Csor.00g241460 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTGGATCTCTCTTCTTCTCATATTACTTCATCAACTAAACATCTTCAACGCCAAAATGAATTGCAAATCAATACCAAACATCACATTTTCCTATTCTTCCTCTTCTAACCATCCCTTGACTACAAGGAAAGAACTGGCTAGCAAGGTTGACTTCACTCCCTTTTTTCCCCACCCGCAGCCAAATCGACCCAGAAAGCATTCACGACCCGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTTGATCCGCTCTACGGGGTTGAGAAGCGGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA ATGCTTTGGATCTCTCTTCTTCTCATATTACTTCATCAACTAAACATCTTCAACGCCAAAATGAATTGCAAATCAATACCAAACATCACATTTTCCTATTCTTCCTCTTCTAACCATCCCTTGACTACAAGGAAAGAACTGGCTAGCAAGGTTGACTTCACTCCCTTTTTTCCCCACCCGCAGCCAAATCGACCCAGAAAGCATTCACGACCCGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTTGATCCGCTCTACGGGGTTGAGAAGCGGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA ATGCTTTGGATCTCTCTTCTTCTCATATTACTTCATCAACTAAACATCTTCAACGCCAAAATGAATTGCAAATCAATACCAAACATCACATTTTCCTATTCTTCCTCTTCTAACCATCCCTTGACTACAAGGAAAGAACTGGCTAGCAAGGTTGACTTCACTCCCTTTTTTCCCCACCCGCAGCCAAATCGACCCAGAAAGCATTCACGACCCGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTTGATCCGCTCTACGGGGTTGAGAAGCGGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA MLWISLLLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKELASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN Homology
BLAST of Csor.00g241460 vs. ExPASy Swiss-Prot
Match: Q29PU4 (CLAVATA3/ESR (CLE)-related protein 12 OS=Arabidopsis thaliana OX=3702 GN=CLE12 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09 Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of Csor.00g241460 vs. ExPASy Swiss-Prot
Match: Q6NMF0 (CLAVATA3/ESR (CLE)-related protein 13 OS=Arabidopsis thaliana OX=3702 GN=CLE13 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04 Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of Csor.00g241460 vs. ExPASy Swiss-Prot
Match: Q9FZE4 (CLAVATA3/ESR (CLE)-related protein 9 OS=Arabidopsis thaliana OX=3702 GN=CLE9 PE=2 SV=2) HSP 1 Score: 44.3 bits (103), Expect = 1.0e-03 Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 0
BLAST of Csor.00g241460 vs. NCBI nr
Match: KAG6601759.1 (CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 217 bits (552), Expect = 4.01e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Csor.00g241460 vs. NCBI nr
Match: KAG7032483.1 (CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 182 bits (462), Expect = 1.16e-57 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Csor.00g241460 vs. NCBI nr
Match: XP_023903065.1 (CLAVATA3/ESR (CLE)-related protein 12 [Quercus suber]) HSP 1 Score: 96.3 bits (238), Expect = 4.13e-23 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 0
BLAST of Csor.00g241460 vs. NCBI nr
Match: KAF3958485.1 (hypothetical protein CMV_016625 [Castanea mollissima]) HSP 1 Score: 94.4 bits (233), Expect = 2.64e-22 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of Csor.00g241460 vs. NCBI nr
Match: XP_021300415.1 (CLAVATA3/ESR (CLE)-related protein 12-like [Herrania umbratica]) HSP 1 Score: 94.0 bits (232), Expect = 2.84e-22 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of Csor.00g241460 vs. ExPASy TrEMBL
Match: A0A0A0KPQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G577440 PE=3 SV=1) HSP 1 Score: 144 bits (363), Expect = 1.87e-42 Identity = 74/106 (69.81%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of Csor.00g241460 vs. ExPASy TrEMBL
Match: A0A7N2KK79 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 4.68e-24 Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of Csor.00g241460 vs. ExPASy TrEMBL
Match: A0A2N9J7P0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60537 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.40e-23 Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = 0
BLAST of Csor.00g241460 vs. ExPASy TrEMBL
Match: A0A6J1BM88 (CLAVATA3/ESR (CLE)-related protein 12-like OS=Herrania umbratica OX=108875 GN=LOC110428821 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.38e-22 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of Csor.00g241460 vs. ExPASy TrEMBL
Match: A0A061EC34 (Clavata3/esr-related 12, putative OS=Theobroma cacao OX=3641 GN=TCM_011877 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 5.56e-22 Identity = 54/105 (51.43%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of Csor.00g241460 vs. TAIR 10
Match: AT1G68795.1 (CLAVATA3/ESR-RELATED 12 ) HSP 1 Score: 62.4 bits (150), Expect = 2.5e-10 Identity = 43/109 (39.45%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of Csor.00g241460 vs. TAIR 10
Match: AT1G73965.1 (CLAVATA3/ESR-RELATED 13 ) HSP 1 Score: 45.4 bits (106), Expect = 3.2e-05 Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of Csor.00g241460 vs. TAIR 10
Match: AT1G26600.1 (CLAVATA3/ESR-RELATED 9 ) HSP 1 Score: 44.3 bits (103), Expect = 7.1e-05 Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 0
BLAST of Csor.00g241460 vs. TAIR 10
Match: AT1G69320.1 (CLAVATA3/ESR-RELATED 10 ) HSP 1 Score: 41.6 bits (96), Expect = 4.6e-04 Identity = 20/40 (50.00%), Postives = 23/40 (57.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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