Csor.00g241830 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g241830
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 11122537 .. 11123154 (-)
RNA-Seq ExpressionCsor.00g241830
SyntenyCsor.00g241830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACGAAGAAATGGGCTGGGCTTAGGTCTGGATTCGGTCGTGGAACTTGAAACACAAAGACCGCGCAACAGCAATAGCAACCGGTATGTAGCCGGTAGCAGGTAAGGAGAAAAGGAAATCGCACAGTTGGTGAAATGAAAATTGAAGACATGCCATAATTATTGCAATTGTTCGGCAACCAGCAATTTGTTTGACGCTCATTTGCGCTTCCTTTCACTTCCCGCCGGAGTATGCGCCATTTCCTCTCCGATCACACGGTTTCTGTACCTTTCTTTTTCTCTATTTGCGTTCAACTATTAGACATCGCGAGGTTGTCATTTTCATTTCCATTTTTTACAGGAATCGCTGGAGCTTAGTCTATGGTTGGATTGAATCAGGCTGAGGGTGAACAGCGGCGCTGCCTTGTTTTCATCGCGTCAAAACTGTACCAGAACAACCGATTCCTAATTTTTCAGGAGAAACTAAGGATTCAAGAGTGAGAATCTGCGCTTTGTTAGTCTTAGTCTTCTTCCCTTTGTTCTTGATCAACTCCTATATTTTTTAAGTTCATTTTTAGAATTTGTTTTTAAGCACAATTTGGCTTATCAGCGTCCGAAAGCGAGGGCAGCGATTTGA

mRNA sequence

ATGAGACGAAGAAATGGGCTGGGCTTAGGTCTGGATTCGGTCGTGGAACTTGAAACACAAAGACCGCGCAACAGCAATAGCAACCGGTATGTAGCCGGTAGCAGCAATTTGTTTGACGCTCATTTGCGCTTCCTTTCACTTCCCGCCGGAGTATGCGCCATTTCCTCTCCGATCACACGGAATCGCTGGAGCTTAGTCTATGGAGAAACTAAGGATTCAAGACGTCCGAAAGCGAGGGCAGCGATTTGA

Coding sequence (CDS)

ATGAGACGAAGAAATGGGCTGGGCTTAGGTCTGGATTCGGTCGTGGAACTTGAAACACAAAGACCGCGCAACAGCAATAGCAACCGGTATGTAGCCGGTAGCAGCAATTTGTTTGACGCTCATTTGCGCTTCCTTTCACTTCCCGCCGGAGTATGCGCCATTTCCTCTCCGATCACACGGAATCGCTGGAGCTTAGTCTATGGAGAAACTAAGGATTCAAGACGTCCGAAAGCGAGGGCAGCGATTTGA

Protein sequence

MRRRNGLGLGLDSVVELETQRPRNSNSNRYVAGSSNLFDAHLRFLSLPAGVCAISSPITRNRWSLVYGETKDSRRPKARAAI
Homology
[Close]
BLAST of Csor.00g241830 vs. NCBI nr
Match: KAG6599526.1 (hypothetical protein SDJN03_09304, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164 bits (416), Expect = 4.27e-51
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MRRRNGLGLGLDSVVELETQRPRNSNSNRYVAGSSNLFDAHLRFLSLPAGVCAISSPITR 60
          MRRRNGLGLGLDSVVELETQRPRNSNSNRYVAGSSNLFDAHLRFLSLPAGVCAISSPITR
Sbjct: 1  MRRRNGLGLGLDSVVELETQRPRNSNSNRYVAGSSNLFDAHLRFLSLPAGVCAISSPITR 60

Query: 61 NRWSLVYGETKDSRRPKARAAI 82
          NRWSLVYGETKDSRRPKARAAI
Sbjct: 61 NRWSLVYGETKDSRRPKARAAI 82

[Close]
BLAST of Csor.00g241830 vs. NCBI nr
Match: KAG7030503.1 (hypothetical protein SDJN02_08850, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119 bits (298), Expect = 8.65e-31
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1   MRRRNGLGLGLDSVVELETQRPRNSNSNRYVAGSSNLFDAHLRFLSLPAGVCAISSPITR 60
           MRRRNGLGLGLDSVVELETQRPRNSNSNRYVAGSSNLFDAHLRFLSLPAGVCAISSPI+R
Sbjct: 197 MRRRNGLGLGLDSVVELETQRPRNSNSNRYVAGSSNLFDAHLRFLSLPAGVCAISSPISR 256

The following BLAST results are available for this feature:
BLAST of Csor.00g241830 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g241830 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599526.14.27e-51100.00hypothetical protein SDJN03_09304, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7030503.18.65e-3198.33hypothetical protein SDJN02_08850, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g241830 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g241830 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g241830.m01Csor.00g241830.m01mRNA