Csor.00g241540 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g241540
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	V-type proton ATPase subunit F
Location	Csor_Chr04: 12785952 .. 12789821 (+)
RNA-Seq Expression	Csor.00g241540
Synteny	Csor.00g241540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCTGATGAGGTACGTCCAATACATTTCCATATTGCAACAGCTTTTCTTTCTGGGTACCTTAAACTATTAAATTGACTCGAATTTTACTAGGAGTTAATATTCCGTACTTGTTTGATCTTATTGTTATCTGATTTTGGTGTTTGGTTTTCTTTTTACAGATAAACATGTGATCTTATCTTGTATCGTATGTGGTCCAAGTACCTTGTAAACCTGAATCTTAATAGGGTTCTACTTGTACGTGTGTCAAAGCAAATCTGCTAGTTAGTCACGTTTACATTAGTAGTTAGTCTTGAACCCAACAGTAAAATCTTTAGTATTAGTTTTTCTCCGAAACTGTCAAATTTGATAGATAAACATCCATTATTCAATTTTTTTCTTCTGTAATTTTATGTTTATTCTTCAGTTAATTGCCAAATTTCAAGGAAAAATAAAGCATCTGGATAATATTATTAAAAAAAAGAAAAAACATCTACATAATGATAATGATTGGGCTCCAGCTTATTCTGTTGTGTTTTGTATCTTGAACTATGCATGGTTTTTGGTTATACGTTTAATCTGAATTTTCTTTATAACAGGATACGGTGGTTGGATTTCTTCTTGCTGGTGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCTAGTAAGTATACCTCTGATGCAAATATCTTGCAACTCTGATTTTCCATTTCGCTTGTAGCTTTGGCATCCTATTTTGTTAGGCTCACACTTCGTGTCTAAATCGTGTGAAACTTGCTGAAATCCTTGTAATTTAAGTTAGTCCATTTTGAACGTTAGCTTTTCACAAAAATTCCCAGTGATATATATGATATTCTAAATTAGCTCCAAAACTTGTAGTATTCCACTTTGAAACTTAGTTTTGACACATTTAAGGATTTGGGCTAAACCAAGATGAAAAGTTGTTTTCCCTCCAATTTATGTTTTATCATTGCAGAATTTCCTGAAAAAATCATCAGAGCTAAGATGGAATTTGGTAAACGGCGAATACTTTCCCCTAAGTAGTAATTTTGTTTCCCAATTTGACCTATAAGAATATTAAATGGCTATAACAAATCTACGTTTCAAATTAACAAAATATGGTCATATTTTATTATTAAGTCTGAGTGTTTCAATCTTTGTTCATGATAGAATTTTGTTATTATGATATATAAAAATTGTGGTCAGGTGAGACACTCAACTGTGATCGAAGTAGATAAGTCAAAATCCTAATCCTCAGCCCAACGATTGAAGTTTTTGTTGAAGTTGGACTCTTGAATCAAAGAAATTAATACCTTCTTATACAAAATTCGGATCAACCAAGAAACAAAAATCGAATTAGATTACCTCTTAAGATAAAAAATCTAGATGCAAGATTTGAAACTTTTCTCTAAATTGAGTCGTTCCACCATGGAATTTGATCAAGACTTGATTGAATGACTTGAATGCAATCTATCCTAAGAATGACTTGTAATTTTAGAAATGGCAAGAATGATGCTCAAATTTTTTAGGGTGAAAGTCTCAATTTGAGAGCTCATTTCATTCATTTATAATCTCATAATCTTGTTTTTACATGCCATTTTGTGGGTATCTATAGCTTCTCCACAAAAGAAACCCCCAATCATTATGACATGCCATTTTGTGGGTATCTATAGCTTCTCCACAAAAGAAACCCCCAATCCTTTGAATGGCCACTAAAAGAAGTGAGTGGCTATGATTGACAAGTTCTTCCTTCTACCCTTGAAATGCCCACTAAAAAGAGTTATGAAATTAAAATAATAAATAAAGTCTACAAAGAAATTATTGATCAAGTGCTATTTAAGATAACTCTATGTTCCACTTCATCCTTGCAAATCCTAACTTCTAAAGCTCCAAATGGTCTCGTAGATGAAGAAGGAACACTTATTGGATCTTCTTGGCCTTGGATCGTAGGTCCAGTTGAAGCTTGTTGAACACCATGATTCTTATCAAGTTGTCTCAGTCCCTTGATATAAATAAGATAATTTGATGACATAGCTTTCATTTTCATGTTTATGACATAGCTTCTTCATGTTCATGTCCTGGGCTGCTGTAGATATGTACATTAGCATTGGCAGTGTTTAATTTTTTTAGTTAAAAATTTATTTGAAAAATAATTATTCACTGAGTAGGCCAAAAGATTAAAGGGACAAACTATCAAGAGGTTTTGGTTTATTATTATTATTGTTTAATTATCATCATCTCCATTCATTTAGATTTAAAAAAAAAAAAAAAAAAAATTAATTGAAACAAATGTATAAGGGAAGGGCCTTTTGTGTTTCTTTTTTTTTTGGGTTTCTGAGATGGTGTCTCCTCTATGCAATAAAGATATAGAGTCGGAAGTTCATCTTTTCCTTCATTGCTCCTATGCTGAAATTTTTTGGAATTATATTCTTTCCACGTTCAATTGGTTGTGGTCCACCCTTGGACATCAACATTCTATTACCAACAATTTTGGTAGGACTACTTTCATGAGCAAAAAGAAGGGCCTTTGGCTTCAATTCACTAATGTTTTCTGGAGTCTATGGCTTGAAAGGAATGATAGAATCTTCATCAATAAAGAGAAGTCCTTAGATCATTTCTTAAATTCTCTATCATTTTCGACACTTTCTTTGTGTGAACTTATTTCTCCTTTTCCCCATTGGAAATAAATGTTTGCAGTCTTCTTTGGCTAGGGACTAGGGACTTCGCTTTCCTCTTTTATTTTTTATTTTATTTTATTTATTTATTTATTTTGTAATACCATACCTTCTTGTTTCTTATTAAAAAGAAAAAAAGAAATATTCTGCATGAGATACGTGTGTGTGTGATCTAGAATCCAGATTGACCGGCCTAGCACTGGAACCTAGCTCGCATTATACAAAGACCTGCAGTAGTAAATCATCTTTTTGTAGTATAGATAGCTGTTTTTAATATTTGCAAATGAAGTGTATTTAAAATGTTTTCATGTGTAATGTACTGATGTCTCTAAGACAACTTTTGGTTTGATGCCACGTGGCTGATAGCTAAATATCAGTGACCGATGGTGCTGTGATTAAACCAAAAACAAAATTTTCACTACTTGATAGGAATCTGTTCATCTTATTCCATGGGTTTACAGAGCCATTTTGTGTGATGATAGTGTTTTCCATTTATCAAATATGCACTTTGACTTGTCTTTCTATCCTCTTCTTATGTCTCTAAAGTTTAACTCTAACGTCTTAGAGACAACTGTCAAACAAATTGAAGATGCTTTCAAAGAGTTTACAACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTAAGTTGTTTTCTGAATTTCCTTTCTATCCAATGTAAGTATGACTTGTTTTATTGTGACTAAAAGTTTGAGAGTGATTTTGGAATGGTCAAAACCACTTTTGTCACGCCCAAAATCACATGACAAAAGTGATTTTGGTCTAAAATTACTCCCAACACTCCGTTATTGGTTGACTAGTTGCCTTTTCCTTGAACAAAAAATCCTATGAAACCCCTCCCTCCTGTTTTATGGATTAATGCCTATTTGGTGTTCCTATATGTTTACACCTTTCTATTCCTCTGTGGCCCTTAGGAACATCTGCTTTGGTTAAAGTTTTCAATATTTGTTTCATCAAACTGAAACAATTTTTTATTTTTATTTCTTTATTTTTATTTTTATTTCAGGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCGATATTGGAGATTCCTTCCAAGGATCACCCATATGACCCGGCACACGATTCAATTCTGTCCCGAGTGAAGAATCTGTTTTCTACTGAATCGGTGGCATCTGGGAGGCGTTAA

