTTCTTCATGCATGTTCGTATATTGCAATGTTTTATATATATATTTTTTTTGTTGGGAACTTAGCAGGAACCTCATTATTTGGGCATAAAAAAGGGAATTGATTAGGTTGGTTGTGAAGATTACTCGGTTCAATAATTTTTTGGCTTTTAGTCTTGTATTTTGTGCGTCGTCTCTGGTTACGAACTTCTGCTGAAGTACAGAACCAGGAGAAACTTATTCAAATTTAAATTTGACGTTTGATTTCTCTACCTAATATTTGGAGGTATAAGCTTCCTAATTTATTGATTATTGCTTGGAGTTTTACCTTGTTCATCATATCACTGAAATATTTGTTTCTCATAAAAAAATCACATCAGTTATTGTGGTAGTTTGTTAAAGCTTTATCTGTCTCTTGCTTTCCTTTTGAATGAACCTCTCATGAGAACAAATTGAGATTGAAAAATTATTTTTCTAAACAAAAACTTAGTGAAATATGATGTCTCTGTTATTATCGAATTCTTAACTCGCTTCTCCATTTTCCCACTTATGCTCCTCTTCAAATAACTACATTTGCACTTGTTCTTATCAAAATTTCAGTTATTGTAAGTTGCTCTGTCTTGTTCATGGGTCAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGTATATTGAATGTGCTTAATAATTTGTTACCTATCTATTTTGCTTTCTTCTGATGATCGATTGAGCTGCTTCCCGTAGCTTTACCATGTTGCTTTATTTCCAGCTCCCTTGGATCCAATTTGTTGGCCAACTTATGCCCCTACAATAAATTATAAACGCTGGAGTTGCTTCTTTAGAGATCAGAATCAGTGATTCGTATACTGTCTTTTGGTTATTTTTCAATGGCGTTGTCTTAAATGTTATTCCCATTTCCCAGTTCATGGTTTTTGATTAACCGATGGAATAAGGAAGAGCAATCCAAACAATATCAGCAACAAGAACGAAGTCATAATCTTCTTGTTTCTCGTGAACTAACTAACAAAGAATCTTGAATCCAACTACTTTGGTTCTGATTCATAATAACTTTTTATTGAGGCTTGCCTTCACTCGACTTAGATATTATTGTTTGTGATGCTGAAACAACGTCTTTACATTCCAGGCATATTTAGAGTTCAGTTTTTTCCAGATTCATATCTAAAGATGAGTTCTTCAGGTATTATCTTGTCATTTTGTGCCTTTGTTGGCCACAATACTTGTGATTGCCTAACCTATAATTTTGTATGATGCTGATGCGGTCAACGTTTATACTAACCAAAGAAGATTCCAACATTACCTATGATCTATTTGTTATACAGACATGTACCTCGATGGTAATAACGAATGAATCGATCATTTTTTATGAGATGGTTTAATCTTTTGTCTTCCAGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAAGTGCCATTAACTGTCTTCCATGAATTTTTTAATATTCTGATTGAATACTCATTTTCTACTGGGAAATTTGAACAAAATCTTTTCGGGTTTGTTCGAATCTTAGGAGATCAGCGTTATCATTGCTTTGGTTGCTGCTTAAAACGGTCATGCTTACATAGGAGGTGTATGGGAAATAGCATAGTTATGAAATATTCTGTTTGTTAACTCACTTATATTTTATTTTGTTTACTCATTTATAATCCACTGCTTAATAGCGATTAAAGAAAATCAGGGGATTCTTTTTAATATCTACTTCAACAATCTAGGATCCATAAAATCTTTCCAAATTAGTCGTTTTTAGCCATTTTATATAATATTTTACTGTAGAGCTATTTTAAAAATATTATTTAAAATTTTTTAAATTTTCATTTGGTACTCTTTTTATTTCATTATTTGTTTTTATTTTTTAAATAAGCTTGCATGGTCACCTTTTTTAACGTTTAATTTTTCTGTTTAAAATCTTAGTCAAAATTTGAAATCTAATTTAATGACTTAAAGAACATGTTTCTTCTGATTACAGTTATCATTCTTCCACTCTCCAGGGAGAAAATTTTAGGGTTTCTTTCAAGTACTTGATTTGTAGCTGAAGAGTATCGTTTATCTTGACTCAATTGTCAATTTACTAAAGACATAACATTATCTGTTGTGTGATGCTCAACCATCACAGGTAGAATGGTGTGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGGTATGCTTCATCAATCACACATGGGCCTGAATTGAATTATACTCATTCAGTTATAGAAAATTGAAACCTAACGTTTATCCATATACTTGAAAAATGAAGGAAAACAATAGATTTAACGAATTGGTTCTTAACATTTGCTCATCATTTGTTCTTTACAATATTATTTTTTTTTTCATTGAAAATAGTTAAGACACTTGAAAATATTGAAATACTAGTCAACCGTAGTAATTTTCCTAACTTCATCATATTTCACTTGGTCAAAACATATATTTTCAATTCAGAAGTCAGAAGTCTGAATCTCTAATCTCATATATCTCATCTAAGACATGCATTTAACAAAAATTTAGAAGTTTGAATTTCTCACTAGCTTGCCAAACAAGTTAATTATTAATTTTTAAGTAGTGAGTGGTTTTGAATCATAAATCATTAATGAACTTTAAACCCTATTTAATACATTATTCAATGTCTTTGGGTTGTAAAAGATTGCTTAGTGGTAATCTGACCTTAGAAAAAACATTTCTTGGATTTAAATTTTATTTTGGTCCAAAAAGTTGAACACTCATTTTCCTTTGGCTCTTGTATCTTCTATTTTTCTGGGATAATTTCCAAATTTTCATAAATACTTATAGTTTGTTTTGGGGCTCATTGTTAAATATTTTGCATTGTATTTAATAAAACTCACAAGCCACATGTTTTGAATTTAATGCTAGACTGGAGAAATGACCTAAAACGCAAGTCTATATGGTATTAAGCAAATTTTTTTATAAAAATATTTAAAGTATTTGATGATAAAGATCAAAATTAACCTTCCTAACTTGGTACTGAACAAAACATTCAAAAGTTTGAGGACCAAGATAAAATAAGGAAGAAAGTTGAGAGAAATAATATTCAATGAATTAAATCACTAATTGACTTCACTTATCTCATATTAAATGTTTGTTTATTGACAAGATTTCTTAACGGAACTTTACTCTTAAATTATTGCGTACTCAAATTATTATATCATTAAAGAATTGTCTCGTCTTAGATCACTACTCACTTATTTTTCTGTCTCTTTCATATAAACTGTAGCACTCATTACTATTATCTTGAATTAAATCACTAAGCTGTTTTTCCTTTTTGATTGACATGAGTATGCTTACTTTTGGCCATTTTTTAATTTGTACGAAACCATTTCGCTTATATCCTTTTTTATTATGAAAATTAAACACAATGATGAGTGAAAACACATCAAACAGCCAAATGTACCTATTTATTACCAATTATGAAGCAAACTGAGCAAATAAATCAATGCTGAGAAGATCAAAATCAGTTGGTAAAGAGGGTATATTTTATACCTGTTGACAAATGAGAGTTCTTTATCAGCATGAAATCAGTTCCTGTTTTTGTCTGCAAATAACAAAGCCTTTAAAGGAAAATTGTGACTTTTCTGTTATGTCATTTAATGGTGAACCCCATCTGCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGA ATGAAACAGCGGCTTCGTTTTGGTTGTGCTGTCATTTCTATAACCATGTTCATTGATGGTGCTACGCCTCCTCTCTCTGTTCCTCTTATTCCTTTTCTTGCCTTTTACTTAACCTTCTATTTCTACTCCTTCTCGCCCCTCCATGCCGGACGCTATCTGTTGCTTCTCCACTGCATTCGTTTTTGTTTATCTCTGTGCAACGTACTTCGAATCTTAGATTGCGAACCCTCTATGGAGTATGAACGCAATGGAGGATTAATGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGTGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGA ATGAAACAGCGGCTTCGTTTTGGTTGTGCTGTCATTTCTATAACCATGTTCATTGATGGTGCTACGCCTCCTCTCTCTGTTCCTCTTATTCCTTTTCTTGCCTTTTACTTAACCTTCTATTTCTACTCCTTCTCGCCCCTCCATGCCGGACGCTATCTGTTGCTTCTCCACTGCATTCGTTTTTGTTTATCTCTGTGCAACGTACTTCGAATCTTAGATTGCGAACCCTCTATGGAGTATGAACGCAATGGAGGATTAATGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGTGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGA MKQRLRFGCAVISITMFIDGATPPLSVPLIPFLAFYLTFYFYSFSPLHAGRYLLLLHCIRFCLSLCNVLRILDCEPSMEYERNGGLMHSGWIRMSPASCFWTIFNQRKVKHVSSNGEQVHVKTGKSNGSPNGKSEDLAATRIQNAFRSFTARKIVHDSKGPERCQVLIQGETATKQVLSFIHSWSRMQQEIRTRRLCMVTEYRVKQKKQENQLKLEAKIHELEVEWCGGSETKEEILFKIQHREEAAVRRERAMAYAFSHQWRANSILDLNPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQRSKLNEITYQPGSKVSTSANHSLSNKGSSKARNSYMPK Homology
BLAST of Csor.00g243650 vs. ExPASy Swiss-Prot
Match: Q9LKA0 (Protein IQ-DOMAIN 10 OS=Arabidopsis thaliana OX=3702 GN=IQD10 PE=1 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.2e-54 Identity = 128/260 (49.23%), Postives = 161/260 (61.92%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy Swiss-Prot
Match: Q0WNP8 (Protein IQ-DOMAIN 9 OS=Arabidopsis thaliana OX=3702 GN=IQD9 PE=1 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 2.8e-50 Identity = 100/187 (53.48%), Postives = 134/187 (71.66%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy Swiss-Prot
Match: F4J061 (Protein IQ-DOMAIN 5 OS=Arabidopsis thaliana OX=3702 GN=IQD5 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.2e-30 Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy Swiss-Prot
Match: O64852 (Protein IQ-DOMAIN 6 OS=Arabidopsis thaliana OX=3702 GN=IQD6 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.3e-25 Identity = 85/247 (34.41%), Postives = 123/247 (49.80%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy Swiss-Prot
Match: F4IUJ7 (Protein IQ-DOMAIN 4 OS=Arabidopsis thaliana OX=3702 GN=IQD4 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.8e-20 Identity = 73/211 (34.60%), Postives = 120/211 (56.87%), Query Frame = 0
BLAST of Csor.00g243650 vs. NCBI nr
Match: KAG6577014.1 (Protein IQ-DOMAIN 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 704 bits (1818), Expect = 6.06e-256 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
BLAST of Csor.00g243650 vs. NCBI nr
