Csor.00g242650 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGCGGCAGGAATTGTCTGCGGCGGACTATGACCATAAAGTTAGGCCCCCACTCCACCCGATCACTGTCAATCACTTTCTTCACGCATCACGCATCCTCACCGTCCATTTCCATCGCCCATGATCACGATCATCCATTGGTGACTCAAGCTGTAATGCATCCGATTCCCCCTCCCCTCGTGTGCGTATTATGCACAACGATTTAGTCATATTTACGATCGCGAAAATAAAAAATAAATAAAAATACAATTTTCTTTAGAATTTCTTCCATTTAATCCCTCCATTTTTTTTTTCAATTTTTGTCTCTGATAAATTAGCCAACATTTTCCTTGTTCATACTCAAATTAATATCAATACATAATTCCCATAGAATTTCATTTTTTTTTCTCTTTTCTTTTTTCATAAATAAAAAATAGCTTTATATTAATAAGTAAAAGTTCCTATTTATTTCCGTGCCTTTGTTCTTTTTTTTTTTTTTTTTTTTTCTTTTATGATAAAAACGCTTAAAAGTTAATAGAGAAAGACCAATTATATTTATTTAATCGATTTAAATGATTTTTTTTTTCGGTAAATTAAAAGTTTCAAATACAACCTTTAAAATTTCAGAAAGAAGATAACCTTTTCAAAAAGTAAAGGATTTTCTTTAAAATAGAAGAACAAGTAAATAATTCTTTGCTTTTTTTAATTATGGAATAAAACTCGAATATTTGATCATATTTTTAATAAATATACAAATATTTTATGTAGGCTGCAAATTCTAATATATAACAAAAATCTGATCTAATTTATAATCATATTGTTAAATTGTGTTATATAATAATATACCATTAGTTTTTTATTTTATTAAATTTAGTTTTTAGGAGGATAAAACAACTGCAACACATGTGAGGATCAAATTATAATATTAAAAAGAATAGTTCAATCATACTATATAAAATTAATTGAGATATAATAAATTTTTTTTAAAATTTCAAAACATTTGCAATTTCTAAAAAGGAAAAACATTTGGGAGTTTATTCCCTACCATTATTCTATTCTCAATTTAAAATAAAATAAAATAGGAGAGAAGCAGTATAAAAATTATACAGTGGGCATCCATCCACCCAATAATTTCTCGTATTATTATTACTTTCTTTTTCACCTCACCTACATTTATGTAGCACATTGGAGACGGAGCGCGTAGGGCCCACAACGCAAAGATTCGCCATTTCTGTCAGCAGTATTCGGGTCAGGTCGGGTCGAAAAATATCTTCTTTATTTTTACATTAAAATTTTGTTTAAATTAAACTTATTCATTTAATTTTTTAAAAATCTAAATTAGTTGAATAATATGTAATAGAAGATGGTACGTAAATAATAAATATATTCTTAAAATTAGGAACAATACTAATAAACGCTAACTTTATTTATATATATAAAAAAAAAACAATAAACTAACTATAAAAACTGTTTATTAAAAATATATTAACTAAAATTAAACATTTAATTGGCGTTCGTATTTGGGTATGTGTGTCGGTTATCGGGTTGGACGCTCAAAATCGGAATGGCCTGTAAATATGATATACTGTTATTAACAACATCTCTATATTCTCCTATATAAACATTTCGATTTCCAGAAGTAACAAACAACCCGGCTCCCATTTTCCCCCATTAAACCTCTCAAGATCCTTCGTTACCAAGAAAAATTAAAGCCGTTTGATTCTCCATTCCTGACTTTTCTTCTTCGCTTTCTGTTTCAGGTATTTTGAGGAAACTTTTCTTTTCCTTTTCTTCTTTTATGAATGCTGCTGGGTTCTTCTTGTTCCCACTAATTATTGTTCCATTTTCATGTGCGTTTTCTTTCTTGAATCTACTTTTTTGTTTCCCTTCGTTGTTAAGCTATTTCTTGTGTTATTTAGTTAATCTTCTGTCTGATTATTCAGTTCTATGTCTCTTCCTCTGTGTTTGATGTGAGTAATGTGTTGATTTTTCAATAGATTTCTTGTTTGTTCTTGTTTTAGTCCATTTGCGTTGGTTGTTGATGAACAAACAAGATGAATCCATTTCTAGATTCTTATTTTTTTCGGATTTTTTATCGTAGCTGTTATGTGAATGGCTATTGGCTATCTGTGCAGGAAGAAGATGGCCAGAGAAGACTTCGGTTTATGGCTATTCTTGGTTGCATCTCTGCAGTTTTTCCTTAGAACACAGTGTATTAATGTGGGGATTACTTATGTTCAAGAAGCTGGTATCAAAGGAGGCGGTAAGAAACTCGAGCATCTTGAAATCACTTTTGGTTTCATTATTGGTTTCGTGATTTGTGAACAACCGTGCAGTTTGTTTGGATGGAAGTCCTCCAGCGTATCATTTCAGCGAAGGGTTCGGCGCTGGGATCGATAATTGGTTGATACAACTCGAGGTTTGTTCTTTCTCTCAGAGCTGAAGAAATTAAGTGTTTGTTGTGGTAATTTCAACTTCATTTGATTCACAGGGAGGAGGATGGTGCAACAATGTCACGACCTGTCTCCAACGCAGGGACACTCGTTTAGGCTCGTCTAGGAAAATGGTTAAAGTTCTTGCGTTCTCGGGGATTTTGACCAATAAACAAAAATTCAATCCAGGTTTGGCCTTAGATGAACAATATGATTTGATTGATCGGTTCACTCTTTATCTCAATTATACCAACAATTCTTCCACGCCACAGATTTTTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTCACTGGAGATGTTGAAGCGGTTGATCCTGTAAGTCTCAGTTGTTTCGAGATTAAAGTTTAGATTCATTTCTGAAATAGTGATGAATCTTTGGATCAGGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATTGATAACTTACTCGCCAAAGGAATGAAGAATGCGAAGAACGTATGAACTGAACTTTCTTCTTTGTTATACACATCATAATCATTAGGGATCTATCTGATGTTGCTGATACTATAGGCTATTCTCTCCGGTTGTTCCGCGGGCGGATTAAGTTCGATTTTGAATTGTGATCATTTCAAATCTCTACTTCCTTCTACTACTAAAGTAAAGTGCCTCTCAGATGCCGGATACTTCATTAACGCGTAAGCTCGTGTTGCTTGTTTTATCTTGTCTTTCTTTGTTCGTGTAATATTCCAAGTCCACCGTTAGTAGATATTGTCTTTTTCGGACTTTCCCTTTCGAGCTTCCTCTCAAAATTTTTAAAACGCGTTTGCTGGGGAGAGGTTCGTTTCGCACTCCAACCGATGTGGGGCATAGTGTCATCGATGACACACAATCCGGAATCTGACTTTGATACCATTTGTAATAGTCAAAGTTCACCGCTAGCATATATTGTGTTCTTTGGGCTTTCTGTTTCGGGCTTTCCCCAAGATTTTTTAAAACGGAGAATGTGAGATCCTACATTTGTTGGAGATGGGAACAAACCATTTCTTATAAGGGTGTGGAAACCTCTCCGTAGTAGACACGTTCCAAAACTGTGAGACTGACGGCGATACATAATGTGTCAAAAGTAGACAATATCTACTTGGGCTGTTACATTGGTATCATAGCCAGACACCCTCGCTGGGGTCCCTAAGGAGGATGGATGGTGAGATCTCACATTAGTTGGAGAGGGGAACGAATCATTCCATATAAGGGTGAGGAAACTTCTTCCTAGTAGACACATTTTAAAATTGTGAGGCTACTTGGCACAGCTGCAAGCTCGACATCAAGAACTGCTCGCCTATTCAGCTACGAACCATGCAAGGTAGTAGAACATCAAGCTCAGCAGTCTTCAAACTGTTTGAGAAAGTGTTTTATTCTAATCTTTCTGGTTTTGGATTAGATTTCAGGGTTCAGTTCTTGAGTGCATTGAATGGCGTTGGAAGTTCTTTATCTAGAGGATTGTTCATAGATTCTTGCTATGCTCATTGCCAAACCGAAACGCAGGAGACATGGCTACGAGCAGACTCTCCCACGCTGAGTAAGACGGTAAGTAATCAACATGAATGCCATTGCCTTTGCCATTGTTCTTCAAACTATACCAACTCTTTTCATGAATTGTTCTTCAAACTATACCAACTCTTTTCATGCCATTGCCTTTGCCATTGTTCTTCAAACTAGACCATTGCAAAAGCAGTTGGAGACTGGTATTTCGACAGGAGTCCGTTCCAGAAGATCGATTGTCCTTACCCGTGCAACCCGACATGCCACAACCGCATTTTCGAAGCCAAAGACAACCTCGAATGA ATGGGAGGCGGCAGGAATTGTCTGCGGCGGACTATGACCATAAAGTTAGGCCCCCACTCCACCCGATCACTGTCAATCACTTTCTTCACGCATCACGCATCCTCACCGTCCATTTCCATCGCCCATGATCACGATCATCCATTGGTGACTCAAGCTATCCTTCGTTACCAAGAAAAATTAAAGCCGTTTGATTCTCCATTCCTGACTTTTCTTCTTCGCTTTCTGTTTCAGGAAGAAGATGGCCAGAGAAGACTTCGGTTTATGGCTATTCTTGAAGCTGGTATCAAAGGAGGCGTTTGTTTGGATGGAAGTCCTCCAGCGTATCATTTCAGCGAAGGGTTCGGCGCTGGGATCGATAATTGGTTGATACAACTCGAGGGAGGAGGATGGTGCAACAATGTCACGACCTGTCTCCAACGCAGGGACACTCGTTTAGGCTCGTCTAGGAAAATGGTTAAAGTTCTTGCGTTCTCGGGGATTTTGACCAATAAACAAAAATTCAATCCAGATTTTTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTCACTGGAGATGTTGAAGCGGTTGATCCTGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATTGATAACTTACTCGCCAAAGGAATGAAGAATGCGAAGAACGCTATTCTCTCCGGTTGTTCCGCGGGCGGATTAAGTTCGATTTTGAATTGTGATCATTTCAAATCTCTACTTCCTTCTACTACTAAAGTAAAGTGCCTCTCAGATGCCGGATACTTCATTAACGCCTGCAAGCTCGACATCAAGAACTGCTCGCCTATTCAGCTACGAACCATGCAAGATTTCAGGGTTCAGTTCTTGAGTGCATTGAATGGCGTTGGAAGTTCTTTATCTAGAGGATTGTTCATAGATTCTTGCTATGCTCATTGCCAAACCGAAACGCAGGAGACATGGCTACGAGCAGACTCTCCCACGCTGAGTAAGACGACCATTGCAAAAGCAGTTGGAGACTGGTATTTCGACAGGAGTCCGTTCCAGAAGATCGATTGTCCTTACCCGTGCAACCCGACATGCCACAACCGCATTTTCGAAGCCAAAGACAACCTCGAATGA ATGGGAGGCGGCAGGAATTGTCTGCGGCGGACTATGACCATAAAGTTAGGCCCCCACTCCACCCGATCACTGTCAATCACTTTCTTCACGCATCACGCATCCTCACCGTCCATTTCCATCGCCCATGATCACGATCATCCATTGGTGACTCAAGCTATCCTTCGTTACCAAGAAAAATTAAAGCCGTTTGATTCTCCATTCCTGACTTTTCTTCTTCGCTTTCTGTTTCAGGAAGAAGATGGCCAGAGAAGACTTCGGTTTATGGCTATTCTTGAAGCTGGTATCAAAGGAGGCGTTTGTTTGGATGGAAGTCCTCCAGCGTATCATTTCAGCGAAGGGTTCGGCGCTGGGATCGATAATTGGTTGATACAACTCGAGGGAGGAGGATGGTGCAACAATGTCACGACCTGTCTCCAACGCAGGGACACTCGTTTAGGCTCGTCTAGGAAAATGGTTAAAGTTCTTGCGTTCTCGGGGATTTTGACCAATAAACAAAAATTCAATCCAGATTTTTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTCACTGGAGATGTTGAAGCGGTTGATCCTGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATTGATAACTTACTCGCCAAAGGAATGAAGAATGCGAAGAACGCTATTCTCTCCGGTTGTTCCGCGGGCGGATTAAGTTCGATTTTGAATTGTGATCATTTCAAATCTCTACTTCCTTCTACTACTAAAGTAAAGTGCCTCTCAGATGCCGGATACTTCATTAACGCCTGCAAGCTCGACATCAAGAACTGCTCGCCTATTCAGCTACGAACCATGCAAGATTTCAGGGTTCAGTTCTTGAGTGCATTGAATGGCGTTGGAAGTTCTTTATCTAGAGGATTGTTCATAGATTCTTGCTATGCTCATTGCCAAACCGAAACGCAGGAGACATGGCTACGAGCAGACTCTCCCACGCTGAGTAAGACGACCATTGCAAAAGCAGTTGGAGACTGGTATTTCGACAGGAGTCCGTTCCAGAAGATCGATTGTCCTTACCCGTGCAACCCGACATGCCACAACCGCATTTTCGAAGCCAAAGACAACCTCGAATGA MGGGRNCLRRTMTIKLGPHSTRSLSITFFTHHASSPSISIAHDHDHPLVTQAILRYQEKLKPFDSPFLTFLLRFLFQEEDGQRRLRFMAILEAGIKGGVCLDGSPPAYHFSEGFGAGIDNWLIQLEGGGWCNNVTTCLQRRDTRLGSSRKMVKVLAFSGILTNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAIIDNLLAKGMKNAKNAILSGCSAGGLSSILNCDHFKSLLPSTTKVKCLSDAGYFINACKLDIKNCSPIQLRTMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTETQETWLRADSPTLSKTTIAKAVGDWYFDRSPFQKIDCPYPCNPTCHNRIFEAKDNLE Homology
BLAST of Csor.00g242650 vs. ExPASy Swiss-Prot
Match: Q6DBP4 (Pectin acetylesterase 8 OS=Arabidopsis thaliana OX=3702 GN=PAE8 PE=2 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 2.0e-115 Identity = 200/364 (54.95%), Postives = 242/364 (66.48%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy Swiss-Prot