mRNA sequence

ATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGTGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCTAAGACAACTGTCAAACAAATTGAAGATGCTTTCAAAGAGTTTACAACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCGATATTGGAGATTCCTTCCAAGGATCACCCATATGACCCGGCACACGATTCAATTCTGTCCCGAGTGAAGAATCTGTTTTCTACTGAATCGGTGGCATCTGGGAGGCGTTAA

Coding sequence (CDS)

ATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGTGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCTAAGACAACTGTCAAACAAATTGAAGATGCTTTCAAAGAGTTTACAACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCGATATTGGAGATTCCTTCCAAGGATCACCCATATGACCCGGCACACGATTCAATTCTGTCCCGAGTGAAGAATCTGTTTTCTACTGAATCGGTGGCATCTGGGAGGCGTTAA

Protein sequence

MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR

Homology

[Close]

BLAST of Csor.00g241540 vs. ExPASy Swiss-Prot
Match: Q9ZQX4 (V-type proton ATPase subunit F OS=Arabidopsis thaliana OX=3702 GN=VHA-F PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.6e-50
Identity = 95/110 (86.36%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTTV+QIEDAFKEF+ R+DIAI+++SQY
Sbjct: 17  MIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFKEFSARDDIAIILLSQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVA 111
           +ANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LFS ESV+
Sbjct: 77  IANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVS 126

[Close]

BLAST of Csor.00g241540 vs. ExPASy Swiss-Prot
Match: Q23680 (Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans OX=6239 GN=vha-9 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-31
Identity = 64/107 (59.81%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           +I DEDTVVGFLL GVG ++  RK NYLIVD +TTV++IE+AF  F  R+DIAI++I+Q+
Sbjct: 12  VIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDIAIILINQH 71

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTE 108
           +A MIR+ VD++ + IPA+LEIPSK+ PYDP+ DSIL+R + LF+ E
Sbjct: 72  IAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPE 118

[Close]

BLAST of Csor.00g241540 vs. ExPASy Swiss-Prot
Match: Q55AH5 (V-type proton ATPase subunit F OS=Dictyostelium discoideum OX=44689 GN=vatF PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-30
Identity = 63/107 (58.88%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           +I DED V GFLLAGVG  D ++  N+L+VDSKT+  +IE AFK FTTR DIAI+MI+Q 
Sbjct: 14  VIGDEDVVTGFLLAGVGQKDKKKNENFLVVDSKTSQAKIETAFKSFTTRNDIAIIMITQK 73

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTE 108
           VA+ IR+L+D Y++ IP ILEIPSKDHPYDP  DS++ +VK +  ++
Sbjct: 74  VADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKDSVMLKVKKMTGSD 120

[Close]

BLAST of Csor.00g241540 vs. ExPASy Swiss-Prot
Match: Q9D1K2 (V-type proton ATPase subunit F OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-29
Identity = 56/109 (51.38%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           +I DEDTV GFLL G+G ++  R  N+L+V+  TT+ +IED F++F  R+DI I++I+QY
Sbjct: 10  VIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQY 69

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESV 110
           +A M+R  +D++ + IPA+LEIPSK+HPYD A DSIL R K +F+ E +
Sbjct: 70  IAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118

[Close]

BLAST of Csor.00g241540 vs. ExPASy Swiss-Prot
Match: P50408 (V-type proton ATPase subunit F OS=Rattus norvegicus OX=10116 GN=Atp6v1f PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-29
Identity = 56/109 (51.38%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           +I DEDTV GFLL G+G ++  R  N+L+V+  TT+ +IED F++F  R+DI I++I+QY
Sbjct: 10  VIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQY 69

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESV 110
           +A M+R  +D++ + IPA+LEIPSK+HPYD A DSIL R K +F+ E +
Sbjct: 70  IAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118

[Close]

BLAST of Csor.00g241540 vs. NCBI nr
Match: KAG6601751.1 (V-type proton ATPase subunit F, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223 bits (567), Expect = 4.01e-73
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR
Sbjct: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114

