Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAGCCCCAACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACTCCTTTGCAGGTAGCGCCGTTGCCGACTCCACCAACGCCGGTGCCTTCACAGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATGAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATGATAGTACAGCACCAGCGCCATCACCAAATCTGGTAAGCAAAGTATGA
mRNA sequence
ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAGCCCCAACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACTCCTTTGCAGGTAGCGCCGTTGCCGACTCCACCAACGCCGGTGCCTTCACAGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATGAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATGATAGTACAGCACCAGCGCCATCACCAAATCTGGTAAGCAAAGTATGA
Coding sequence (CDS)
ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAGCCCCAACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACTCCTTTGCAGGTAGCGCCGTTGCCGACTCCACCAACGCCGGTGCCTTCACAGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATGAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATGATAGTACAGCACCAGCGCCATCACCAAATCTGGTAAGCAAAGTATGA
Protein sequence
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTVVDSQDDSTAPAPSPNLVSKV
Homology
BLAST of Csor.00g241410 vs. ExPASy Swiss-Prot
Match:
Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)
HSP 1 Score: 88.2 bits (217), Expect = 1.1e-16
Identity = 92/171 (53.80%), Postives = 106/171 (61.99%), Query Frame = 0
Query: 29 PSLPTATPP--PSTPPPTITIT-PPPNVAAPSIAPTIPPPQPPQTPPVSTPSLPPVLPPP 88
P + A PP P TPPP +T T PP AP I+P PPPQPPQ+PP S P+ + PP
Sbjct: 59 PPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPT----VSPP 118
Query: 89 PVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPA 148
PV+PPP P P P PPP PA SP P AP PP PV P+ AP + L PA
Sbjct: 119 PVSPPPAPTSPPPTPASPPPAPA---SPPP---APASPPPAPVSPPPVQAPSPI-SLPPA 178
Query: 149 PAPGKHKHRRRHKHKK-HEAPAPAPAVPSPPAPPTVVDSQDDSTAPAPSPN 196
PAP KH+R+HKHK+ H APAPAP PSPP+PP + D QD TAPAPSPN
Sbjct: 179 PAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSPPVLTDPQD--TAPAPSPN 216
BLAST of Csor.00g241410 vs. NCBI nr
Match:
KAG6601764.1 (hypothetical protein SDJN03_06997, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 333 bits (855), Expect = 3.04e-114
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
Query: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV
Sbjct: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
Query: 181 VDSQDDSTAPAPSPNLVSKV 200
VDSQDDSTAPAPSPNLVSKV
Sbjct: 181 VDSQDDSTAPAPSPNLVSKV 200
BLAST of Csor.00g241410 vs. NCBI nr
Match:
XP_023514677.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 320 bits (821), Expect = 1.18e-108
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
TIPPPQPPQTPPVSTPSLPP LPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPALPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
Query: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
LPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPAVPSPPAPPTV
Sbjct: 121 LPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTV 180
Query: 181 VDSQDDSTAPAPSPNL 196
VDSQDDSTAPAPSPNL
Sbjct: 181 VDSQDDSTAPAPSPNL 196
BLAST of Csor.00g241410 vs. NCBI nr
Match:
XP_022930065.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita moschata])
HSP 1 Score: 318 bits (816), Expect = 6.81e-108
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
MASKSC LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP
Sbjct: 1 MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
TIPPPQPPQTPPVSTPSLPPV PPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVFPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
Query: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
LPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPAVPSPPAPPTV
Sbjct: 121 LPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTV 180
Query: 181 VDSQDDSTAPAPSPNL 196
VDSQDDSTAPAPSPNL
Sbjct: 181 VDSQDDSTAPAPSPNL 196
BLAST of Csor.00g241410 vs. NCBI nr
Match:
XP_022974214.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita maxima])
HSP 1 Score: 307 bits (787), Expect = 2.41e-103
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPP----------LPAPQ 120
TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPP LPAPQ
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
Query: 121 ISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPA 180
ISPTPLQ+APLPTPPTPVPS+PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPA
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 181 VPSPPAPPTVVDSQDDSTAPAPSPNL 196
VPSPPAPPTVVDSQD STAPAPSPNL
Sbjct: 181 VPSPPAPPTVVDSQD-STAPAPSPNL 205
BLAST of Csor.00g241410 vs. NCBI nr
Match:
XP_038875574.1 (lysine-rich arabinogalactan protein 19-like [Benincasa hispida])
HSP 1 Score: 224 bits (570), Expect = 1.62e-70
Identity = 149/209 (71.29%), Postives = 159/209 (76.08%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
MASKS P VICL FLFP AI QAP QPP+LPT +PPPSTPPPT+T TPPP V A
Sbjct: 1 MASKSWPFSVICLGFLFPFAIGQAPVQPPTLPTVSPPPSTPPPTVTTPPPLSTPPPTVVA 60
Query: 61 PSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTP 120
PS +PTIPPPQPP +STPSLPP L PPPPATPPPLPPPLP PQ+SPTP
Sbjct: 61 PSTSPTIPPPQPP----ISTPSLPPAL----------PPPPATPPPLPPPLPPPQVSPTP 120
Query: 121 LQVAPLP--------TPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAP 180
Q P+P TPPTP+PS P AP+AVPELAPAPAPGKHKHRR HKHKKH+APAP
Sbjct: 121 SQAPPVPAPTLAPLLTPPTPMPSPPTPAPIAVPELAPAPAPGKHKHRRHHKHKKHQAPAP 180
Query: 181 APAVPSPPAPPTVVDSQDDSTAPAPSPNL 196
AP VPSPPAPPTVVDSQD STAPAPSPNL
Sbjct: 181 APTVPSPPAPPTVVDSQD-STAPAPSPNL 194
BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match:
A0A6J1EVZ4 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111436552 PE=4 SV=1)
HSP 1 Score: 318 bits (816), Expect = 3.30e-108
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
MASKSC LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP
Sbjct: 1 MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
TIPPPQPPQTPPVSTPSLPPV PPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVFPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
Query: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
LPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPAVPSPPAPPTV
Sbjct: 121 LPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTV 180
Query: 181 VDSQDDSTAPAPSPNL 196
VDSQDDSTAPAPSPNL
Sbjct: 181 VDSQDDSTAPAPSPNL 196
BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match:
A0A6J1IGY8 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111472835 PE=4 SV=1)
HSP 1 Score: 307 bits (787), Expect = 1.17e-103
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60
Query: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPP----------LPAPQ 120
TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPP LPAPQ
Sbjct: 61 TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120
Query: 121 ISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPA 180
ISPTPLQ+APLPTPPTPVPS+PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPA
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180
Query: 181 VPSPPAPPTVVDSQDDSTAPAPSPNL 196
VPSPPAPPTVVDSQD STAPAPSPNL
Sbjct: 181 VPSPPAPPTVVDSQD-STAPAPSPNL 205
BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match:
A0A0A0LHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1)
HSP 1 Score: 209 bits (533), Expect = 5.47e-65
Identity = 145/211 (68.72%), Postives = 156/211 (73.93%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
MASKS VICLAFLF + +QAPAQPPSLPT +PPP+TPPPT+ TPPP V A
Sbjct: 15 MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74
Query: 61 PSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTP 120
PS +PTIPPPQ + PVSTPSLPP L PPPPATPPPLPPPLP PQ+SPTP
Sbjct: 75 PSTSPTIPPPQ---SSPVSTPSLPPAL----------PPPPATPPPLPPPLPPPQVSPTP 134
Query: 121 LQVAP----------LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAP 180
L P LPTPPTP PS P APVA PE +PAPAPGKHKHRRRHKHKKH+AP
Sbjct: 135 LPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAP 194
Query: 181 APAPAVPSPPAPPTVVDSQDDSTAPAPSPNL 196
APAP VPSPPAPPTVVDSQD STAPAPSP+L
Sbjct: 195 APAPTVPSPPAPPTVVDSQD-STAPAPSPDL 211
BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match:
A0A1S3C506 (lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 PE=4 SV=1)