Match: KAG7015037.1 (Protein IQ-DOMAIN 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 513 bits (1320), Expect = 1.47e-181 Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of Csor.00g243650 vs. NCBI nr
Match: XP_022922651.1 (protein IQ-DOMAIN 1-like [Cucurbita moschata] >XP_022922652.1 protein IQ-DOMAIN 1-like [Cucurbita moschata]) HSP 1 Score: 512 bits (1319), Expect = 2.09e-181 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of Csor.00g243650 vs. NCBI nr
Match: XP_023552254.1 (protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo] >XP_023552255.1 protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 509 bits (1310), Expect = 4.92e-180 Identity = 257/259 (99.23%), Postives = 257/259 (99.23%), Query Frame = 0
BLAST of Csor.00g243650 vs. NCBI nr
Match: XP_022984520.1 (protein IQ-DOMAIN 1 [Cucurbita maxima] >XP_022984521.1 protein IQ-DOMAIN 1 [Cucurbita maxima]) HSP 1 Score: 507 bits (1305), Expect = 2.84e-179 Identity = 256/259 (98.84%), Postives = 256/259 (98.84%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy TrEMBL
Match: A0A6J1E3W9 (protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430594 PE=4 SV=1) HSP 1 Score: 512 bits (1319), Expect = 1.01e-181 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy TrEMBL
Match: A0A6J1J5H6 (protein IQ-DOMAIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111482790 PE=4 SV=1) HSP 1 Score: 507 bits (1305), Expect = 1.38e-179 Identity = 256/259 (98.84%), Postives = 256/259 (98.84%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy TrEMBL
Match: A0A0A0KVH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G088730 PE=4 SV=1) HSP 1 Score: 431 bits (1109), Expect = 1.01e-149 Identity = 221/256 (86.33%), Postives = 234/256 (91.41%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy TrEMBL
Match: A0A6J1CMA6 (protein IQ-DOMAIN 1 OS=Momordica charantia OX=3673 GN=LOC111012770 PE=4 SV=1) HSP 1 Score: 415 bits (1067), Expect = 2.39e-143 Identity = 217/257 (84.44%), Postives = 232/257 (90.27%), Query Frame = 0
BLAST of Csor.00g243650 vs. ExPASy TrEMBL
Match: A0A1S4DYY8 (protein IQ-DOMAIN 1-like OS=Cucumis melo OX=3656 GN=LOC103492919 PE=4 SV=1) HSP 1 Score: 407 bits (1046), Expect = 5.65e-139 Identity = 238/363 (65.56%), Postives = 262/363 (72.18%), Query Frame = 0
BLAST of Csor.00g243650 vs. TAIR 10
Match: AT3G15050.1 (IQ-domain 10 ) HSP 1 Score: 213.8 bits (543), Expect = 2.3e-55 Identity = 128/260 (49.23%), Postives = 161/260 (61.92%), Query Frame = 0
BLAST of Csor.00g243650 vs. TAIR 10
Match: AT2G33990.1 (IQ-domain 9 ) HSP 1 Score: 200.7 bits (509), Expect = 2.0e-51 Identity = 100/187 (53.48%), Postives = 134/187 (71.66%), Query Frame = 0
BLAST of Csor.00g243650 vs. TAIR 10
Match: AT3G22190.1 (IQ-domain 5 ) HSP 1 Score: 134.0 bits (336), Expect = 2.3e-31 Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 0
BLAST of Csor.00g243650 vs. TAIR 10
Match: AT3G22190.2 (IQ-domain 5 ) HSP 1 Score: 134.0 bits (336), Expect = 2.3e-31 Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 0
BLAST of Csor.00g243650 vs. TAIR 10
Match: AT2G26180.1 (IQ-domain 6 ) HSP 1 Score: 116.7 bits (291), Expect = 3.8e-26 Identity = 85/247 (34.41%), Postives = 123/247 (49.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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