Csor.00g241410 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g241410
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionlysine-rich arabinogalactan protein 19-like
LocationCsor_Chr04: 13318219 .. 13318821 (-)
RNA-Seq ExpressionCsor.00g241410
SyntenyCsor.00g241410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAGCCCCAACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACTCCTTTGCAGGTAGCGCCGTTGCCGACTCCACCAACGCCGGTGCCTTCACAGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATGAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATGATAGTACAGCACCAGCGCCATCACCAAATCTGGTAAGCAAAGTATGA

mRNA sequence

ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAGCCCCAACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACTCCTTTGCAGGTAGCGCCGTTGCCGACTCCACCAACGCCGGTGCCTTCACAGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATGAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATGATAGTACAGCACCAGCGCCATCACCAAATCTGGTAAGCAAAGTATGA

Coding sequence (CDS)

ATGGCTTCCAAATCATGCCCTCTTTTGGTCATCTGCCTTGCCTTTTTATTCCCTCTAGCCATCAGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCAACGCCACCGCCATCCACCCCGCCACCTACCATAACAATTACACCACCCCCTAATGTTGCTGCACCATCAATAGCCCCAACTATCCCACCACCCCAACCGCCTCAAACCCCACCTGTCTCCACCCCGTCTCTGCCTCCGGTATTGCCACCTCCACCTGTTACTCCTCCACCATTGCCACCTCCTCCTGCTACTCCTCCGCCATTGCCACCTCCTTTACCGGCGCCACAGATCTCTCCAACTCCTTTGCAGGTAGCGCCGTTGCCGACTCCACCAACGCCGGTGCCTTCACAGCCAATGCTAGCTCCGGTTGCAGTGCCAGAGTTAGCCCCTGCACCAGCTCCGGGAAAGCATAAGCATAGAAGGCGTCACAAACATAAAAAGCATGAAGCCCCAGCCCCAGCCCCAGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAGGATGATAGTACAGCACCAGCGCCATCACCAAATCTGGTAAGCAAAGTATGA

Protein sequence

MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTVVDSQDDSTAPAPSPNLVSKV
Homology
BLAST of Csor.00g241410 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-16
Identity = 92/171 (53.80%), Postives = 106/171 (61.99%), Query Frame = 0

Query: 29  PSLPTATPP--PSTPPPTITIT-PPPNVAAPSIAPTIPPPQPPQTPPVSTPSLPPVLPPP 88
           P +  A PP  P TPPP +T T PP    AP I+P  PPPQPPQ+PP S P+    + PP
Sbjct: 59  PPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPT----VSPP 118

Query: 89  PVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPA 148
           PV+PPP P  P   P  PPP PA   SP P   AP   PP PV   P+ AP  +  L PA
Sbjct: 119 PVSPPPAPTSPPPTPASPPPAPA---SPPP---APASPPPAPVSPPPVQAPSPI-SLPPA 178

Query: 149 PAPGKHKHRRRHKHKK-HEAPAPAPAVPSPPAPPTVVDSQDDSTAPAPSPN 196
           PAP   KH+R+HKHK+ H APAPAP  PSPP+PP + D QD  TAPAPSPN
Sbjct: 179 PAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSPPVLTDPQD--TAPAPSPN 216

BLAST of Csor.00g241410 vs. NCBI nr
Match: KAG6601764.1 (hypothetical protein SDJN03_06997, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333 bits (855), Expect = 3.04e-114
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
           MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
           TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120

Query: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
           LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV
Sbjct: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180

Query: 181 VDSQDDSTAPAPSPNLVSKV 200
           VDSQDDSTAPAPSPNLVSKV
Sbjct: 181 VDSQDDSTAPAPSPNLVSKV 200

BLAST of Csor.00g241410 vs. NCBI nr
Match: XP_023514677.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (821), Expect = 1.18e-108
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
           MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
           TIPPPQPPQTPPVSTPSLPP LPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPALPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120

Query: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
           LPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPAVPSPPAPPTV
Sbjct: 121 LPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTV 180

Query: 181 VDSQDDSTAPAPSPNL 196
           VDSQDDSTAPAPSPNL
Sbjct: 181 VDSQDDSTAPAPSPNL 196

BLAST of Csor.00g241410 vs. NCBI nr
Match: XP_022930065.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita moschata])

HSP 1 Score: 318 bits (816), Expect = 6.81e-108
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
           MASKSC LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP
Sbjct: 1   MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
           TIPPPQPPQTPPVSTPSLPPV PPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVFPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120

Query: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
           LPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPAVPSPPAPPTV
Sbjct: 121 LPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTV 180

Query: 181 VDSQDDSTAPAPSPNL 196
           VDSQDDSTAPAPSPNL
Sbjct: 181 VDSQDDSTAPAPSPNL 196

BLAST of Csor.00g241410 vs. NCBI nr
Match: XP_022974214.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita maxima])

HSP 1 Score: 307 bits (787), Expect = 2.41e-103
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
           MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPP----------LPAPQ 120
           TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPP          LPAPQ
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120