HSP 1 Score: 203 bits (516), Expect = 1.33e-62
Identity = 144/211 (68.25%), Postives = 153/211 (72.51%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
MASK VICLAFLF AI+QAPAQPPSLPT +PPPSTPPPT+ TPPP V A
Sbjct: 1 MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60
Query: 61 PSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTP 120
PS +P IPPPQ + PVSTPSLPP PPPPATPPPLPPPLP PQ+SP P
Sbjct: 61 PSTSPAIPPPQ---SSPVSTPSLPPAF----------PPPPATPPPLPPPLPPPQVSPIP 120
Query: 121 LQVAP----------LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAP 180
L P LPT PTP PS P APVA PEL+PAPAPGKHKHRRRHKHKKH+AP
Sbjct: 121 LPTPPVLAPTLAPLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAP 180
Query: 181 APAPAVPSPPAPPTVVDSQDDSTAPAPSPNL 196
APAP VPSPPAPPTVVDSQD STAPAPSP+L
Sbjct: 181 APAPTVPSPPAPPTVVDSQD-STAPAPSPDL 197
BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match:
A0A6J1DYJ7 (lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC111025417 PE=4 SV=1)
HSP 1 Score: 195 bits (496), Expect = 1.46e-59
Identity = 141/212 (66.51%), Postives = 154/212 (72.64%), Query Frame = 0
Query: 1 MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPST------PPPTITITPPPNVA 60
MASKS P+LVI LAFLF AI QAPAQPPSLPT + PPST PP ++ TPPPNV
Sbjct: 1 MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60
Query: 61 APSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPT 120
APS +PT+PPPQPPQ PVSTPSLPP LPPPP TPPPLPPP PQ+SPT
Sbjct: 61 APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLPPP-------------PQVSPT 120
Query: 121 PLQ--------VAPLPTPPTPVPSQPMLAPVAVPEL--APAPAPGKHKHRRRHKHKKHEA 180
P Q +APLP PP P+P P APVA P L +PAPAPGKH+H+R HKHKKH A
Sbjct: 121 PAQAPSVPAPTLAPLPNPPAPLPPPPTPAPVAAPVLVPSPAPAPGKHRHKRHHKHKKHPA 180
Query: 181 PAPAPAVPSPPAPPTVVDSQDDSTAPAPSPNL 196
PAPAP +PSPPAPPTVVDSQD STAPAPSPNL
Sbjct: 181 PAPAPTMPSPPAPPTVVDSQD-STAPAPSPNL 198
BLAST of Csor.00g241410 vs. TAIR 10
Match:
AT1G68725.1 (arabinogalactan protein 19 )
HSP 1 Score: 88.2 bits (217), Expect = 8.2e-18
Identity = 92/171 (53.80%), Postives = 106/171 (61.99%), Query Frame = 0
Query: 29 PSLPTATPP--PSTPPPTITIT-PPPNVAAPSIAPTIPPPQPPQTPPVSTPSLPPVLPPP 88
P + A PP P TPPP +T T PP AP I+P PPPQPPQ+PP S P+ + PP
Sbjct: 59 PPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPT----VSPP 118
Query: 89 PVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPA 148
PV+PPP P P P PPP PA SP P AP PP PV P+ AP + L PA
Sbjct: 119 PVSPPPAPTSPPPTPASPPPAPA---SPPP---APASPPPAPVSPPPVQAPSPI-SLPPA 178
Query: 149 PAPGKHKHRRRHKHKK-HEAPAPAPAVPSPPAPPTVVDSQDDSTAPAPSPN 196
PAP KH+R+HKHK+ H APAPAP PSPP+PP + D QD TAPAPSPN
Sbjct: 179 PAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSPPVLTDPQD--TAPAPSPN 216
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9S740 | 1.1e-16 | 53.80 | Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ... | [more] |
Match Name | E-value | Identity | Description | |
KAG6601764.1 | 3.04e-114 | 100.00 | hypothetical protein SDJN03_06997, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023514677.1 | 1.18e-108 | 97.96 | lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022930065.1 | 6.81e-108 | 97.96 | lysine-rich arabinogalactan protein 19-like [Cucurbita moschata] | [more] |
XP_022974214.1 | 2.41e-103 | 92.72 | lysine-rich arabinogalactan protein 19-like [Cucurbita maxima] | [more] |
XP_038875574.1 | 1.62e-70 | 71.29 | lysine-rich arabinogalactan protein 19-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EVZ4 | 3.30e-108 | 97.96 | lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1IGY8 | 1.17e-103 | 92.72 | lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A0A0LHJ4 | 5.47e-65 | 68.72 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1 | [more] |
A0A1S3C506 | 1.33e-62 | 68.25 | lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 P... | [more] |
A0A6J1DYJ7 | 1.46e-59 | 66.51 | lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
Match Name | E-value | Identity | Description | |
AT1G68725.1 | 8.2e-18 | 53.80 | arabinogalactan protein 19 | [more] |