Homology
BLAST of Csor.00g242960 vs. ExPASy Swiss-Prot
Match:
Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 72/258 (27.91%), Postives = 91/258 (35.27%), Query Frame = 0
Query: 97 SANTTAHAQSEGGGSCFKCGKLGHWARDCDAPGSGGSFSASGNDTSVAEKSC-PCGMGVC 156
S N ++ GG+CF CG++GH A+DCD G SF G S E C CG
Sbjct: 81 SLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCG---- 140
Query: 157 VVLTANTERNRGRKFYKCPVRQENGG--------------CG----FFEWCDNASATNIM 216
+ G C RQ GG CG + C S N
Sbjct: 141 ---------DVGHFARDC--RQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGN-- 200
Query: 217 TYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEAS 276
YG S C G NVG C TCG
Sbjct: 201 RYGGGGGRGSGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTC----YTCG--------G 260
Query: 277 MAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWARDCS-QSLAPSNQSSSA 335
+ +V SK+ G +CY+CGG GH ARDC + S +
Sbjct: 261 VGHIAKVCTSKI----------PSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGS 299
BLAST of Csor.00g242960 vs. ExPASy Swiss-Prot
Match:
O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08
Identity = 63/240 (26.25%), Postives = 90/240 (37.50%), Query Frame = 0
Query: 105 QSEGGGSCFKCGKLGHWARDCDAPGSGGSFSAS--GNDTSVAEKSCPCGMGVCVVLTANT 164
+S GG C+ CG GH+ARDC + G+G A+ GND CG V V T
Sbjct: 127 RSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYT-----CG-DVGHVARDCT 186
Query: 165 ERNRGRKFYKCPVRQENGGC------GFF--EWCDNASATNIMTYGSQNRASSSSFSDLK 224
+++ G + V+ N GC G F + +A N+ + G
Sbjct: 187 QKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGG------------- 246
Query: 225 CPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTT 284
G+G+C Y C G
Sbjct: 247 ---GSGTC---------------YSC------------------------------GGVG 297
Query: 285 DRSKGMPATARAGSSCYKCGGEGHWARDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSN 335
++ + CY+CGG GH ARDC Q S + +C+KCGK GH+AR+CS+
Sbjct: 307 HIARDCATKRQPSRGCYQCGGSGHLARDCDQ--RGSGGGGNDNACYKCGKEGHFARECSS 297
BLAST of Csor.00g242960 vs. ExPASy Swiss-Prot
Match:
Q04832 (DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 5.6e-08
Identity = 70/260 (26.92%), Postives = 97/260 (37.31%), Query Frame = 0
Query: 105 QSEGGGSCFKCGKLGHWARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTER 164
++E SC CGK GH+AR+C S G E+S C E
Sbjct: 11 RTESSTSCRNCGKEGHYARECPEADSKGD-----------ERSTTC-------FRCGEEG 70
Query: 165 NRGRKFYKCPVRQENGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKC-PCG----- 224
+ R +CP +G G C M+ N A + +C CG
Sbjct: 71 HMSR---ECPNEARSGAAGAMT-CFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHL 130
Query: 225 --------AGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEASMAAKNQVSGSKVY 284
GS K G + Q Y S TC C +A +++ +G Y
Sbjct: 131 SRDCPSSQGGSRGGYGQKRGRSGAQGGY---SGDRTC---YKCGDAGHISRDCPNGQGGY 190
Query: 285 GNTTDRS---------------KGMPATARAGS-SCYKCGGEGHWARDCSQSLAPSNQSS 333
DR+ G + AG CYKCG GH +R+C PS S+
Sbjct: 191 SGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSREC-----PSAGST 237
BLAST of Csor.00g242960 vs. ExPASy Swiss-Prot
Match:
Q9NG98 (DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 GN=Top3alpha PE=2 SV=2)
HSP 1 Score: 56.2 bits (134), Expect = 8.1e-07
Identity = 47/193 (24.35%), Postives = 66/193 (34.20%), Query Frame = 0
Query: 165 NRGRKFYKCPVRQENGGCGFFEWCD----------------------------------- 224
N GR +YKCP E C FF+W D
Sbjct: 1053 NLGRLYYKCPKPDE---CNFFQWADEPPSSAKSKNSTGSAPQSTTSWGSNRVVTLPSIQQ 1112
Query: 225 ------------NASATNIMT-----YGSQNRASSSSFSDLKCPCGAGSCITLTAKTGEN 284
N+S+T +T +N A+ ++ C CG + K G N
Sbjct: 1113 SNSQRGQSSMRSNSSSTVTITQTKTKQQERNTATPGDGEEVMCNCGQLASQLTVRKDGPN 1172
Query: 285 VGQQFYRCPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSS--C 304
G+ FY CP+ + +CGFF+W E + S N RS+ T+ + C
Sbjct: 1173 QGRPFYACPTREKSCGFFKWGDEDQNQGASSTSWGSANRNPPGRSQPTAITSDGPKTRRC 1232
BLAST of Csor.00g242960 vs. ExPASy Swiss-Prot
Match:
P27484 (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06
Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0
Query: 287 GSSCYKCGGEGHWARDCSQS--------LAPSNQSSSAGSCFKCGKPGHWARDCSN 335
GS C+KCG GH+ARDCSQS G C+KCG+ GH+AR+C++
Sbjct: 156 GSGCFKCGESGHFARDCSQSGGGGGGGRFGGGGGGGGGGGCYKCGEDGHFARECTS 211
BLAST of Csor.00g242960 vs. NCBI nr
Match:
KAG6577083.1 (DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 693 bits (1788), Expect = 6.01e-252
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query: 1 MKFEAKWNFDFDLGDDDDEDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS 60
MKFEAKWNFDFDLGDDDDEDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS
Sbjct: 1 MKFEAKWNFDFDLGDDDDEDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS 60
Query: 61 PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH 120
PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH
Sbjct: 61 PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH 120
Query: 121 WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQENG 180
WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQENG
Sbjct: 121 WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQENG 180
Query: 181 GCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRC 240
GCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRC
Sbjct: 181 GCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRC 240
Query: 241 PSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWA 300
PSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWA
Sbjct: 241 PSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWA 300
Query: 301 RDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC 335
RDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC
Sbjct: 301 RDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC 335
BLAST of Csor.00g242960 vs. NCBI nr
Match:
KAG7015092.1 (DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 682 bits (1760), Expect = 1.20e-247
Identity = 332/334 (99.40%), Postives = 332/334 (99.40%), Query Frame = 0
Query: 1 MKFEAKWNFDFDLGDDDDEDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS 60
MKFEAK NFDFDLGDDDDEDFL EVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS
Sbjct: 1 MKFEAKRNFDFDLGDDDDEDFLSEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS 60
Query: 61 PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH 120
PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH
Sbjct: 61 PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH 120
Query: 121 WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQENG 180
WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQENG
Sbjct: 121 WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQENG 180
Query: 181 GCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRC 240
GCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRC
Sbjct: 181 GCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRC 240
Query: 241 PSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWA 300
PSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWA
Sbjct: 241 PSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWA 300
Query: 301 RDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSN 334
RDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSN
Sbjct: 301 RDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSN 334
BLAST of Csor.00g242960 vs. NCBI nr
Match:
XP_022931285.1 (cold shock domain-containing protein 3-like [Cucurbita moschata])
HSP 1 Score: 676 bits (1744), Expect = 3.19e-245
Identity = 331/336 (98.51%), Postives = 331/336 (98.51%), Query Frame = 0
Query: 1 MKFEAKWNFDFDLGDDDD-EDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60
MKFEAK NFDFDLGDDDD EDFL EVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV
Sbjct: 1 MKFEAKRNFDFDLGDDDDDEDFLSEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60
Query: 61 SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120
SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG
Sbjct: 61 SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120
Query: 121 HWARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN 180
HWARDCDAPGSGGSFS SGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN
Sbjct: 121 HWARDCDAPGSGGSFSFSGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN 180
Query: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240
GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR
Sbjct: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240
Query: 241 CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHW 300
CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTD SKGMPATARAGSSCYKCGGEGHW
Sbjct: 241 CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDTSKGMPATARAGSSCYKCGGEGHW 300
Query: 301 ARDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC 335
ARDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC
Sbjct: 301 ARDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC 336
BLAST of Csor.00g242960 vs. NCBI nr
Match:
XP_023552737.1 (cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 666 bits (1718), Expect = 3.95e-241
Identity = 326/344 (94.77%), Postives = 329/344 (95.64%), Query Frame = 0
Query: 1 MKFEAKWNFDFDLGDDDDEDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS 60
MKFEAK NFDFDLGDDDDEDFL EVAAAEARALASKRRKIPNHTIDPPKRA+AEVTSKVS
Sbjct: 1 MKFEAKRNFDFDLGDDDDEDFLSEVAAAEARALASKRRKIPNHTIDPPKRAVAEVTSKVS 60
Query: 61 PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH 120
PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH
Sbjct: 61 PNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGH 120
Query: 121 WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQENG 180
WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKC VRQENG
Sbjct: 121 WARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCAVRQENG 180
Query: 181 GCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRC 240
GCGFFEWCDNAS+TNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTG+NVGQQFYRC
