Csor.00g242710 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g242710
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	embryo defective 3006
Location	Csor_Chr16: 2647864 .. 2650974 (-)
RNA-Seq Expression	Csor.00g242710
Synteny	Csor.00g242710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAGAAGCACGAGATTGGTACGCCGGTGAGCTCCAGCCAGATCGATCTGAAAAAGTCATTCAAGCTTGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGTAAGAACGAAAGTTTCTGCAATATGTATAATTTCTTGTTCATAATTTTTATGGAAATGGTGCGGAATTGGTACTTAGGAATGAGAATTTGCATTCCAACTGGCAATTTGGTCACGAGAGATTTTTTAGGCTACTTTATTTTGAAGGAGATGGTAAAATTTCTATAGTTGTGTTTTTTTGTTACATAATTAAGGAGTTCCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTACAGTGTGTTGCCTTTTTATGCTCCCCGCTCCCTCTCCGGAAAGCTGAGGTGAAAGCACATTAGTATCATTTGGACACAGTGTAATTATTTAATTTAAATTGGAGCATGTCGAGTTTATTGTAATACAGTTCTAGGACGTTTTCTTGCTTAAATCCTTCATAAGTTTCTTGCATGTACAAATTCTGTACTCTCTTAAATGGATAACAGCATGTTATTTGCTTTAGTTGTTCATAATTTGCATATTTTCTTATTGCTTCTTGTCTCCTTGGTCATTGGAATAATGAATTTTGGTGTTCATCGAACTTTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGTATATATTTCCATTCAAGGCTTTGCTTCAGAATCCATCCTGATAATTCCATTTCGGGAATTCTTAATTAGTAATGTGATTATGTCTCACCTTCTTCTCAACGAGGCACTTAATGACATACTATGCTTAGCTTACTGTTTTATCAGAGCAAGACACCGAGCGGTGTGCCAACGAGGATACTAGGCCCCAAGGGGATAGATTGTGAGATCGCACGTTGGTTGGAGAGGGGAACAAAGCATTTCTTATAAGGGTGTAGTGTTAGAATAATTTTCTTTCGGTATAGTGCAAATTGGCTTCCTCAGCGGGATGCAAAAGCAACCCAGGCAACCACCTGAGAGAAGGTGCTTACCATAGACTAGTGCAGTCTCTGTCACCCATTGCAGTAGGCAATCACATAAGCTTGTCTCAAAATAAATCTCACAATAAGCTTCTCTCCTATTACGTTATGTGATCGTCAACAGCATTTCATTTTTAATTCTTTTTTTATATATTGCAATTTTTGGTCAATAACACTACCATTGTCTGAAATGTACAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTAATTCTCCTGCTTCTGAGAACGAAATAATACTTTTTATTCCTTTTTCAGTACATATATATTTTAAGGTATGGGCATGATTTCTTGGACAAGTTCAATATGATTACGGGGAGAACCTTCATTGAAACTAATGATATCTCAGTTTTGAAAAACCAACTTAGTTTGAATGTATAAGATATCGGAGTCCAAACAGGCAATGGCGGGTTTCAATTAAAAAAGAAAAAAGAAAAACATGAGTGATGAGAAAAAAATAATGGAAATGGAAGTGTTGATCATGATGGTTCGCATGATAGTAAATGTTATCGACATTATGTAATGTTTCATGCTATAAAATGATCTCCTCAATTTCCAATTTTATATGTTGGGACTTGTTTGAAGTGATGTATTGCTAGCCATTTGTGTCTGTATGCAGATGACTTTCCCTCTTAACATCGTGTCACTGGTCTGCTTGCATTATAATAGTTTTGCTTTATGCAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCCAAAAAGTAGGTATCTTCTGCTGCCAGGTTATTTTCTGGATCATATTTTAATGTTCTAATTAGATATAGGCTAAAAAGATACTTTTGGTCCATGAAGGTACTAACCTAGTTTTTGAACTTTAGTTTATAATAAATTAGCCTATACTTTGTGACAATTTAGTTTTTAAACTTAAGTGTCAATTTCTTTTTATAATTTTTATGATGGAAAGACTTTGTCTTGGTTGGTTATGAACACATTTGGTCCAAAATAAGTTAATCTATCAATACATGAAAAAATGTGATTACATATTTACAATACTAAATTGTTATAAATTTTTTAATCACGTACTAAAATTTAGGAATTAACAAGTTAAGTTTAGGAACTAATTTTTTTAAAATCTTAAATATATTTTATGAATGAAGAATCACCTGAAACACACGTTGGTTATACAACAGTTTTAATGTTAACTAGCCTAAACCCTTCTGTTATAACACTTTTAGTGACGTAGAAGTATAAATTTTTGGTTAAATTGTGACAATTCTGTTCGAGAATTTGATTGCGATAATTATTATAACTGGGAGATGGTTTGTACATTTTGCTATACATTGCTTATGGCGTCGTGGGTACAATTGTAAAATTTTTTGTAAGTTTGTGGTTAAATGCCCTCGTATTCCCTTCTAGTTTTTCTTTTTTATGCAATGGGATGGGAATGGGGTTTCACAGTCGTCGGGTTTTCATAGCTTTACAGAATGAATTTCTCTGGAGTTAACAAATAACATGTAATGCAGGACAAACATAATGGAAATTGCCAATTATCTATCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTAAAAACGGTGAGCAACACTTGTAACTAATCAAACCAACTTAACTCATCTTTTCTTCATCAGTAAATCTAAATAAAGGTTTTCTCTAGGCTGAGGAACAGAACCGGCATGTTCAAGGCCGTATTGATATCCTAAGGAAAGGAGTGCAAGATGCCTCGGCCATGGAAGATGCTGTTGAAAAGGTGCAGTTTTTATTTGGTTACCTTTTTCCACCTCTTCCAAATGGATAAATAATTTAAGAATGCTGACGAAAGTAAACTTTGATTGCCTATCAAACATCAGAAAATCCAGAATGCTAACCAAACATGCTTAAACCATTGCAAAGAATTCAAACTTAAGACATAGTTTCTAACCTGTATATTTGAACTCATGCAATCGTCCACAGCTAAGAAACAGATGCAGAGCTTATGCAGATGATGGCGTTAGCAGAACGACCTTCGATACTTAA

mRNA sequence

ATGGATAAGAAGCACGAGATTGGTACGCCGGTGAGCTCCAGCCAGATCGATCTGAAAAAGTCATTCAAGCTTGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTCCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCCAAAAAGACAAACATAATGGAAATTGCCAATTATCTATCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACCGGCATGTTCAAGGCCGTATTGATATCCTAAGGAAAGGAGTGCAAGATGCCTCGGCCATGGAAGATGCTGTTGAAAAGCTAAGAAACAGATGCAGAGCTTATGCAGATGATGGCGTTAGCAGAACGACCTTCGATACTTAA

Coding sequence (CDS)

ATGGATAAGAAGCACGAGATTGGTACGCCGGTGAGCTCCAGCCAGATCGATCTGAAAAAGTCATTCAAGCTTGCTGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTCCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCCAAAAAGACAAACATAATGGAAATTGCCAATTATCTATCCATGACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACCGGCATGTTCAAGGCCGTATTGATATCCTAAGGAAAGGAGTGCAAGATGCCTCGGCCATGGAAGATGCTGTTGAAAAGCTAAGAAACAGATGCAGAGCTTATGCAGATGATGGCGTTAGCAGAACGACCTTCGATACTTAA

Protein sequence

MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTFDT

Homology

[Close]

BLAST of Csor.00g242710 vs. NCBI nr
Match: XP_022931290.1 (uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata] >XP_023552810.1 uncharacterized protein LOC111810334 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6577107.1 hypothetical protein SDJN03_24681, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (911), Expect = 2.27e-123
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV
Sbjct: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180
           EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF
Sbjct: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180

Query: 181 DT 182
           DT
Sbjct: 181 DT 182

[Close]

BLAST of Csor.00g242710 vs. NCBI nr
Match: XP_022985332.1 (uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima])