Match: Q9FH82 (Pectin acetylesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PAE11 PE=2 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 1.3e-93 Identity = 173/365 (47.40%), Postives = 215/365 (58.90%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy Swiss-Prot
Match: Q940J8 (Pectin acetylesterase 7 OS=Arabidopsis thaliana OX=3702 GN=PAE7 PE=2 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.8e-93 Identity = 171/350 (48.86%), Postives = 214/350 (61.14%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy Swiss-Prot
Match: O80731 (Pectin acetylesterase 3 OS=Arabidopsis thaliana OX=3702 GN=PAE3 PE=2 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 8.8e-87 Identity = 158/361 (43.77%), Postives = 207/361 (57.34%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy Swiss-Prot
Match: Q9SFF6 (Pectin acetylesterase 12 OS=Arabidopsis thaliana OX=3702 GN=PAE12 PE=2 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.7e-86 Identity = 155/362 (42.82%), Postives = 204/362 (56.35%), Query Frame = 0
BLAST of Csor.00g242650 vs. NCBI nr
Match: KAG6577113.1 (Pectin acetylesterase 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 777 bits (2006), Expect = 7.41e-284 Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
BLAST of Csor.00g242650 vs. NCBI nr
Match: KAG7015115.1 (Pectin acetylesterase 8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 562 bits (1448), Expect = 1.82e-198 Identity = 283/367 (77.11%), Postives = 284/367 (77.38%), Query Frame = 0
BLAST of Csor.00g242650 vs. NCBI nr
Match: XP_022136630.1 (pectin acetylesterase 8-like isoform X2 [Momordica charantia] >XP_022136631.1 pectin acetylesterase 8-like isoform X2 [Momordica charantia]) HSP 1 Score: 523 bits (1347), Expect = 4.20e-183 Identity = 263/367 (71.66%), Postives = 272/367 (74.11%), Query Frame = 0
BLAST of Csor.00g242650 vs. NCBI nr
Match: XP_022136629.1 (pectin acetylesterase 8-like isoform X1 [Momordica charantia]) HSP 1 Score: 523 bits (1347), Expect = 9.88e-183 Identity = 263/367 (71.66%), Postives = 272/367 (74.11%), Query Frame = 0
BLAST of Csor.00g242650 vs. NCBI nr
Match: XP_011653238.1 (pectin acetylesterase 8 isoform X3 [Cucumis sativus] >KGN53459.1 hypothetical protein Csa_014451 [Cucumis sativus]) HSP 1 Score: 520 bits (1338), Expect = 9.82e-182 Identity = 261/367 (71.12%), Postives = 274/367 (74.66%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy TrEMBL