Sbjct: 181 GCGFFEWCDNASSTNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGDNVGQQFYRC 240
Query: 241 PSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWA 300
PSYQATCGFFQWCKE SMAAKNQ SGSKVYGNTTD SKGMPATARAGSSCYKCGGEGHWA
Sbjct: 241 PSYQATCGFFQWCKEPSMAAKNQASGSKVYGNTTDTSKGMPATARAGSSCYKCGGEGHWA 300
Query: 301 RDCSQSLAPSN---------QSSSAGSCFKCGKPGHWARDCSNC 335
RDCSQSLAPSN QSSSAGSCFKCGKPGHWARDCSNC
Sbjct: 301 RDCSQSLAPSNPPPAEFGRNQSSSAGSCFKCGKPGHWARDCSNC 344
BLAST of Csor.00g242960 vs. NCBI nr
Match:
XP_022984959.1 (cold shock domain-containing protein 3-like [Cucurbita maxima])
HSP 1 Score: 655 bits (1690), Expect = 7.61e-237
Identity = 324/345 (93.91%), Postives = 327/345 (94.78%), Query Frame = 0
Query: 1 MKFEAKWNFDFDLGDDDD-EDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60
MKFEAK NFDFDLGDDDD EDFL EVAAAEARALASKRRKIPNHTI+PPKRAIAEVT+KV
Sbjct: 1 MKFEAKRNFDFDLGDDDDDEDFLSEVAAAEARALASKRRKIPNHTINPPKRAIAEVTNKV 60
Query: 61 SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120
SPN DAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQS+GGGSCFKCGKLG
Sbjct: 61 SPNVDAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSDGGGSCFKCGKLG 120
Query: 121 HWARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN 180
HWARDCDAPGSGGSFSAS NDTSVAEKSCPCG GVCVVLTANTERNRGRKFYKCPVRQEN
Sbjct: 121 HWARDCDAPGSGGSFSASENDTSVAEKSCPCGRGVCVVLTANTERNRGRKFYKCPVRQEN 180
Query: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240
GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR
Sbjct: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240
Query: 241 CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHW 300
CPSYQATCGFFQWCKE SMAAKNQVS SKVYGNTTD SKGMPATARAGSSCYKCGGEGHW
Sbjct: 241 CPSYQATCGFFQWCKEPSMAAKNQVSASKVYGNTTDTSKGMPATARAGSSCYKCGGEGHW 300
Query: 301 ARDCSQSLAPSN---------QSSSAGSCFKCGKPGHWARDCSNC 335
ARDCSQSLAPSN QSSSAGSCFKCGKPGHWARDCSNC
Sbjct: 301 ARDCSQSLAPSNPPPAEFGRNQSSSAGSCFKCGKPGHWARDCSNC 345
BLAST of Csor.00g242960 vs. ExPASy TrEMBL
Match:
A0A6J1EZ11 (cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111437513 PE=4 SV=1)
HSP 1 Score: 676 bits (1744), Expect = 1.54e-245
Identity = 331/336 (98.51%), Postives = 331/336 (98.51%), Query Frame = 0
Query: 1 MKFEAKWNFDFDLGDDDD-EDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60
MKFEAK NFDFDLGDDDD EDFL EVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV
Sbjct: 1 MKFEAKRNFDFDLGDDDDDEDFLSEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60
Query: 61 SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120
SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG
Sbjct: 61 SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120
Query: 121 HWARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN 180
HWARDCDAPGSGGSFS SGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN
Sbjct: 121 HWARDCDAPGSGGSFSFSGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN 180
Query: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240
GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR
Sbjct: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240
Query: 241 CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHW 300
CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTD SKGMPATARAGSSCYKCGGEGHW