[Close]

BLAST of Csor.00g241540 vs. NCBI nr
Match: XP_022930111.1 (V-type proton ATPase subunit F isoform X2 [Cucurbita moschata] >XP_022930112.1 V-type proton ATPase subunit F isoform X2 [Cucurbita moschata] >XP_022961522.1 V-type proton ATPase subunit F [Cucurbita moschata] >XP_022968815.1 V-type proton ATPase subunit F [Cucurbita maxima] >XP_022973615.1 V-type proton ATPase subunit F isoform X1 [Cucurbita maxima] >XP_022973616.1 V-type proton ATPase subunit F isoform X1 [Cucurbita maxima] >XP_023522885.1 V-type proton ATPase subunit F [Cucurbita pepo subsp. pepo] >XP_023553409.1 V-type proton ATPase subunit F isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553415.1 V-type proton ATPase subunit F isoform X1 [Cucurbita pepo subsp. pepo] >KAG7023981.1 V-type proton ATPase subunit F [Cucurbita argyrosperma subsp. argyrosperma] >KAG7032475.1 V-type proton ATPase subunit F, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223 bits (567), Expect = 6.77e-73
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 17  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR
Sbjct: 77  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 130

[Close]

BLAST of Csor.00g241540 vs. NCBI nr
Match: XP_038879624.1 (V-type proton ATPase subunit F [Benincasa hispida])

HSP 1 Score: 222 bits (566), Expect = 9.62e-73
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 17  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLFSTESVASGRR
Sbjct: 77  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTESVASGRR 130

[Close]

BLAST of Csor.00g241540 vs. NCBI nr
Match: KAG6590444.1 (V-type proton ATPase subunit F, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223 bits (567), Expect = 1.45e-72
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 40  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 99

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR
Sbjct: 100 VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 153

[Close]

BLAST of Csor.00g241540 vs. NCBI nr
Match: XP_022150945.1 (V-type proton ATPase subunit F [Momordica charantia])

HSP 1 Score: 221 bits (562), Expect = 3.92e-72
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 17  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFS ESVASGRR
Sbjct: 77  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSAESVASGRR 130

[Close]

BLAST of Csor.00g241540 vs. ExPASy TrEMBL
Match: A0A6J1HY93 (V-type proton ATPase subunit F OS=Cucurbita maxima OX=3661 GN=LOC111467938 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 3.28e-73
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 17  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR
Sbjct: 77  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 130

[Close]

BLAST of Csor.00g241540 vs. ExPASy TrEMBL
Match: A0A6J1EPG5 (V-type proton ATPase subunit F OS=Cucurbita moschata OX=3662 GN=LOC111436591 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 3.28e-73
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 17  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR
Sbjct: 77  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 130

[Close]

BLAST of Csor.00g241540 vs. ExPASy TrEMBL
Match: A0A6J1D9V9 (V-type proton ATPase subunit F OS=Momordica charantia OX=3673 GN=LOC111018975 PE=3 SV=1)

HSP 1 Score: 221 bits (562), Expect = 1.90e-72
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 17  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 114
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFS ESVASGRR
Sbjct: 77  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSAESVASGRR 130

[Close]

BLAST of Csor.00g241540 vs. ExPASy TrEMBL
Match: A0A1S3BQ97 (V-type proton ATPase subunit F OS=Cucumis melo OX=3656 GN=LOC103492049 PE=3 SV=1)

HSP 1 Score: 220 bits (561), Expect = 2.70e-72
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 17  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGR 113
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLFSTESVASGR
Sbjct: 77  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTESVASGR 129

[Close]

BLAST of Csor.00g241540 vs. ExPASy TrEMBL
Match: A0A5A7T9J8 (V-type proton ATPase subunit F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold93G00020 PE=3 SV=1)

HSP 1 Score: 220 bits (561), Expect = 2.70e-72
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY
Sbjct: 17  MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGR 113
           VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLFSTESVASGR
Sbjct: 77  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTESVASGR 129

[Close]

