Csor.00g241700 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g241700
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 11177841 .. 11178682 (+)
RNA-Seq ExpressionCsor.00g241700
SyntenyCsor.00g241700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTCAAAAGAGGAAGATTGGTTGTAGGCAATACGGAAAACAGAGGGTGTGATGGAAAGGGGAAGAGGAGGAAAGGGAGGGAAATTACAGGTTTGACACTCATGGGAGGCAGTAATGGTAATGGTAATGGTAAAGGTGAAAAAGGCTGCTCTGAAATGGCCATATGGGAGTGTCTGTTTTGTACGAACCCATTTAGCAAAATTTAAGGCGTCTGTGATGAATTTGAGTAGATGGAGTTGAAGGGGGTGGGGGGAGAATTTTGGAGGAGTGAGAAGAGCCCATGTGGATGCGTGTGTGGATCTTTCAGTGATTTTTGTCTTTGCCTTCTCTGGGTCTCTGCCGCTGCCCTGCGCTGGTGACTCACCACTCCACCCACTGCATTGCAGAGCAAAGAAAGCAAGAGAGCAAGAAAGAAGCGAAAAGCACGATGGAAGCAACCATCTCAGACCCCACGTGAGCACTACGTAGGAGAGAGACAGAGATATTCAAACACATACTCTACACTCAACTTCACTTCAAACACAAACACATTCACTCACAAAGTTTTCAACCCAAGCAACTCATTTTTTTTTTTTTTTTATCATTAAAACAGATTCGGACTCTGTGCTCACAGCAAATCAGCAGAAATAAAGCCTTTCCCGACATTGCTACTCTTCCTATACGTTTTGTTCTTCGTTTCGTTTTCTGGGCAACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGTTCTTCCACTCTCCTTTGCCCAGCTTTCTTGTGGAAATTGCTAGCTCGAACAAGAAGAGGGAAAAGGGGCATGCCACAATCATTGGATACACAAACACCAGCTAA

mRNA sequence

ATGGGGTTCAAAAGAGGAAGATTGGTTGTAGGCAATACGGAAAACAGAGGGTGTGATGGAAAGGGGAAGAGGAGGAAAGGGAGGGAAATTACAGGTTTGACACTCATGGGAGGCAGTAATGGTAATGGTAATGGTAAAGGTGAAAAAGGCTGCTCTGAAATGGCCATATGGGAGTGTCTGTTTTTGATTTTTGTCTTTGCCTTCTCTGGGTCTCTGCCGCTGCCCTGCGCTGGTGACTCACCACTCCACCCACTGCATTGCAGAGCAAAGAAAGCAAGAGAGCAAGAAAGAAGCGAAAAGCACGATGGAAGCAACCATCTCAGACCCCACATTCGGACTCTGTGCTCACAGCAAATCAGCAGAAATAAAGCCTTTCCCGACATTGCTACTCTTCCTATACGTTTTGTTCTTCGTTTCGTTTTCTGGGCAACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGTTCTTCCACTCTCCTTTGCCCAGCTTTCTTGTGGAAATTGCTAGCTCGAACAAGAAGAGGGAAAAGGGGCATGCCACAATCATTGGATACACAAACACCAGCTAA

Coding sequence (CDS)

ATGGGGTTCAAAAGAGGAAGATTGGTTGTAGGCAATACGGAAAACAGAGGGTGTGATGGAAAGGGGAAGAGGAGGAAAGGGAGGGAAATTACAGGTTTGACACTCATGGGAGGCAGTAATGGTAATGGTAATGGTAAAGGTGAAAAAGGCTGCTCTGAAATGGCCATATGGGAGTGTCTGTTTTTGATTTTTGTCTTTGCCTTCTCTGGGTCTCTGCCGCTGCCCTGCGCTGGTGACTCACCACTCCACCCACTGCATTGCAGAGCAAAGAAAGCAAGAGAGCAAGAAAGAAGCGAAAAGCACGATGGAAGCAACCATCTCAGACCCCACATTCGGACTCTGTGCTCACAGCAAATCAGCAGAAATAAAGCCTTTCCCGACATTGCTACTCTTCCTATACGTTTTGTTCTTCGTTTCGTTTTCTGGGCAACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGTTCTTCCACTCTCCTTTGCCCAGCTTTCTTGTGGAAATTGCTAGCTCGAACAAGAAGAGGGAAAAGGGGCATGCCACAATCATTGGATACACAAACACCAGCTAA

Protein sequence

MGFKRGRLVVGNTENRGCDGKGKRRKGREITGLTLMGGSNGNGNGKGEKGCSEMAIWECLFLIFVFAFSGSLPLPCAGDSPLHPLHCRAKKAREQERSEKHDGSNHLRPHIRTLCSQQISRNKAFPDIATLPIRFVLRFVFWATSSSSSSSSSSSSMFFHSPLPSFLVEIASSNKKREKGHATIIGYTNTS
Homology
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BLAST of Csor.00g241700 vs. NCBI nr
Match: KAG6599539.1 (hypothetical protein SDJN03_09317, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381 bits (978), Expect = 2.74e-133
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 

Query: 1   MGFKRGRLVVGNTENRGCDGKGKRRKGREITGLTLMGGSNGNGNGKGEKGCSEMAIWECL 60
           MGFKRGRLVVGNTENRGCDGKGKRRKGREITGLTLMGGSNGNGNGKGEKGCSEMAIWECL
Sbjct: 1   MGFKRGRLVVGNTENRGCDGKGKRRKGREITGLTLMGGSNGNGNGKGEKGCSEMAIWECL 60

Query: 61  FLIFVFAFSGSLPLPCAGDSPLHPLHCRAKKAREQERSEKHDGSNHLRPHIRTLCSQQIS 120
           FLIFVFAFSGSLPLPCAGDSPLHPLHCRAKKAREQERSEKHDGSNHLRPHIRTLCSQQIS
Sbjct: 61  FLIFVFAFSGSLPLPCAGDSPLHPLHCRAKKAREQERSEKHDGSNHLRPHIRTLCSQQIS 120

Query: 121 RNKAFPDIATLPIRFVLRFVFWATSSSSSSSSSSSSMFFHSPLPSFLVEIASSNKKREKG 180
           RNKAFPDIATLPIRFVLRFVFWATSSSSSSSSSSSSMFFHSPLPSFLVEIASSNKKREKG
Sbjct: 121 RNKAFPDIATLPIRFVLRFVFWATSSSSSSSSSSSSMFFHSPLPSFLVEIASSNKKREKG 180

Query: 181 HATIIGYTNTS 191
           HATIIGYTNTS
Sbjct: 181 HATIIGYTNTS 191

The following BLAST results are available for this feature:
BLAST of Csor.00g241700 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g241700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599539.12.74e-133100.00hypothetical protein SDJN03_09317, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g241700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g241700 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g241700.m01Csor.00g241700.m01mRNA