Sbjct: 241 CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDTSKGMPATARAGSSCYKCGGEGHW 300
Query: 301 ARDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC 335
ARDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC
Sbjct: 301 ARDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSNC 336
BLAST of Csor.00g242960 vs. ExPASy TrEMBL
Match:
A0A6J1JBZ0 (cold shock domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483073 PE=4 SV=1)
HSP 1 Score: 655 bits (1690), Expect = 3.68e-237
Identity = 324/345 (93.91%), Postives = 327/345 (94.78%), Query Frame = 0
Query: 1 MKFEAKWNFDFDLGDDDD-EDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60
MKFEAK NFDFDLGDDDD EDFL EVAAAEARALASKRRKIPNHTI+PPKRAIAEVT+KV
Sbjct: 1 MKFEAKRNFDFDLGDDDDDEDFLSEVAAAEARALASKRRKIPNHTINPPKRAIAEVTNKV 60
Query: 61 SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120
SPN DAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQS+GGGSCFKCGKLG
Sbjct: 61 SPNVDAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSDGGGSCFKCGKLG 120
Query: 121 HWARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQEN 180
HWARDCDAPGSGGSFSAS NDTSVAEKSCPCG GVCVVLTANTERNRGRKFYKCPVRQEN
Sbjct: 121 HWARDCDAPGSGGSFSASENDTSVAEKSCPCGRGVCVVLTANTERNRGRKFYKCPVRQEN 180
Query: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240
GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR
Sbjct: 181 GGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYR 240
Query: 241 CPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHW 300
CPSYQATCGFFQWCKE SMAAKNQVS SKVYGNTTD SKGMPATARAGSSCYKCGGEGHW
Sbjct: 241 CPSYQATCGFFQWCKEPSMAAKNQVSASKVYGNTTDTSKGMPATARAGSSCYKCGGEGHW 300
Query: 301 ARDCSQSLAPSN---------QSSSAGSCFKCGKPGHWARDCSNC 335
ARDCSQSLAPSN QSSSAGSCFKCGKPGHWARDCSNC
Sbjct: 301 ARDCSQSLAPSNPPPAEFGRNQSSSAGSCFKCGKPGHWARDCSNC 345
BLAST of Csor.00g242960 vs. ExPASy TrEMBL
Match:
A0A6J1C4N6 (DNA-binding protein HEXBP-like OS=Momordica charantia OX=3673 GN=LOC111008238 PE=4 SV=1)
HSP 1 Score: 512 bits (1318), Expect = 2.28e-180
Identity = 257/364 (70.60%), Postives = 279/364 (76.65%), Query Frame = 0
Query: 1 MKFEAKWNFDFDLGDDDDEDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVS 60
MK EAK NF+FDL DDDDEDFL VAAAEARALASKRR+IPNHTIDPPK AIAE
Sbjct: 1 MKIEAKRNFEFDLEDDDDEDFLSAVAAAEARALASKRRRIPNHTIDPPKMAIAE------ 60
Query: 61 PNADAEGIYIAALKGDPIILSQLSGRIANS-------GNKGFISANTTAHAQSEGGGSCF 120
+ EG+Y+AAL+G P + SQ+SG ANS N+GF+SAN TA QSEGGGSCF
Sbjct: 61 ---EPEGLYMAALRGKPNLPSQISGGTANSRAKGVAAANRGFVSANPTA--QSEGGGSCF 120
Query: 121 KCGKLGHWARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKC 180
KCGKLGHWARDCDAPG GGSF +G D SVAEK+CPCG+GVC+VLTANTERNRGRKFYKC
Sbjct: 121 KCGKLGHWARDCDAPGGGGSFGTAGTDASVAEKACPCGLGVCIVLTANTERNRGRKFYKC 180
Query: 181 PVRQENGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENV 240
PVRQENGGCGFFEWCD+AS TN+MTYGSQNRASSS FSDL CPCGAGSCI LTAKTGENV
Sbjct: 181 PVRQENGGCGFFEWCDSASGTNVMTYGSQNRASSSLFSDLMCPCGAGSCIILTAKTGENV 240
Query: 241 GQQFYRCPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPAT---------- 300
GQQFYRCPSYQ +CGFFQWCKE MA KNQV+ K+YGN D SK T
Sbjct: 241 GQQFYRCPSYQESCGFFQWCKEPPMATKNQVNDYKIYGNANDTSKSFAPTPRTSSSIDAS 300
Query: 301 ----ARAGSSCYKCGGEGHWARDCSQSLAPSN--------QSSSAGSCFKCGKPGHWARD 335
R GSSCYKCGGEGHWARDCSQS SN S++G+CFKC KPGHWARD