Query: 121 ISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPA 180
           ISPTPLQ+APLPTPPTPVPS+PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPA
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 181 VPSPPAPPTVVDSQDDSTAPAPSPNL 196
           VPSPPAPPTVVDSQD STAPAPSPNL
Sbjct: 181 VPSPPAPPTVVDSQD-STAPAPSPNL 205

BLAST of Csor.00g241410 vs. NCBI nr
Match: XP_038875574.1 (lysine-rich arabinogalactan protein 19-like [Benincasa hispida])

HSP 1 Score: 224 bits (570), Expect = 1.62e-70
Identity = 149/209 (71.29%), Postives = 159/209 (76.08%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
           MASKS P  VICL FLFP AI QAP QPP+LPT +PPPSTPPPT+T      TPPP V A
Sbjct: 1   MASKSWPFSVICLGFLFPFAIGQAPVQPPTLPTVSPPPSTPPPTVTTPPPLSTPPPTVVA 60

Query: 61  PSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTP 120
           PS +PTIPPPQPP    +STPSLPP L          PPPPATPPPLPPPLP PQ+SPTP
Sbjct: 61  PSTSPTIPPPQPP----ISTPSLPPAL----------PPPPATPPPLPPPLPPPQVSPTP 120

Query: 121 LQVAPLP--------TPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAP 180
            Q  P+P        TPPTP+PS P  AP+AVPELAPAPAPGKHKHRR HKHKKH+APAP
Sbjct: 121 SQAPPVPAPTLAPLLTPPTPMPSPPTPAPIAVPELAPAPAPGKHKHRRHHKHKKHQAPAP 180

Query: 181 APAVPSPPAPPTVVDSQDDSTAPAPSPNL 196
           AP VPSPPAPPTVVDSQD STAPAPSPNL
Sbjct: 181 APTVPSPPAPPTVVDSQD-STAPAPSPNL 194

BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match: A0A6J1EVZ4 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111436552 PE=4 SV=1)

HSP 1 Score: 318 bits (816), Expect = 3.30e-108
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
           MASKSC LLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP
Sbjct: 1   MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120
           TIPPPQPPQTPPVSTPSLPPV PPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVFPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAP 120

Query: 121 LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPAVPSPPAPPTV 180
           LPTPPTPVPS PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPAVPSPPAPPTV
Sbjct: 121 LPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTV 180

Query: 181 VDSQDDSTAPAPSPNL 196
           VDSQDDSTAPAPSPNL
Sbjct: 181 VDSQDDSTAPAPSPNL 196

BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match: A0A6J1IGY8 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111472835 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 1.17e-103
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSIAP 60
           MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSI P
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITPPPNVAAPSITP 60

Query: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPP----------LPAPQ 120
           TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPP          LPAPQ
Sbjct: 61  TIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATPPPLPPPLPAPQ 120

Query: 121 ISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAPAPAPA 180
           ISPTPLQ+APLPTPPTPVPS+PMLAPVAVPELAPAPAPGKHKHRRRHKHKKH+APAPAPA
Sbjct: 121 ISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPAPA 180

Query: 181 VPSPPAPPTVVDSQDDSTAPAPSPNL 196
           VPSPPAPPTVVDSQD STAPAPSPNL
Sbjct: 181 VPSPPAPPTVVDSQD-STAPAPSPNL 205

BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match: A0A0A0LHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 5.47e-65
Identity = 145/211 (68.72%), Postives = 156/211 (73.93%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
           MASKS    VICLAFLF  + +QAPAQPPSLPT +PPP+TPPPT+       TPPP V A
Sbjct: 15  MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74

Query: 61  PSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTP 120
           PS +PTIPPPQ   + PVSTPSLPP L          PPPPATPPPLPPPLP PQ+SPTP
Sbjct: 75  PSTSPTIPPPQ---SSPVSTPSLPPAL----------PPPPATPPPLPPPLPPPQVSPTP 134

Query: 121 LQVAP----------LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAP 180
           L   P          LPTPPTP PS P  APVA PE +PAPAPGKHKHRRRHKHKKH+AP
Sbjct: 135 LPTPPVLAPTLAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAP 194

Query: 181 APAPAVPSPPAPPTVVDSQDDSTAPAPSPNL 196
           APAP VPSPPAPPTVVDSQD STAPAPSP+L
Sbjct: 195 APAPTVPSPPAPPTVVDSQD-STAPAPSPDL 211

BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match: A0A1S3C506 (lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 PE=4 SV=1)

HSP 1 Score: 203 bits (516), Expect = 1.33e-62
Identity = 144/211 (68.25%), Postives = 153/211 (72.51%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITI-----TPPPNVAA 60
           MASK     VICLAFLF  AI+QAPAQPPSLPT +PPPSTPPPT+       TPPP V A
Sbjct: 1   MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60