HSP 1 Score: 351 bits (900), Expect = 1.08e-121
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQEYLHRLFIQV
Sbjct: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSRGEFRECFSRFTTAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVET+VGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN
Sbjct: 61  ITSLHGNIEDEFESLCVETKVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180
           EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF
Sbjct: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180

Query: 181 DT 182
           DT
Sbjct: 181 DT 182

[Close]

BLAST of Csor.00g242710 vs. NCBI nr
Match: KAG7015109.1 (hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349 bits (895), Expect = 7.45e-121
Identity = 182/187 (97.33%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV
Sbjct: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQ-----VGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLS 120
           ITSLHGNIEDEFESLCVETQ     VGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLS
Sbjct: 61  ITSLHGNIEDEFESLCVETQFCFMQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLS 120

Query: 121 MTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGV 180
           MTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGV
Sbjct: 121 MTKKNEIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGV 180

Query: 181 SRTTFDT 182
           SRTTFDT
Sbjct: 181 SRTTFDT 187

[Close]

BLAST of Csor.00g242710 vs. NCBI nr
Match: XP_038876216.1 (uncharacterized protein LOC120068468 [Benincasa hispida])

HSP 1 Score: 313 bits (802), Expect = 9.08e-107
Identity = 162/182 (89.01%), Postives = 171/182 (93.96%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           M+KK EI TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFS+FT AEQEYLHRLFIQV
Sbjct: 1   MEKKREIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSKFTMAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQ+LDPLYSKKTNIMEIAN+LS+TKKN
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQELDPLYSKKTNIMEIANFLSITKKN 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180
           EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR RCRAY  DGV+ T F
Sbjct: 121 EIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDASCMADAVKKLRKRCRAYGTDGVNET-F 180

Query: 181 DT 182
           DT
Sbjct: 181 DT 181

[Close]

BLAST of Csor.00g242710 vs. NCBI nr
Match: XP_008451872.1 (PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo] >KAA0040183.1 uncharacterized protein E6C27_scaffold118G00190 [Cucumis melo var. makuwa] >TYK16453.1 uncharacterized protein E5676_scaffold21G002510 [Cucumis melo var. makuwa])

HSP 1 Score: 303 bits (775), Expect = 1.27e-102
Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQV
Sbjct: 1   MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNI+EI+N+LSM K  
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIVEISNFLSMKKME 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 178
           EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Sbjct: 121 EIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET 178

[Close]

BLAST of Csor.00g242710 vs. ExPASy TrEMBL
Match: A0A6J1EZ15 (uncharacterized protein LOC111437518 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437518 PE=4 SV=1)

HSP 1 Score: 355 bits (911), Expect = 1.10e-123
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV
Sbjct: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180
           EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF
Sbjct: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180

Query: 181 DT 182
           DT
Sbjct: 181 DT 182

[Close]

BLAST of Csor.00g242710 vs. ExPASy TrEMBL
Match: A0A6J1J4K9 (uncharacterized protein LOC111483373 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483373 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 5.23e-122
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQEYLHRLFIQV
Sbjct: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSRGEFRECFSRFTTAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVET+VGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN
Sbjct: 61  ITSLHGNIEDEFESLCVETKVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180
           EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF
Sbjct: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRTTF 180

Query: 181 DT 182
           DT
Sbjct: 181 DT 182

[Close]

BLAST of Csor.00g242710 vs. ExPASy TrEMBL
Match: A0A5A7TAS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002510 PE=4 SV=1)

HSP 1 Score: 303 bits (775), Expect = 6.14e-103
Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQV
Sbjct: 1   MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNI+EI+N+LSM K  
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIVEISNFLSMKKME 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 178
           EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Sbjct: 121 EIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET 178

[Close]

BLAST of Csor.00g242710 vs. ExPASy TrEMBL
Match: A0A1S3BTB0 (uncharacterized protein LOC103493030 OS=Cucumis melo OX=3656 GN=LOC103493030 PE=4 SV=1)

HSP 1 Score: 303 bits (775), Expect = 6.14e-103
Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQV
Sbjct: 1   MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNI+EI+N+LSM K  
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIVEISNFLSMKKME 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 178
           EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Sbjct: 121 EIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET 178

[Close]

BLAST of Csor.00g242710 vs. ExPASy TrEMBL
Match: A0A6J1C7G2 (uncharacterized protein LOC111008110 OS=Momordica charantia OX=3673 GN=LOC111008110 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 1.16e-102
Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 0


Query: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60
           M+KKHE+ TP SSS +DLKKSFKLAVRSLLTSCSREEFRECF RFT AEQEYLHRLFIQV
Sbjct: 1   MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120
           ITSLHGNIEDEFESLC+ETQVG +LDNVEQLLEEQ LDPLYSKKTNIM+IANYLSMTKKN
Sbjct: 61  ITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPLYSKKTNIMDIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAYADDGVSRT 178
           EIQ LKDMLKTAEEQN+HVQ RID+LRKGVQD S   DAVEKL NRCRAYA DGV+ T
Sbjct: 121 EIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKLWNRCRAYATDGVNET 178

[Close]

BLAST of Csor.00g242710 vs. TAIR 10
Match: AT4G19350.1 (embryo defective 3006 )

HSP 1 Score: 152.5 bits (384), Expect = 3.2e-37
Identity = 81/158 (51.27%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 13  SSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVITSLHGNIEDEF 72
           S +  LKKSFK  +R LLT+CS+++F + FS+F+ AEQE L +L+ +V+ +LH  IE+EF
Sbjct: 13  SRRTHLKKSFKSTLRHLLTACSKQDFVDIFSKFSGAEQELLFQLYTRVVVNLHQTIEEEF 72

Query: 73  ESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKNEIQHLKDMLKTA 132
           +  C ETQVG +LD VE+L+EEQ LDPL+S KT++M IA  L+ +KKNEIQ L  +L+ A
Sbjct: 73  DEQCHETQVGPILDTVEELVEEQSLDPLFSDKTDVMAIAYDLTTSKKNEIQKLTVLLQRA 132

Query: 133 EEQNRHVQGRIDILRKGVQDASAMEDAVEKLRNRCRAY 171
           EEQNR  + RI +L+K  QD S   D +EKL      Y
Sbjct: 133 EEQNRQKEARISMLKKQTQDLSGTADRIEKLNAGVSGY 170

The following BLAST results are available for this feature:

BLAST of Csor.00g242710 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g242710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931290.1	2.27e-123	100.00	uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata] >XP_0235528...	[more]
XP_022985332.1	1.08e-121	98.90	uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]	[more]
KAG7015109.1	7.45e-121	97.33	hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038876216.1	9.08e-107	89.01	uncharacterized protein LOC120068468 [Benincasa hispida]	[more]
XP_008451872.1	1.27e-102	86.52	PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo] >KAA0040183.1 unc...	[more]

BLAST of Csor.00g242710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZ15	1.10e-123	100.00	uncharacterized protein LOC111437518 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J4K9	5.23e-122	98.90	uncharacterized protein LOC111483373 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TAS4	6.14e-103	86.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BTB0	6.14e-103	86.52	uncharacterized protein LOC103493030 OS=Cucumis melo OX=3656 GN=LOC103493030 PE=...	[more]
A0A6J1C7G2	1.16e-102	85.96	uncharacterized protein LOC111008110 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of Csor.00g242710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19350.1	3.2e-37	51.27	embryo defective 3006	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..173
None	No IPR available	COILS	Coil	Coil	coord: 115..142
None	No IPR available	PANTHER	PTHR15459:SF3	POLYAMINE-MODULATED FACTOR 1	coord: 11..170
IPR007128	Nuclear MIS12/MIND complex subunit PMF1/Nnf1	PFAM	PF03980	Nnf1	coord: 54..147 e-value: 2.4E-7 score: 31.1
IPR007128	Nuclear MIS12/MIND complex subunit PMF1/Nnf1	PANTHER	PTHR15459	POLYAMINE-MODULATED FACTOR 1	coord: 11..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g242710.m01	Csor.00g242710.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
cellular_component	GO:0000818	nuclear MIS12/MIND complex