Sbjct: 301 RSFAVRTGSSCYKCGGEGHWARDCSQSHTSSNPPFAELGRNPSASGTCFKCSKPGHWARD 353
BLAST of Csor.00g242960 vs. ExPASy TrEMBL
Match:
A0A0A0KVB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G062410 PE=4 SV=1)
HSP 1 Score: 410 bits (1054), Expect = 1.28e-140
Identity = 214/318 (67.30%), Postives = 237/318 (74.53%), Query Frame = 0
Query: 27 AAEARALASKRRKIPNHTIDPPKRAIAEVTSKVSPNADAEGIYIAALKGDPIILSQLSGR 86
AAE +L K R +PN TID PK A+AEV+ KV NAD G YIA KG LSQ+SG
Sbjct: 11 AAEVVSLVKKVRNVPNPTIDLPKNAVAEVSHKVPLNADFLGTYIAPYKGSRA-LSQISGS 70
Query: 87 IANSGNKGFISANTTAHAQSEGGGSCFKCGKLGHWARDCDAPGSGGSFSASGNDTSVAEK 146
A+S I NTTA QSEG GSCFKCGKLGHWARDCDAPG GGSFS+SGND SV +K
Sbjct: 71 EASSDKNVSIYENTTA--QSEGDGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDMSVPDK 130
Query: 147 SCPCGMGVCVVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNIMTYGSQNRAS 206
+CPCG G+C VLTANTERNRGRKFYKCPVRQENGGCGFFEWCD+AS N+++YGSQN S
Sbjct: 131 ACPCGSGICSVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDSASVANVVSYGSQNPLS 190
Query: 207 SSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEASMAAKNQVSG 266
SS FSDL+CPCGAGSC LTAKTG NVG+QFY CPS QA+C FF+WC+E SM KNQ S
Sbjct: 191 SS-FSDLQCPCGAGSCKILTAKTGNNVGKQFYCCPSSQASCRFFRWCEEPSMETKNQEST 250
Query: 267 SKVYGNTTDRSKGMPATAR--AGSSCYKCGGEGHWARDCSQSLAPS--------NQSSSA 326
KVYGNT D SK + + SS YK G EGHWARD SQS + S +QSSSA
Sbjct: 251 PKVYGNTNDTSKSATLNVKTSSSSSSYKYGSEGHWARDWSQSPSSSTSPAEYGRSQSSSA 310
Query: 327 GSCFKCGKPGHWARDCSN 334
GSCFKCG PGHWARDCSN
Sbjct: 311 GSCFKCGMPGHWARDCSN 324
BLAST of Csor.00g242960 vs. ExPASy TrEMBL
Match:
A0A2P5AI83 (DNA topoisomerase, type IA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_329900 PE=4 SV=1)
HSP 1 Score: 347 bits (891), Expect = 1.13e-115
Identity = 186/347 (53.60%), Postives = 230/347 (66.28%), Query Frame = 0
Query: 1 MKFEAKWNF-DFDLGDDDDEDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKV 60
MK E K +F + D + DDEDFL VAAAEA ALASKRR+I + A +V
Sbjct: 1 MKMERKKSFIEVDEEEYDDEDFLSHVAAAEANALASKRRRITPSAANAIVFASPATAKQV 60
Query: 61 SPNADAEGIYIAALKGDPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLG 120
S +AD +G+Y+AALKG+ + L A+ +G + A + GG SCFKCGK G
Sbjct: 61 SSSAD-DGVYLAALKGNQTL--PLRPTTASDPLRGRVPKGRDDEALAGGGDSCFKCGKSG 120
Query: 121 HWARDCDAPGSGGSFSAS---GNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVR 180
HWARDCD G GG + G D S+ EKSCPCG+G+C VLTANTE+NRGRKFYKCP+R
Sbjct: 121 HWARDCDGGGGGGGHHGNYGGGGDPSIPEKSCPCGLGICTVLTANTEKNRGRKFYKCPLR 180
Query: 181 QENGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQ 240
QENGGCGFFEWCDN S N M GS S+SS+ L+CPCGAG C+ LTAK+G NVGQQ
Sbjct: 181 QENGGCGFFEWCDNVSGANSMAGGSYT--SNSSYPGLQCPCGAGLCMILTAKSGNNVGQQ 240
Query: 241 FYRCPSYQ-ATCGFFQWCKEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGG 300
FYRCP+ Q ++CGFF+WC E +++ V+ SKV N +D + R GSSC+KCG
Sbjct: 241 FYRCPANQGSSCGFFKWCNEQTVSVGRPVTSSKVSHNLSDTNNSS-YNVRTGSSCFKCGK 300
Query: 301 EGHWARDCS-------QSLAPSNQSSSAGSCFKCGKPGHWARDCSNC 335
EGHWARDCS L + S+SAG+C+KCGKPGHW+RDC+ C
Sbjct: 301 EGHWARDCSVPSSNPTAELGGRSGSASAGTCYKCGKPGHWSRDCTFC 341
BLAST of Csor.00g242960 vs. TAIR 10
Match:
AT3G42860.1 (zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 245.0 bits (624), Expect = 8.7e-65
Identity = 139/322 (43.17%), Postives = 182/322 (56.52%), Query Frame = 0
Query: 16 DDDEDFLLEVAAAEARALASKRRKIPNHTIDPPKRAIAEVTSKVSPNADAEGIYIAALKG 75
D+++DFLL++AA EA A A+KR ++ ++ EG Y+AALKG
Sbjct: 12 DEEDDFLLQLAAIEAEA-AAKRPRV---------------------SSIPEGPYMAALKG 71
Query: 76 DPIILSQLSGRIANSGNKGFISANTTAHAQSEGGGSCFKCGKLGHWARDCDAPGSGGSFS 135
Q N +K A TT Q GG G A + D P
Sbjct: 72 SK--SDQWQQSPLNPASKSRSVAVTTGGFQRSDGG--------GGVAGEQDFP------- 131
Query: 136 ASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRKFYKCPVRQENGGCGFFEWCD--NASA 195
EKSCPCG+G+C++LT+NT +N GRKFYKCP R+ENGGCGFF+WCD +S
Sbjct: 132 ---------EKSCPCGVGICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSG 191
Query: 196 TNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWC 255
T+ T S + + F D +CPCGAG C LTAKTGENVG+QFYRCP ++ +CGFF+WC
Sbjct: 192 TSTTTSNSYGNGNDTKFPDHQCPCGAGLCRVLTAKTGENVGRQFYRCPVFEGSCGFFKWC 251
Query: 256 KEASMAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWARDCS--QSLAPSN 315
+ +++ S +K N D A+ G+ CYKCG EGHWARDC+ P
Sbjct: 252 NDNVVSSPTSYSVTK-NSNFGDSDTRGYQNAKTGTPCYKCGKEGHWARDCTVQSDTGPVK 284
Query: 316 QSSSAGSCFKCGKPGHWARDCS 334
+S+AG CFKCGKPGHW+RDC+
Sbjct: 312 STSAAGDCFKCGKPGHWSRDCT 284
BLAST of Csor.00g242960 vs. TAIR 10
Match:
AT5G13920.1 (GRF zinc finger / Zinc knuckle protein )
HSP 1 Score: 87.4 bits (215), Expect = 2.3e-17
Identity = 51/145 (35.17%), Postives = 65/145 (44.83%), Query Frame = 0
Query: 110 GSCFKCGKLGHWARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRGRK 169
G CF+C + GHW DC S D CPCG G C + ANT N GRK
Sbjct: 9 GDCFRCRQAGHWINDCPL--------KSYTDDPPPAIQCPCGGGFCEIKVANTRENPGRK 68
Query: 170 FYKCPVRQENGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTAKT 229
FYKCP Q C FF+WCD + +I +F+ C CGAG C +
Sbjct: 69 FYKCPTAQ---NCCFFKWCDKVTDEDI--------KFRPAFTIPICSCGAGPC----RRV 128
Query: 230 GENVGQQFYRCPSYQ--ATCGFFQW 253
+ G+ + C + CGFF+W
Sbjct: 129 KDVSGRAYLICCIKKGFGACGFFKW 130
BLAST of Csor.00g242960 vs. TAIR 10
Match:
AT2G17870.1 (cold shock domain protein 3 )
HSP 1 Score: 65.9 bits (159), Expect = 7.3e-11
Identity = 72/258 (27.91%), Postives = 91/258 (35.27%), Query Frame = 0
Query: 97 SANTTAHAQSEGGGSCFKCGKLGHWARDCDAPGSGGSFSASGNDTSVAEKSC-PCGMGVC 156
S N ++ GG+CF CG++GH A+DCD G SF G S E C CG
Sbjct: 81 SLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCG---- 140
Query: 157 VVLTANTERNRGRKFYKCPVRQENGG--------------CG----FFEWCDNASATNIM 216
+ G C RQ GG CG + C S N
Sbjct: 141 ---------DVGHFARDC--RQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGN-- 200
Query: 217 TYGSQNRASSSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEAS 276
YG S C G NVG C TCG
Sbjct: 201 RYGGGGGRGSGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTC----YTCG--------G 260
Query: 277 MAAKNQVSGSKVYGNTTDRSKGMPATARAGSSCYKCGGEGHWARDCS-QSLAPSNQSSSA 335
+ +V SK+ G +CY+CGG GH ARDC + S +
Sbjct: 261 VGHIAKVCTSKI----------PSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGS 299
BLAST of Csor.00g242960 vs. TAIR 10
Match:
AT4G36020.1 (cold shock domain protein 1 )
HSP 1 Score: 61.6 bits (148), Expect = 1.4e-09
Identity = 63/240 (26.25%), Postives = 90/240 (37.50%), Query Frame = 0
Query: 105 QSEGGGSCFKCGKLGHWARDCDAPGSGGSFSAS--GNDTSVAEKSCPCGMGVCVVLTANT 164
+S GG C+ CG GH+ARDC + G+G A+ GND CG V V T
Sbjct: 127 RSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYT-----CG-DVGHVARDCT 186
Query: 165 ERNRGRKFYKCPVRQENGGC------GFF--EWCDNASATNIMTYGSQNRASSSSFSDLK 224
+++ G + V+ N GC G F + +A N+ + G
Sbjct: 187 QKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGG------------- 246
Query: 225 CPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEASMAAKNQVSGSKVYGNTT 284
G+G+C Y C G
Sbjct: 247 ---GSGTC---------------YSC------------------------------GGVG 297
Query: 285 DRSKGMPATARAGSSCYKCGGEGHWARDCSQSLAPSNQSSSAGSCFKCGKPGHWARDCSN 335
++ + CY+CGG GH ARDC Q S + +C+KCGK GH+AR+CS+
Sbjct: 307 HIARDCATKRQPSRGCYQCGGSGHLARDCDQ--RGSGGGGNDNACYKCGKEGHFARECSS 297
BLAST of Csor.00g242960 vs. TAIR 10
Match:
AT3G43590.1 (zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 54.3 bits (129), Expect = 2.2e-07
Identity = 55/240 (22.92%), Postives = 85/240 (35.42%), Query Frame = 0
Query: 108 GGGSCFKCGKLGHWARDCDAPGSGGSFSASGNDTSVAEKSCPCGMGVCVVLTANTERNRG 167
G SC+ CG+ GH + +C P K C G C + + G
Sbjct: 164 GWVSCYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHD-CYIC-----KKTG 223
Query: 168 RKFYKCPVRQENGGCGFFEWCDNASATNIMTYGSQNRASSSSFSDLKCPCGAGSCITLTA 227
+ CP + +NG G C + S D++C
Sbjct: 224 HRAKDCPDKYKNGSKGAV--CLRCGDFGHDMILCKYEYSKEDLKDVQC------------ 283
Query: 228 KTGENVGQQFYRCPSYQATC-----GFFQW---CKEASMAAKNQVSGSKVYGNTTDRSKG 287
Y C S+ C W C + ++ + Y + +
Sbjct: 284 ----------YICKSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGLACGRHYEESNENDSA 343
Query: 288 MPA---TARAGSSCYKCGGEGHWARDC--SQSLAPSNQSSSAGSCFKCGKPGHWARDCSN 335
P +R S CY+CG EGH+AR+C S S++ S+ S C++C GH+AR+C N
Sbjct: 344 TPERLFNSREASECYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPN 373
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q94C69 | 1.0e-09 | 27.91 | Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P... | [more] |
| O65639 | 1.9e-08 | 26.25 | Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1 | [more] |
| Q04832 | 5.6e-08 | 26.92 | DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1 | [more] |
| Q9NG98 | 8.1e-07 | 24.35 | DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 GN=Top3alpha PE=2 S... | [more] |
| P27484 | 1.4e-06 | 44.64 | Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAG6577083.1 | 6.01e-252 | 100.00 | DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| KAG7015092.1 | 1.20e-247 | 99.40 | DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_022931285.1 | 3.19e-245 | 98.51 | cold shock domain-containing protein 3-like [Cucurbita moschata] | [more] |
| XP_023552737.1 | 3.95e-241 | 94.77 | cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_022984959.1 | 7.61e-237 | 93.91 | cold shock domain-containing protein 3-like [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1EZ11 | 1.54e-245 | 98.51 | cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
| A0A6J1JBZ0 | 3.68e-237 | 93.91 | cold shock domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
| A0A6J1C4N6 | 2.28e-180 | 70.60 | DNA-binding protein HEXBP-like OS=Momordica charantia OX=3673 GN=LOC111008238 PE... | [more] |
| A0A0A0KVB6 | 1.28e-140 | 67.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G062410 PE=4 SV=1 | [more] |
| A0A2P5AI83 | 1.13e-115 | 53.60 | DNA topoisomerase, type IA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_329900... | [more] |