Query: 61  PSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTP 120
           PS +P IPPPQ   + PVSTPSLPP            PPPPATPPPLPPPLP PQ+SP P
Sbjct: 61  PSTSPAIPPPQ---SSPVSTPSLPPAF----------PPPPATPPPLPPPLPPPQVSPIP 120

Query: 121 LQVAP----------LPTPPTPVPSQPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHEAP 180
           L   P          LPT PTP PS P  APVA PEL+PAPAPGKHKHRRRHKHKKH+AP
Sbjct: 121 LPTPPVLAPTLAPLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAP 180

Query: 181 APAPAVPSPPAPPTVVDSQDDSTAPAPSPNL 196
           APAP VPSPPAPPTVVDSQD STAPAPSP+L
Sbjct: 181 APAPTVPSPPAPPTVVDSQD-STAPAPSPDL 197

BLAST of Csor.00g241410 vs. ExPASy TrEMBL
Match: A0A6J1DYJ7 (lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC111025417 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 1.46e-59
Identity = 141/212 (66.51%), Postives = 154/212 (72.64%), Query Frame = 0

Query: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPST------PPPTITITPPPNVA 60
           MASKS P+LVI LAFLF  AI QAPAQPPSLPT + PPST       PP ++ TPPPNV 
Sbjct: 1   MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60

Query: 61  APSIAPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPLPAPQISPT 120
           APS +PT+PPPQPPQ  PVSTPSLPP LPPPP TPPPLPPP             PQ+SPT
Sbjct: 61  APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLPPP-------------PQVSPT 120

Query: 121 PLQ--------VAPLPTPPTPVPSQPMLAPVAVPEL--APAPAPGKHKHRRRHKHKKHEA 180
           P Q        +APLP PP P+P  P  APVA P L  +PAPAPGKH+H+R HKHKKH A
Sbjct: 121 PAQAPSVPAPTLAPLPNPPAPLPPPPTPAPVAAPVLVPSPAPAPGKHRHKRHHKHKKHPA 180

Query: 181 PAPAPAVPSPPAPPTVVDSQDDSTAPAPSPNL 196
           PAPAP +PSPPAPPTVVDSQD STAPAPSPNL
Sbjct: 181 PAPAPTMPSPPAPPTVVDSQD-STAPAPSPNL 198

BLAST of Csor.00g241410 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 88.2 bits (217), Expect = 8.2e-18
Identity = 92/171 (53.80%), Postives = 106/171 (61.99%), Query Frame = 0

Query: 29  PSLPTATPP--PSTPPPTITIT-PPPNVAAPSIAPTIPPPQPPQTPPVSTPSLPPVLPPP 88
           P +  A PP  P TPPP +T T PP    AP I+P  PPPQPPQ+PP S P+    + PP
Sbjct: 59  PPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPT----VSPP 118

Query: 89  PVTPPPLPPPPATPPPLPPPLPAPQISPTPLQVAPLPTPPTPVPSQPMLAPVAVPELAPA 148
           PV+PPP P  P   P  PPP PA   SP P   AP   PP PV   P+ AP  +  L PA
Sbjct: 119 PVSPPPAPTSPPPTPASPPPAPA---SPPP---APASPPPAPVSPPPVQAPSPI-SLPPA 178

Query: 149 PAPGKHKHRRRHKHKK-HEAPAPAPAVPSPPAPPTVVDSQDDSTAPAPSPN 196
           PAP   KH+R+HKHK+ H APAPAP  PSPP+PP + D QD  TAPAPSPN
Sbjct: 179 PAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSPPVLTDPQD--TAPAPSPN 216

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9S7401.1e-1653.80Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ... [more]
Match NameE-valueIdentityDescription
KAG6601764.13.04e-114100.00hypothetical protein SDJN03_06997, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023514677.11.18e-10897.96lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo][more]
XP_022930065.16.81e-10897.96lysine-rich arabinogalactan protein 19-like [Cucurbita moschata][more]
XP_022974214.12.41e-10392.72lysine-rich arabinogalactan protein 19-like [Cucurbita maxima][more]
XP_038875574.11.62e-7071.29lysine-rich arabinogalactan protein 19-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1EVZ43.30e-10897.96lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1IGY81.17e-10392.72lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A0A0LHJ45.47e-6568.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1[more]
A0A1S3C5061.33e-6268.25lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 P... [more]
A0A6J1DYJ71.46e-5966.51lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
Match NameE-valueIdentityDescription
AT1G68725.18.2e-1853.80arabinogalactan protein 19 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 196..200
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 55..72
score: 37.78
coord: 75..100
score: 44.62
coord: 38..54
score: 34.12
coord: 16..37
score: 24.55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..200
NoneNo IPR availablePANTHERPTHR36549:SF3LYSINE-RICH ARABINOGALACTAN PROTEIN 19coord: 24..196
IPR038793Lysine-rich arabinogalactan protein 19PANTHERPTHR36549LYSINE-RICH ARABINOGALACTAN PROTEIN 19coord: 24..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g241410.m01Csor.00g241410.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005886 plasma membrane