Match: A0A6J1C417 (Pectin acetylesterase OS=Momordica charantia OX=3673 GN=LOC111008290 PE=3 SV=1) HSP 1 Score: 523 bits (1347), Expect = 2.04e-183 Identity = 263/367 (71.66%), Postives = 272/367 (74.11%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy TrEMBL
Match: A0A6J1C4V3 (Pectin acetylesterase OS=Momordica charantia OX=3673 GN=LOC111008290 PE=3 SV=1) HSP 1 Score: 523 bits (1347), Expect = 4.78e-183 Identity = 263/367 (71.66%), Postives = 272/367 (74.11%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy TrEMBL
Match: A0A0A0KX83 (Pectin acetylesterase OS=Cucumis sativus OX=3659 GN=Csa_4G056500 PE=3 SV=1) HSP 1 Score: 520 bits (1338), Expect = 4.76e-182 Identity = 261/367 (71.12%), Postives = 274/367 (74.66%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy TrEMBL
Match: A0A1S3BTA0 (Pectin acetylesterase OS=Cucumis melo OX=3656 GN=LOC103493023 PE=3 SV=1) HSP 1 Score: 518 bits (1334), Expect = 1.93e-181 Identity = 259/367 (70.57%), Postives = 274/367 (74.66%), Query Frame = 0
BLAST of Csor.00g242650 vs. ExPASy TrEMBL
Match: A0A1S3BSG1 (Pectin acetylesterase OS=Cucumis melo OX=3656 GN=LOC103493023 PE=3 SV=1) HSP 1 Score: 518 bits (1334), Expect = 2.15e-181 Identity = 259/367 (70.57%), Postives = 274/367 (74.66%), Query Frame = 0
BLAST of Csor.00g242650 vs. TAIR 10
Match: AT4G19420.1 (Pectinacetylesterase family protein ) HSP 1 Score: 417.2 bits (1071), Expect = 1.4e-116 Identity = 200/364 (54.95%), Postives = 242/364 (66.48%), Query Frame = 0
BLAST of Csor.00g242650 vs. TAIR 10
Match: AT4G19420.2 (Pectinacetylesterase family protein ) HSP 1 Score: 412.5 bits (1059), Expect = 3.5e-115 Identity = 197/355 (55.49%), Postives = 238/355 (67.04%), Query Frame = 0
BLAST of Csor.00g242650 vs. TAIR 10
Match: AT5G45280.2 (Pectinacetylesterase family protein ) HSP 1 Score: 344.7 bits (883), Expect = 9.1e-95 Identity = 173/365 (47.40%), Postives = 215/365 (58.90%), Query Frame = 0
BLAST of Csor.00g242650 vs. TAIR 10
Match: AT4G19410.1 (Pectinacetylesterase family protein ) HSP 1 Score: 343.6 bits (880), Expect = 2.0e-94 Identity = 171/350 (48.86%), Postives = 214/350 (61.14%), Query Frame = 0
BLAST of Csor.00g242650 vs. TAIR 10
Match: AT2G46930.1 (Pectinacetylesterase family protein ) HSP 1 Score: 322.0 bits (824), Expect = 6.3e-88 Identity = 158/361 (43.77%), Postives = 207/361 (57.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|