BLAST of Csor.00g241540 vs. TAIR 10
Match: AT4G02620.1 (vacuolar ATPase subunit F family protein )

HSP 1 Score: 199.1 bits (505), Expect = 1.9e-51
Identity = 95/110 (86.36%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQY 60
           MIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTTV+QIEDAFKEF+ R+DIAI+++SQY
Sbjct: 17  MIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFKEFSARDDIAIILLSQY 76

Query: 61  VANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVA 111
           +ANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LFS ESV+
Sbjct: 77  IANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVS 126

The following BLAST results are available for this feature:

BLAST of Csor.00g241540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQX4	2.6e-50	86.36	V-type proton ATPase subunit F OS=Arabidopsis thaliana OX=3702 GN=VHA-F PE=2 SV=...	[more]
Q23680	1.6e-31	59.81	Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans OX=6239 GN=vha...	[more]
Q55AH5	1.4e-30	58.88	V-type proton ATPase subunit F OS=Dictyostelium discoideum OX=44689 GN=vatF PE=3...	[more]
Q9D1K2	1.5e-29	51.38	V-type proton ATPase subunit F OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=2	[more]
P50408	1.5e-29	51.38	V-type proton ATPase subunit F OS=Rattus norvegicus OX=10116 GN=Atp6v1f PE=1 SV=...	[more]

BLAST of Csor.00g241540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601751.1	4.01e-73	100.00	V-type proton ATPase subunit F, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022930111.1	6.77e-73	100.00	V-type proton ATPase subunit F isoform X2 [Cucurbita moschata] >XP_022930112.1 V...	[more]
XP_038879624.1	9.62e-73	99.12	V-type proton ATPase subunit F [Benincasa hispida]	[more]
KAG6590444.1	1.45e-72	100.00	V-type proton ATPase subunit F, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022150945.1	3.92e-72	99.12	V-type proton ATPase subunit F [Momordica charantia]	[more]

BLAST of Csor.00g241540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY93	3.28e-73	100.00	V-type proton ATPase subunit F OS=Cucurbita maxima OX=3661 GN=LOC111467938 PE=3 ...	[more]
A0A6J1EPG5	3.28e-73	100.00	V-type proton ATPase subunit F OS=Cucurbita moschata OX=3662 GN=LOC111436591 PE=...	[more]
A0A6J1D9V9	1.90e-72	99.12	V-type proton ATPase subunit F OS=Momordica charantia OX=3673 GN=LOC111018975 PE...	[more]
A0A1S3BQ97	2.70e-72	99.12	V-type proton ATPase subunit F OS=Cucumis melo OX=3656 GN=LOC103492049 PE=3 SV=1	[more]
A0A5A7T9J8	2.70e-72	99.12	V-type proton ATPase subunit F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Csor.00g241540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02620.1	1.9e-51	86.36	vacuolar ATPase subunit F family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008218	ATPase, V1 complex, subunit F	PFAM	PF01990	ATP-synt_F	coord: 2..100 e-value: 2.7E-29 score: 101.3
IPR005772	ATPase, V1 complex, subunit F, eukaryotic	TIGRFAM	TIGR01101	TIGR01101	coord: 2..108 e-value: 1.4E-48 score: 162.1
IPR005772	ATPase, V1 complex, subunit F, eukaryotic	PIRSF	PIRSF015945	V-ATP_synth_F	coord: 1..107 e-value: 4.0E-50 score: 166.8
IPR036906	ATPase, V1 complex, subunit F superfamily	GENE3D	3.40.50.10580	ATPase, V1 complex, subunit F	coord: 1..106 e-value: 1.7E-43 score: 149.5
IPR036906	ATPase, V1 complex, subunit F superfamily	SUPERFAMILY	159468	AtpF-like	coord: 2..102
None	No IPR available	PANTHER	PTHR13861	VACUOLAR ATP SYNTHASE SUBUNIT F	coord: 1..114
None	No IPR available	PANTHER	PTHR13861:SF12	V-TYPE PROTON ATPASE SUBUNIT F	coord: 1..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g241540.m01	Csor.00g241540.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0033180	proton-transporting V-type ATPase, V1 domain
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism